RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 NRXN3Q9Y4C0 1643 aa9.95□□□□□ -0.82
CTR9-202ENST00000524523 KNDC1Q76NI1 1749 aa9.95□□□□□ -0.82
CTR9-202ENST00000524523 MINK1Q8N4C8 1332 aaPredicted RBP9.94□□□□□ -0.82
CTR9-202ENST00000524523 METTL3Q86U44 580 aaKnown RBP9.94□□□□□ -0.82
CTR9-202ENST00000524523 C3P01024 1663 aa9.93□□□□□ -0.82
CTR9-202ENST00000524523 CPSF1Q10570 1443 aaKnown RBP9.93□□□□□ -0.82
CTR9-202ENST00000524523 PTCH1Q13635 1447 aa9.93□□□□□ -0.82
CTR9-202ENST00000524523 A0A1W2PP64 1363 aa9.93□□□□□ -0.82
CTR9-202ENST00000524523 FYB1O15117 783 aa9.93□□□□□ -0.82
CTR9-202ENST00000524523 MAP2K5Q13163 448 aa9.93□□□□□ -0.82
CTR9-202ENST00000524523 PNNQ9H307 717 aaKnown RBP9.93□□□□□ -0.82
CTR9-202ENST00000524523 TMEM134Q9H6X4 195 aa9.93□□□□□ -0.82
CTR9-202ENST00000524523 PLEKHG3A1L390 1219 aa9.92□□□□□ -0.82
CTR9-202ENST00000524523 CEBPAP49715 358 aaPredicted RBP9.92□□□□□ -0.82
CTR9-202ENST00000524523 CNGB1Q14028 1251 aaPredicted RBP9.92□□□□□ -0.82
CTR9-202ENST00000524523 WAPLQ7Z5K2 1190 aa9.92□□□□□ -0.82
CTR9-202ENST00000524523 ANKLE2Q86XL3 938 aa9.92□□□□□ -0.82
CTR9-202ENST00000524523 CABP1Q9NZU7 370 aa9.92□□□□□ -0.82
CTR9-202ENST00000524523 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
CTR9-202ENST00000524523 EDC4Q6P2E9 1401 aaKnown RBP9.91□□□□□ -0.82
CTR9-202ENST00000524523 FER1L4A9Z1Z3 1794 aa9.91□□□□□ -0.82
CTR9-202ENST00000524523 ZNF521Q96K83 1311 aa9.91□□□□□ -0.82
CTR9-202ENST00000524523 CCDC27Q2M243 656 aa9.91□□□□□ -0.82
CTR9-202ENST00000524523 NUDT16Q96DE0 195 aaKnown RBP9.91□□□□□ -0.82
CTR9-202ENST00000524523 ADGRB2O60241 1585 aa9.91□□□□□ -0.82
CTR9-202ENST00000524523 PNPLA6Q8IY17 1366 aa9.9□□□□□ -0.82
CTR9-202ENST00000524523 SETD1BQ9UPS6 1966 aaKnown RBP9.9□□□□□ -0.82
CTR9-202ENST00000524523 CDC42BPGQ6DT37 1551 aa9.9□□□□□ -0.82
CTR9-202ENST00000524523 MTHFSP49914 203 aa9.9□□□□□ -0.82
CTR9-202ENST00000524523 SAFB2Q14151 953 aaKnown RBP eCLIP9.9□□□□□ -0.82
CTR9-202ENST00000524523 AATKQ6ZMQ8 1374 aa9.89□□□□□ -0.83
CTR9-202ENST00000524523 IRF6O14896 467 aa9.89□□□□□ -0.83
CTR9-202ENST00000524523 TRMT2AQ8IZ69 625 aaKnown RBP9.89□□□□□ -0.83
CTR9-202ENST00000524523 ZC3H15Q8WU90 426 aaKnown RBP9.89□□□□□ -0.83
CTR9-202ENST00000524523 RUNDC1Q96C34 613 aa9.89□□□□□ -0.83
CTR9-202ENST00000524523 PPP4R2Q9NY27 417 aa9.89□□□□□ -0.83
CTR9-202ENST00000524523 PLA2G2EQ9NZK7 142 aa9.89□□□□□ -0.83
CTR9-202ENST00000524523 AMOTL2Q9Y2J4 779 aa9.89□□□□□ -0.83
CTR9-202ENST00000524523 ADAMTSL3P82987 1691 aa9.89□□□□□ -0.83
CTR9-202ENST00000524523 ROBO2Q9HCK4 1378 aa9.88□□□□□ -0.83
CTR9-202ENST00000524523 PLEKHH1Q9ULM0 1364 aa9.88□□□□□ -0.83
CTR9-202ENST00000524523 KRI1Q8N9T8 703 aaKnown RBP9.88□□□□□ -0.83
CTR9-202ENST00000524523 E9PSI1 815 aa9.87□□□□□ -0.83
CTR9-202ENST00000524523 WDR63Q8IWG1 891 aa9.87□□□□□ -0.83
CTR9-202ENST00000524523 RCAN3Q9UKA8 241 aa9.87□□□□□ -0.83
CTR9-202ENST00000524523 PPIP5K1Q6PFW1 1433 aa9.87□□□□□ -0.83
CTR9-202ENST00000524523 ANKARQ7Z5J8 1434 aa9.87□□□□□ -0.83
CTR9-202ENST00000524523 CEP170BQ9Y4F5 1589 aaPredicted RBP9.87□□□□□ -0.83
CTR9-202ENST00000524523 ZMYND10O75800 440 aa9.86□□□□□ -0.83
CTR9-202ENST00000524523 SLFN5Q08AF3 891 aa9.86□□□□□ -0.83
CTR9-202ENST00000524523 PRR14Q9BWN1 585 aa9.86□□□□□ -0.83
CTR9-202ENST00000524523 TTC21AQ8NDW8 1320 aa9.85□□□□□ -0.83
CTR9-202ENST00000524523 PTPRUQ92729 1446 aa9.85□□□□□ -0.83
CTR9-202ENST00000524523 BARGINQ6ZT62 677 aa9.85□□□□□ -0.83
CTR9-202ENST00000524523 DAXXQ9UER7 740 aaPredicted RBP9.85□□□□□ -0.83
CTR9-202ENST00000524523 ZNF142P52746 1687 aaPredicted RBP9.85□□□□□ -0.83
CTR9-202ENST00000524523 APAF1O14727 1248 aa9.84□□□□□ -0.83
CTR9-202ENST00000524523 CT47B1P0C2W7 299 aaPredicted RBP9.84□□□□□ -0.83
CTR9-202ENST00000524523 DUSP27Q5VZP5 1158 aa9.84□□□□□ -0.83
CTR9-202ENST00000524523 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
CTR9-202ENST00000524523 COG3Q96JB2 828 aa9.84□□□□□ -0.83
CTR9-202ENST00000524523 SLC26A8Q96RN1 970 aa9.84□□□□□ -0.83
CTR9-202ENST00000524523 PHOX2BQ99453 314 aa9.84□□□□□ -0.83
CTR9-202ENST00000524523 GGNBP2Q9H3C7 697 aa9.84□□□□□ -0.83
CTR9-202ENST00000524523 DIAPH1O60610 1272 aaKnown RBP9.83□□□□□ -0.84
CTR9-202ENST00000524523 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.83□□□□□ -0.84
CTR9-202ENST00000524523 POLKQ9UBT6 870 aa9.83□□□□□ -0.84
CTR9-202ENST00000524523 IL16Q14005 1332 aa9.82□□□□□ -0.84
CTR9-202ENST00000524523 ANKRD26Q9UPS8 1709 aa9.82□□□□□ -0.84
CTR9-202ENST00000524523 APLP1P51693 650 aa9.82□□□□□ -0.84
CTR9-202ENST00000524523 WWC1Q8IX03 1113 aa9.82□□□□□ -0.84
CTR9-202ENST00000524523 SSH2Q76I76 1423 aa9.82□□□□□ -0.84
CTR9-202ENST00000524523 PRR36Q9H6K5 1346 aa9.82□□□□□ -0.84
CTR9-202ENST00000524523 KIF24Q5T7B8 1368 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 KCNA6P17658 529 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 RRP1P56182 461 aaKnown RBP9.81□□□□□ -0.84
CTR9-202ENST00000524523 AAMPQ13685 434 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 KMT5BQ4FZB7 885 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 SULF1Q8IWU6 871 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 TCP11L2Q8N4U5 519 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 NLRP7Q8WX94 980 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 XRN1Q8IZH2 1706 aaKnown RBP9.81□□□□□ -0.84
CTR9-202ENST00000524523 NCOA3Q9Y6Q9 1424 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 ACEP12821 1306 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 TTC21BQ7Z4L5 1316 aa9.81□□□□□ -0.84
CTR9-202ENST00000524523 COL3A1P02461 1466 aaPredicted RBP9.8□□□□□ -0.84
CTR9-202ENST00000524523 USP31Q70CQ4 1352 aa9.8□□□□□ -0.84
CTR9-202ENST00000524523 ITGBL1O95965 494 aaPredicted RBP9.8□□□□□ -0.84
CTR9-202ENST00000524523 NEFMP07197 916 aa9.8□□□□□ -0.84
CTR9-202ENST00000524523 U2AF1L5P0DN76 240 aaPredicted RBP9.8□□□□□ -0.84
CTR9-202ENST00000524523 U2AF1Q01081 240 aaKnown RBP eCLIP9.8□□□□□ -0.84
CTR9-202ENST00000524523 KCNC4Q03721 635 aa9.8□□□□□ -0.84
CTR9-202ENST00000524523 IFFO2Q5TF58 517 aa9.8□□□□□ -0.84
CTR9-202ENST00000524523 PLEKHF1Q96S99 279 aa9.8□□□□□ -0.84
CTR9-202ENST00000524523 USP6P35125 1406 aa9.8□□□□□ -0.84
CTR9-202ENST00000524523 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.79□□□□□ -0.84
CTR9-202ENST00000524523 DDX11L8A8MPP1 907 aa9.79□□□□□ -0.84
CTR9-202ENST00000524523 CFHP08603 1231 aa9.79□□□□□ -0.84
CTR9-202ENST00000524523 TNNT2P45379 298 aaPredicted RBP9.79□□□□□ -0.84
CTR9-202ENST00000524523 CALD1Q05682 793 aaKnown RBP9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms