RNA–Protein interactions for RNA: ENST00000524325.5

TSNARE1-208, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene TSNARE1, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-208ENST00000524325 CFAP44Q96MT7 982 aa29.63■■■□□ 2.33
TSNARE1-208ENST00000524325 IFT57Q9NWB7 429 aa29.63■■■□□ 2.33
TSNARE1-208ENST00000524325 ERVV-2B6SEH9 535 aa29.62■■■□□ 2.33
TSNARE1-208ENST00000524325 TSPYL4Q9UJ04 414 aa29.62■■■□□ 2.33
TSNARE1-208ENST00000524325 BTBD11A6QL63 1104 aa29.61■■■□□ 2.33
TSNARE1-208ENST00000524325 E9PSI1 815 aa29.61■■■□□ 2.33
TSNARE1-208ENST00000524325 PIGBQ92521 554 aa29.61■■■□□ 2.33
TSNARE1-208ENST00000524325 IL16Q14005 1332 aa29.61■■■□□ 2.33
TSNARE1-208ENST00000524325 CHL1O00533 1208 aa29.61■■■□□ 2.33
TSNARE1-208ENST00000524325 FANCIQ9NVI1 1328 aa29.6■■■□□ 2.33
TSNARE1-208ENST00000524325 GNAI1P63096 354 aa29.6■■■□□ 2.33
TSNARE1-208ENST00000524325 DUSP27Q5VZP5 1158 aa29.6■■■□□ 2.33
TSNARE1-208ENST00000524325 TMOD3Q9NYL9 352 aa29.6■■■□□ 2.33
TSNARE1-208ENST00000524325 KRT24Q2M2I5 525 aa29.59■■■□□ 2.33
TSNARE1-208ENST00000524325 TOGARAM1Q9Y4F4 1720 aa29.58■■■□□ 2.33
TSNARE1-208ENST00000524325 TRMT2AQ8IZ69 625 aaKnown RBP29.57■■■□□ 2.32
TSNARE1-208ENST00000524325 ADAMTS7Q9UKP4 1686 aa29.57■■■□□ 2.32
TSNARE1-208ENST00000524325 MYH16Q9H6N6 1097 aa29.57■■■□□ 2.32
TSNARE1-208ENST00000524325 BRWD3Q6RI45 1802 aa29.56■■■□□ 2.32
TSNARE1-208ENST00000524325 ASAP1Q9ULH1 1129 aa29.55■■■□□ 2.32
TSNARE1-208ENST00000524325 SCN11AQ9UI33 1791 aa29.54■■■□□ 2.32
TSNARE1-208ENST00000524325 ELL2O00472 640 aaPredicted RBP29.54■■■□□ 2.32
TSNARE1-208ENST00000524325 MRC1P22897 1456 aa29.53■■■□□ 2.32
TSNARE1-208ENST00000524325 EXOSC9Q06265 439 aaKnown RBP29.53■■■□□ 2.32
TSNARE1-208ENST00000524325 FAM196AQ6ZSG2 479 aa29.52■■■□□ 2.32
TSNARE1-208ENST00000524325 BCL9O00512 1426 aa29.52■■■□□ 2.32
TSNARE1-208ENST00000524325 ZNF790Q6PG37 636 aa29.52■■■□□ 2.32
TSNARE1-208ENST00000524325 TSPYL6Q8N831 410 aa29.51■■■□□ 2.31
TSNARE1-208ENST00000524325 C8orf58Q8NAV2 365 aa29.51■■■□□ 2.31
TSNARE1-208ENST00000524325 DOT1LQ8TEK3 1739 aa29.5■■■□□ 2.31
TSNARE1-208ENST00000524325 TRIM37O94972 964 aa29.5■■■□□ 2.31
TSNARE1-208ENST00000524325 ATG3Q9NT62 314 aa29.5■■■□□ 2.31
TSNARE1-208ENST00000524325 KAT6BQ8WYB5 2073 aa29.5■■■□□ 2.31
TSNARE1-208ENST00000524325 PTCD1O75127 700 aaKnown RBP29.49■■■□□ 2.31
TSNARE1-208ENST00000524325 ZNF496Q96IT1 587 aaPredicted RBP29.48■■■□□ 2.31
TSNARE1-208ENST00000524325 EIF4A1P60842 406 aaKnown RBP29.47■■■□□ 2.31
TSNARE1-208ENST00000524325 TTC5Q8N0Z6 440 aa29.47■■■□□ 2.31
TSNARE1-208ENST00000524325 VIRMAQ69YN4 1812 aaKnown RBP29.46■■■□□ 2.31
TSNARE1-208ENST00000524325 PRAMEF22A3QJZ6 481 aa29.46■■■□□ 2.31
TSNARE1-208ENST00000524325 BABAM1Q9NWV8 329 aa29.46■■■□□ 2.31
TSNARE1-208ENST00000524325 SIPA1L3O60292 1781 aaPredicted RBP29.43■■■□□ 2.3
TSNARE1-208ENST00000524325 RBM42Q9BTD8 480 aaKnown RBP29.43■■■□□ 2.3
TSNARE1-208ENST00000524325 BCL11BQ9C0K0 894 aaPredicted RBP29.42■■■□□ 2.3
TSNARE1-208ENST00000524325 TCERG1O14776 1098 aaKnown RBP29.41■■■□□ 2.3
TSNARE1-208ENST00000524325 NECTIN2Q92692 538 aa29.41■■■□□ 2.3
TSNARE1-208ENST00000524325 ITGB4P16144 1822 aa29.41■■■□□ 2.3
TSNARE1-208ENST00000524325 KCNQ4P56696 695 aa29.4■■■□□ 2.3
TSNARE1-208ENST00000524325 TWISTNBQ3B726 338 aaPredicted RBP29.4■■■□□ 2.3
TSNARE1-208ENST00000524325 SLC4A9Q96Q91 983 aa29.39■■■□□ 2.29
TSNARE1-208ENST00000524325 FMNL2Q96PY5 1086 aa29.38■■■□□ 2.29
TSNARE1-208ENST00000524325 VAMP4O75379 141 aa29.37■■■□□ 2.29
TSNARE1-208ENST00000524325 PALLDQ8WX93 1383 aa29.37■■■□□ 2.29
TSNARE1-208ENST00000524325 GIGYF1O75420 1035 aaPredicted RBP29.37■■■□□ 2.29
TSNARE1-208ENST00000524325 EIF2S2P20042 333 aaKnown RBP29.36■■■□□ 2.29
TSNARE1-208ENST00000524325 KDM3BQ7LBC6 1761 aa29.36■■■□□ 2.29
TSNARE1-208ENST00000524325 BCL2L13Q9BXK5 485 aa29.35■■■□□ 2.29
TSNARE1-208ENST00000524325 KCPQ6ZWJ8 1503 aa29.35■■■□□ 2.29
TSNARE1-208ENST00000524325 CENPBP07199 599 aaPredicted RBP29.35■■■□□ 2.29
TSNARE1-208ENST00000524325 USP16Q9Y5T5 823 aa29.34■■■□□ 2.29
TSNARE1-208ENST00000524325 HEG1Q9ULI3 1381 aa29.34■■■□□ 2.29
TSNARE1-208ENST00000524325 NHSQ6T4R5 1651 aa29.34■■■□□ 2.29
TSNARE1-208ENST00000524325 LOC102724428A0A0B4J2F2 783 aa29.32■■■□□ 2.28
TSNARE1-208ENST00000524325 SIK1P57059 783 aa29.32■■■□□ 2.28
TSNARE1-208ENST00000524325 APBA3O96018 575 aa29.32■■■□□ 2.28
TSNARE1-208ENST00000524325 SNRPA1P09661 255 aaKnown RBP29.32■■■□□ 2.28
TSNARE1-208ENST00000524325 DNAJC10Q8IXB1 793 aa29.32■■■□□ 2.28
TSNARE1-208ENST00000524325 SMARCC1Q92922 1105 aaPredicted RBP29.32■■■□□ 2.28
TSNARE1-208ENST00000524325 SBF2Q86WG5 1849 aa29.31■■■□□ 2.28
TSNARE1-208ENST00000524325 PIP4K2AP48426 406 aaPredicted RBP29.3■■■□□ 2.28
TSNARE1-208ENST00000524325 RCAN3Q9UKA8 241 aa29.3■■■□□ 2.28
TSNARE1-208ENST00000524325 PAPPAQ13219 1627 aa29.3■■■□□ 2.28
TSNARE1-208ENST00000524325 ATP6V1AP38606 617 aa29.3■■■□□ 2.28
TSNARE1-208ENST00000524325 BCAR3O75815 825 aa29.29■■■□□ 2.28
TSNARE1-208ENST00000524325 BTAF1O14981 1849 aa29.28■■■□□ 2.28
TSNARE1-208ENST00000524325 ITPK1Q13572 414 aa29.28■■■□□ 2.28
TSNARE1-208ENST00000524325 HDGFL1Q5TGJ6 251 aa29.28■■■□□ 2.28
TSNARE1-208ENST00000524325 RARSP54136 660 aaKnown RBP29.28■■■□□ 2.28
TSNARE1-208ENST00000524325 SSH1Q8WYL5 1049 aa29.28■■■□□ 2.28
TSNARE1-208ENST00000524325 ANXA1P04083 346 aa29.27■■■□□ 2.28
TSNARE1-208ENST00000524325 ILDR2Q71H61 639 aa29.26■■■□□ 2.27
TSNARE1-208ENST00000524325 CCNL1Q9UK58 526 aaPredicted RBP29.24■■■□□ 2.27
TSNARE1-208ENST00000524325 A1BGP04217 495 aa29.24■■■□□ 2.27
TSNARE1-208ENST00000524325 PROSER3Q2NL68 480 aa29.23■■■□□ 2.27
TSNARE1-208ENST00000524325 VSIG10Q8N0Z9 540 aa29.23■■■□□ 2.27
TSNARE1-208ENST00000524325 PROM2Q8N271 834 aa29.23■■■□□ 2.27
TSNARE1-208ENST00000524325 LRRC4BQ9NT99 713 aa29.23■■■□□ 2.27
TSNARE1-208ENST00000524325 SMC4Q9NTJ3 1288 aa29.23■■■□□ 2.27
TSNARE1-208ENST00000524325 CHPF2Q9P2E5 772 aa29.23■■■□□ 2.27
TSNARE1-208ENST00000524325 UBR2Q8IWV8 1755 aa29.23■■■□□ 2.27
TSNARE1-208ENST00000524325 HOXB7P09629 217 aa29.22■■■□□ 2.27
TSNARE1-208ENST00000524325 CT47B1P0C2W7 299 aaPredicted RBP29.22■■■□□ 2.27
TSNARE1-208ENST00000524325 EN1Q05925 392 aaPredicted RBP29.21■■■□□ 2.27
TSNARE1-208ENST00000524325 CCDC30Q5VVM6 783 aa29.21■■■□□ 2.27
TSNARE1-208ENST00000524325 LINC00116Q8NCU8 138 aa29.21■■■□□ 2.27
TSNARE1-208ENST00000524325 C5P01031 1676 aa29.2■■■□□ 2.26
TSNARE1-208ENST00000524325 SLC4A2P04920 1241 aa29.2■■■□□ 2.26
TSNARE1-208ENST00000524325 CYP19A1P11511 503 aaPredicted RBP29.2■■■□□ 2.26
TSNARE1-208ENST00000524325 MYL6BP14649 208 aa29.2■■■□□ 2.26
TSNARE1-208ENST00000524325 DEFB132Q7Z7B7 95 aa29.2■■■□□ 2.26
TSNARE1-208ENST00000524325 SUPT16HQ9Y5B9 1047 aaKnown RBP29.2■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms