RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 MAP3K5Q99683 1374 aa15.95■□□□□ 0.14
CLN8-207ENST00000524258 GNAT3A8MTJ3 354 aa15.94■□□□□ 0.14
CLN8-207ENST00000524258 PDGFDQ9GZP0 370 aaPredicted RBP15.94■□□□□ 0.14
CLN8-207ENST00000524258 CCNL1Q9UK58 526 aaPredicted RBP15.94■□□□□ 0.14
CLN8-207ENST00000524258 LOC102724428A0A0B4J2F2 783 aa15.93■□□□□ 0.14
CLN8-207ENST00000524258 SIK1P57059 783 aa15.93■□□□□ 0.14
CLN8-207ENST00000524258 ITPK1Q13572 414 aa15.93■□□□□ 0.14
CLN8-207ENST00000524258 ADAMTS8Q9UP79 889 aa15.92■□□□□ 0.14
CLN8-207ENST00000524258 STK32BQ9NY57 414 aa15.91■□□□□ 0.14
CLN8-207ENST00000524258 HTATSF1O43719 755 aaKnown RBP15.9■□□□□ 0.14
CLN8-207ENST00000524258 NFE2L2Q16236 605 aa15.9■□□□□ 0.14
CLN8-207ENST00000524258 AMIGO3Q86WK7 504 aa15.9■□□□□ 0.14
CLN8-207ENST00000524258 LINC00116Q8NCU8 138 aa15.9■□□□□ 0.14
CLN8-207ENST00000524258 SLC39A6Q13433 755 aa15.89■□□□□ 0.13
CLN8-207ENST00000524258 CASZ1Q86V15 1759 aa15.88■□□□□ 0.13
CLN8-207ENST00000524258 DCTN1Q14203 1278 aa15.88■□□□□ 0.13
CLN8-207ENST00000524258 MCM10Q7L590 875 aa15.88■□□□□ 0.13
CLN8-207ENST00000524258 PNPLA7Q6ZV29 1317 aa15.88■□□□□ 0.13
CLN8-207ENST00000524258 TAF1LQ8IZX4 1826 aa15.87■□□□□ 0.13
CLN8-207ENST00000524258 ZNF831Q5JPB2 1677 aa15.87■□□□□ 0.13
CLN8-207ENST00000524258 ANP32CO43423 234 aa15.87■□□□□ 0.13
CLN8-207ENST00000524258 PNISRQ8TF01 805 aaKnown RBP15.87■□□□□ 0.13
CLN8-207ENST00000524258 PNNQ9H307 717 aaKnown RBP15.87■□□□□ 0.13
CLN8-207ENST00000524258 KCPQ6ZWJ8 1503 aa15.87■□□□□ 0.13
CLN8-207ENST00000524258 SIPA1L3O60292 1781 aaPredicted RBP15.87■□□□□ 0.13
CLN8-207ENST00000524258 PTCD1O75127 700 aaKnown RBP15.86■□□□□ 0.13
CLN8-207ENST00000524258 ATP6V1AP38606 617 aa15.86■□□□□ 0.13
CLN8-207ENST00000524258 TMPOP42166 694 aaKnown RBP15.86■□□□□ 0.13
CLN8-207ENST00000524258 VIRMAQ69YN4 1812 aaKnown RBP15.86■□□□□ 0.13
CLN8-207ENST00000524258 KCNQ3O43525 872 aa15.85■□□□□ 0.13
CLN8-207ENST00000524258 CCDC146Q8IYE0 955 aa15.85■□□□□ 0.13
CLN8-207ENST00000524258 RUNDC1Q96C34 613 aa15.85■□□□□ 0.13
CLN8-207ENST00000524258 RBM42Q9BTD8 480 aaKnown RBP15.85■□□□□ 0.13
CLN8-207ENST00000524258 C5P01031 1676 aa15.85■□□□□ 0.13
CLN8-207ENST00000524258 CICQ96RK0 1608 aaPredicted RBP15.84■□□□□ 0.13
CLN8-207ENST00000524258 TEFQ10587 303 aa15.84■□□□□ 0.13
CLN8-207ENST00000524258 WDR43Q15061 677 aaKnown RBP eCLIP15.84■□□□□ 0.13
CLN8-207ENST00000524258 ZNF790Q6PG37 636 aa15.84■□□□□ 0.13
CLN8-207ENST00000524258 SMIM5Q71RC9 77 aa15.84■□□□□ 0.13
CLN8-207ENST00000524258 SGIP1Q9BQI5 828 aa15.84■□□□□ 0.13
CLN8-207ENST00000524258 C4BP0C0L5 1744 aa15.84■□□□□ 0.13
CLN8-207ENST00000524258 QSER1Q2KHR3 1735 aa15.83■□□□□ 0.13
CLN8-207ENST00000524258 TUBGCP6Q96RT7 1819 aa15.83■□□□□ 0.12
CLN8-207ENST00000524258 RC3H1Q5TC82 1133 aaKnown RBP15.83■□□□□ 0.12
CLN8-207ENST00000524258 COL23A1Q86Y22 540 aaPredicted RBP15.83■□□□□ 0.12
CLN8-207ENST00000524258 ZNF496Q96IT1 587 aaPredicted RBP15.83■□□□□ 0.12
CLN8-207ENST00000524258 THUMPD2Q9BTF0 503 aaKnown RBP15.83■□□□□ 0.12
CLN8-207ENST00000524258 TFCP2L1Q9NZI6 479 aa15.83■□□□□ 0.12
CLN8-207ENST00000524258 TRIM35Q9UPQ4 493 aa15.83■□□□□ 0.12
CLN8-207ENST00000524258 DLG5Q8TDM6 1919 aa15.82■□□□□ 0.12
CLN8-207ENST00000524258 PTGER2P43116 358 aa15.82■□□□□ 0.12
CLN8-207ENST00000524258 RIPK4P57078 832 aa15.82■□□□□ 0.12
CLN8-207ENST00000524258 DNAJC10Q8IXB1 793 aa15.82■□□□□ 0.12
CLN8-207ENST00000524258 RTF1Q92541 710 aaKnown RBP15.82■□□□□ 0.12
CLN8-207ENST00000524258 MAPK8IP3Q9UPT6 1336 aa15.82■□□□□ 0.12
CLN8-207ENST00000524258 LRP5O75197 1615 aa15.82■□□□□ 0.12
CLN8-207ENST00000524258 UBR2Q8IWV8 1755 aa15.82■□□□□ 0.12
CLN8-207ENST00000524258 HMGB2P26583 209 aaKnown RBP15.81■□□□□ 0.12
CLN8-207ENST00000524258 TJP1Q07157 1748 aa15.81■□□□□ 0.12
CLN8-207ENST00000524258 TAF7Q15545 349 aaPredicted RBP15.81■□□□□ 0.12
CLN8-207ENST00000524258 INTS5Q6P9B9 1019 aaKnown RBP15.81■□□□□ 0.12
CLN8-207ENST00000524258 VSIG10Q8N0Z9 540 aa15.81■□□□□ 0.12
CLN8-207ENST00000524258 CNTNAP4Q9C0A0 1308 aa15.81■□□□□ 0.12
CLN8-207ENST00000524258 RRP7AQ9Y3A4 280 aaKnown RBP15.81■□□□□ 0.12
CLN8-207ENST00000524258 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
CLN8-207ENST00000524258 COL5A3P25940 1745 aaPredicted RBP15.8■□□□□ 0.12
CLN8-207ENST00000524258 BTBD11A6QL63 1104 aa15.8■□□□□ 0.12
CLN8-207ENST00000524258 ZBTB7AO95365 584 aa15.8■□□□□ 0.12
CLN8-207ENST00000524258 NEFMP07197 916 aa15.8■□□□□ 0.12
CLN8-207ENST00000524258 CYP19A1P11511 503 aaPredicted RBP15.8■□□□□ 0.12
CLN8-207ENST00000524258 MRS2Q9HD23 443 aa15.8■□□□□ 0.12
CLN8-207ENST00000524258 HEG1Q9ULI3 1381 aa15.79■□□□□ 0.12
CLN8-207ENST00000524258 CRKLP46109 303 aaKnown RBP15.79■□□□□ 0.12
CLN8-207ENST00000524258 SLC16A10Q8TF71 515 aa15.79■□□□□ 0.12
CLN8-207ENST00000524258 MTFR1LQ9H019 292 aa15.79■□□□□ 0.12
CLN8-207ENST00000524258 MIS18AQ9NYP9 233 aa15.79■□□□□ 0.12
CLN8-207ENST00000524258 UBR3Q6ZT12 1888 aa15.79■□□□□ 0.12
CLN8-207ENST00000524258 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.78■□□□□ 0.12
CLN8-207ENST00000524258 APAF1O14727 1248 aa15.78■□□□□ 0.12
CLN8-207ENST00000524258 RPS6KA4O75676 772 aa15.78■□□□□ 0.12
CLN8-207ENST00000524258 SSFA2P28290 1259 aa15.78■□□□□ 0.12
CLN8-207ENST00000524258 AK7Q96M32 723 aa15.78■□□□□ 0.12
CLN8-207ENST00000524258 SPON1Q9HCB6 807 aa15.78■□□□□ 0.12
CLN8-207ENST00000524258 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
CLN8-207ENST00000524258 COL24A1Q17RW2 1714 aa15.77■□□□□ 0.12
CLN8-207ENST00000524258 GNPATO15228 680 aa15.77■□□□□ 0.12
CLN8-207ENST00000524258 FLAD1Q8NFF5 587 aa15.77■□□□□ 0.12
CLN8-207ENST00000524258 PRAMEF22A3QJZ6 481 aa15.76■□□□□ 0.11
CLN8-207ENST00000524258 TTC5Q8N0Z6 440 aa15.76■□□□□ 0.11
CLN8-207ENST00000524258 FMNL2Q96PY5 1086 aa15.76■□□□□ 0.11
CLN8-207ENST00000524258 NEUROD2Q15784 382 aa15.75■□□□□ 0.11
CLN8-207ENST00000524258 ARHGEF1Q92888 912 aaKnown RBP15.75■□□□□ 0.11
CLN8-207ENST00000524258 CCDC87Q9NVE4 849 aa15.75■□□□□ 0.11
CLN8-207ENST00000524258 CHL1O00533 1208 aa15.74■□□□□ 0.11
CLN8-207ENST00000524258 EIF4A1P60842 406 aaKnown RBP15.74■□□□□ 0.11
CLN8-207ENST00000524258 LMOD3Q0VAK6 560 aa15.74■□□□□ 0.11
CLN8-207ENST00000524258 ZBTB1Q9Y2K1 713 aa15.74■□□□□ 0.11
CLN8-207ENST00000524258 RTCBQ9Y3I0 505 aaKnown RBP15.74■□□□□ 0.11
CLN8-207ENST00000524258 USP16Q9Y5T5 823 aa15.74■□□□□ 0.11
CLN8-207ENST00000524258 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms