RNA–Protein interactions for RNA: ENST00000524215.5

RUNX1T1-247, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 4

Gene RUNX1T1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-247ENST00000524215 ERVV-2B6SEH9 535 aa12.42□□□□□ -0.42
RUNX1T1-247ENST00000524215 KCNQ4P56696 695 aa12.42□□□□□ -0.42
RUNX1T1-247ENST00000524215 SULT6B1Q6IMI4 303 aa12.42□□□□□ -0.42
RUNX1T1-247ENST00000524215 PIGBQ92521 554 aa12.42□□□□□ -0.42
RUNX1T1-247ENST00000524215 KDRP35968 1356 aa12.42□□□□□ -0.42
RUNX1T1-247ENST00000524215 JMYQ8N9B5 988 aa12.41□□□□□ -0.42
RUNX1T1-247ENST00000524215 ATP10DQ9P241 1426 aa12.41□□□□□ -0.42
RUNX1T1-247ENST00000524215 TAF1LQ8IZX4 1826 aa12.41□□□□□ -0.42
RUNX1T1-247ENST00000524215 MAP3K5Q99683 1374 aa12.41□□□□□ -0.42
RUNX1T1-247ENST00000524215 C4BP0C0L5 1744 aa12.4□□□□□ -0.42
RUNX1T1-247ENST00000524215 LOC102724428A0A0B4J2F2 783 aa12.4□□□□□ -0.42
RUNX1T1-247ENST00000524215 DIAPH1O60610 1272 aaKnown RBP12.4□□□□□ -0.42
RUNX1T1-247ENST00000524215 MTHFSP49914 203 aa12.4□□□□□ -0.42
RUNX1T1-247ENST00000524215 SIK1P57059 783 aa12.4□□□□□ -0.42
RUNX1T1-247ENST00000524215 CABP4P57796 275 aa12.4□□□□□ -0.42
RUNX1T1-247ENST00000524215 KLHL34Q8N239 644 aa12.4□□□□□ -0.42
RUNX1T1-247ENST00000524215 PER1O15534 1290 aaPredicted RBP12.39□□□□□ -0.43
RUNX1T1-247ENST00000524215 IL13P35225 146 aa12.39□□□□□ -0.43
RUNX1T1-247ENST00000524215 CFAP53Q96M91 514 aa12.39□□□□□ -0.43
RUNX1T1-247ENST00000524215 SGIP1Q9BQI5 828 aa12.39□□□□□ -0.43
RUNX1T1-247ENST00000524215 ATP6V1AP38606 617 aa12.38□□□□□ -0.43
RUNX1T1-247ENST00000524215 AEBP1Q8IUX7 1158 aa12.38□□□□□ -0.43
RUNX1T1-247ENST00000524215 SSFA2P28290 1259 aa12.37□□□□□ -0.43
RUNX1T1-247ENST00000524215 CNGB1Q14028 1251 aaPredicted RBP12.37□□□□□ -0.43
RUNX1T1-247ENST00000524215 GPR162Q16538 588 aa12.37□□□□□ -0.43
RUNX1T1-247ENST00000524215 GPBP1L1Q9HC44 474 aaPredicted RBP12.37□□□□□ -0.43
RUNX1T1-247ENST00000524215 ASAP1Q9ULH1 1129 aa12.37□□□□□ -0.43
RUNX1T1-247ENST00000524215 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
RUNX1T1-247ENST00000524215 ZNF831Q5JPB2 1677 aa12.36□□□□□ -0.43
RUNX1T1-247ENST00000524215 PHF14O94880 888 aa12.36□□□□□ -0.43
RUNX1T1-247ENST00000524215 AKAP4Q5JQC9 854 aa12.36□□□□□ -0.43
RUNX1T1-247ENST00000524215 COL23A1Q86Y22 540 aaPredicted RBP12.36□□□□□ -0.43
RUNX1T1-247ENST00000524215 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
RUNX1T1-247ENST00000524215 ATG3Q9NT62 314 aa12.36□□□□□ -0.43
RUNX1T1-247ENST00000524215 KDM6AO15550 1401 aaPredicted RBP12.36□□□□□ -0.43
RUNX1T1-247ENST00000524215 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.35□□□□□ -0.43
RUNX1T1-247ENST00000524215 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
RUNX1T1-247ENST00000524215 GNPATO15228 680 aa12.35□□□□□ -0.43
RUNX1T1-247ENST00000524215 HMOX1P09601 288 aa12.35□□□□□ -0.43
RUNX1T1-247ENST00000524215 UBR3Q6ZT12 1888 aa12.35□□□□□ -0.43
RUNX1T1-247ENST00000524215 KLRG1Q96E93 195 aa12.34□□□□□ -0.43
RUNX1T1-247ENST00000524215 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
RUNX1T1-247ENST00000524215 RTCBQ9Y3I0 505 aaKnown RBP12.34□□□□□ -0.43
RUNX1T1-247ENST00000524215 SCN11AQ9UI33 1791 aa12.33□□□□□ -0.44
RUNX1T1-247ENST00000524215 MSL1Q68DK7 614 aa12.33□□□□□ -0.44
RUNX1T1-247ENST00000524215 LINC00116Q8NCU8 138 aa12.33□□□□□ -0.44
RUNX1T1-247ENST00000524215 GAS2L2Q8NHY3 880 aa12.33□□□□□ -0.44
RUNX1T1-247ENST00000524215 ADRA2BP18089 450 aa12.32□□□□□ -0.44
RUNX1T1-247ENST00000524215 PELP1Q8IZL8 1130 aaKnown RBP12.32□□□□□ -0.44
RUNX1T1-247ENST00000524215 NFATC2IPQ8NCF5 419 aa12.32□□□□□ -0.44
RUNX1T1-247ENST00000524215 CNTNAP4Q9C0A0 1308 aa12.32□□□□□ -0.44
RUNX1T1-247ENST00000524215 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
RUNX1T1-247ENST00000524215 ITPK1Q13572 414 aa12.31□□□□□ -0.44
RUNX1T1-247ENST00000524215 TRAPPC3LQ5T215 181 aa12.31□□□□□ -0.44
RUNX1T1-247ENST00000524215 RC3H1Q5TC82 1133 aaKnown RBP12.31□□□□□ -0.44
RUNX1T1-247ENST00000524215 SLC52A2Q9HAB3 445 aa12.31□□□□□ -0.44
RUNX1T1-247ENST00000524215 COL3A1P02461 1466 aaPredicted RBP12.31□□□□□ -0.44
RUNX1T1-247ENST00000524215 COL5A3P25940 1745 aaPredicted RBP12.31□□□□□ -0.44
RUNX1T1-247ENST00000524215 MRC1P22897 1456 aa12.3□□□□□ -0.44
RUNX1T1-247ENST00000524215 NEFMP07197 916 aa12.3□□□□□ -0.44
RUNX1T1-247ENST00000524215 RFC4P35249 363 aa12.3□□□□□ -0.44
RUNX1T1-247ENST00000524215 TEFQ10587 303 aa12.3□□□□□ -0.44
RUNX1T1-247ENST00000524215 CD2APQ9Y5K6 639 aa12.3□□□□□ -0.44
RUNX1T1-247ENST00000524215 GRIN3BO60391 1043 aa12.29□□□□□ -0.44
RUNX1T1-247ENST00000524215 TTC5Q8N0Z6 440 aa12.29□□□□□ -0.44
RUNX1T1-247ENST00000524215 NLGN1Q8N2Q7 840 aa12.29□□□□□ -0.44
RUNX1T1-247ENST00000524215 CICQ96RK0 1608 aaPredicted RBP12.29□□□□□ -0.44
RUNX1T1-247ENST00000524215 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
RUNX1T1-247ENST00000524215 GNAT3A8MTJ3 354 aa12.28□□□□□ -0.44
RUNX1T1-247ENST00000524215 RNMTO43148 476 aaKnown RBP12.28□□□□□ -0.44
RUNX1T1-247ENST00000524215 RPS6KA4O75676 772 aa12.28□□□□□ -0.44
RUNX1T1-247ENST00000524215 MTHFSDQ2M296 383 aaKnown RBP12.28□□□□□ -0.44
RUNX1T1-247ENST00000524215 ZNF526Q8TF50 670 aaPredicted RBP12.28□□□□□ -0.44
RUNX1T1-247ENST00000524215 U2AF1L5P0DN76 240 aaPredicted RBP12.27□□□□□ -0.45
RUNX1T1-247ENST00000524215 PPP2R1AP30153 589 aa12.27□□□□□ -0.45
RUNX1T1-247ENST00000524215 HTRA3P83110 453 aa12.27□□□□□ -0.45
RUNX1T1-247ENST00000524215 U2AF1Q01081 240 aaKnown RBP eCLIP12.27□□□□□ -0.45
RUNX1T1-247ENST00000524215 WDR90Q96KV7 1748 aa12.27□□□□□ -0.45
RUNX1T1-247ENST00000524215 ADAMTS7Q9UKP4 1686 aa12.26□□□□□ -0.45
RUNX1T1-247ENST00000524215 KIF3CO14782 793 aa12.26□□□□□ -0.45
RUNX1T1-247ENST00000524215 CRKLP46109 303 aaKnown RBP12.26□□□□□ -0.45
RUNX1T1-247ENST00000524215 NLGN2Q8NFZ4 835 aa12.26□□□□□ -0.45
RUNX1T1-247ENST00000524215 RTF1Q92541 710 aaKnown RBP12.26□□□□□ -0.45
RUNX1T1-247ENST00000524215 TJP1Q07157 1748 aa12.25□□□□□ -0.45
RUNX1T1-247ENST00000524215 MMP10P09238 476 aa12.25□□□□□ -0.45
RUNX1T1-247ENST00000524215 PRKAR2BP31323 418 aa12.25□□□□□ -0.45
RUNX1T1-247ENST00000524215 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
RUNX1T1-247ENST00000524215 LGR6Q9HBX8 967 aa12.25□□□□□ -0.45
RUNX1T1-247ENST00000524215 CCDC87Q9NVE4 849 aa12.25□□□□□ -0.45
RUNX1T1-247ENST00000524215 ADCY9O60503 1353 aa12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 ZPR1O75312 459 aa12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 FCHSD2O94868 740 aa12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 STARD3NLO95772 234 aa12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 NPM2Q86SE8 214 aaKnown RBP12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 AMIGO3Q86WK7 504 aa12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 ARHGEF1Q92888 912 aaKnown RBP12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 PNNQ9H307 717 aaKnown RBP12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 PARP3Q9Y6F1 533 aa12.24□□□□□ -0.45
RUNX1T1-247ENST00000524215 C4AP0C0L4 1744 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms