RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 HMGB2P26583 209 aaKnown RBP25.72■■□□□ 1.71
FBXO28-205ENST00000523990 PPP1R1BQ9UD71 204 aaPredicted RBP25.72■■□□□ 1.71
FBXO28-205ENST00000523990 CABP4P57796 275 aa25.71■■□□□ 1.71
FBXO28-205ENST00000523990 MTHFSDQ2M296 383 aaKnown RBP25.71■■□□□ 1.71
FBXO28-205ENST00000523990 SGIP1Q9BQI5 828 aa25.71■■□□□ 1.71
FBXO28-205ENST00000523990 SIPA1L3O60292 1781 aaPredicted RBP25.71■■□□□ 1.71
FBXO28-205ENST00000523990 UTRNP46939 3433 aa25.7■■□□□ 1.71
FBXO28-205ENST00000523990 TJP1Q07157 1748 aa25.7■■□□□ 1.7
FBXO28-205ENST00000523990 SLC16A10Q8TF71 515 aa25.7■■□□□ 1.7
FBXO28-205ENST00000523990 GOLGB1Q14789 3259 aaKnown RBP25.68■■□□□ 1.7
FBXO28-205ENST00000523990 ITPK1Q13572 414 aa25.68■■□□□ 1.7
FBXO28-205ENST00000523990 NFATC2IPQ8NCF5 419 aa25.68■■□□□ 1.7
FBXO28-205ENST00000523990 LINC00116Q8NCU8 138 aa25.68■■□□□ 1.7
FBXO28-205ENST00000523990 UBR2Q8IWV8 1755 aa25.68■■□□□ 1.7
FBXO28-205ENST00000523990 ATP6V1AP38606 617 aa25.67■■□□□ 1.7
FBXO28-205ENST00000523990 RSPH6AQ9H0K4 717 aa25.67■■□□□ 1.7
FBXO28-205ENST00000523990 DDX10Q13206 875 aaKnown RBP25.66■■□□□ 1.7
FBXO28-205ENST00000523990 COL23A1Q86Y22 540 aaPredicted RBP25.66■■□□□ 1.7
FBXO28-205ENST00000523990 SLC4A9Q96Q91 983 aa25.66■■□□□ 1.7
FBXO28-205ENST00000523990 LGR6Q9HBX8 967 aa25.66■■□□□ 1.7
FBXO28-205ENST00000523990 NUDCQ9Y266 331 aa25.66■■□□□ 1.7
FBXO28-205ENST00000523990 MYH14Q7Z406 1995 aaKnown RBP25.66■■□□□ 1.7
FBXO28-205ENST00000523990 RNMTO43148 476 aaKnown RBP25.65■■□□□ 1.7
FBXO28-205ENST00000523990 AK7Q96M32 723 aa25.65■■□□□ 1.7
FBXO28-205ENST00000523990 ZEB1P37275 1124 aaPredicted RBP25.64■■□□□ 1.7
FBXO28-205ENST00000523990 AMIGO3Q86WK7 504 aa25.64■■□□□ 1.7
FBXO28-205ENST00000523990 SLC52A2Q9HAB3 445 aa25.64■■□□□ 1.7
FBXO28-205ENST00000523990 MAP3K5Q99683 1374 aa25.64■■□□□ 1.69
FBXO28-205ENST00000523990 PRKAR2BP31323 418 aa25.63■■□□□ 1.69
FBXO28-205ENST00000523990 GAS2L2Q8NHY3 880 aa25.63■■□□□ 1.69
FBXO28-205ENST00000523990 RBM42Q9BTD8 480 aaKnown RBP25.63■■□□□ 1.69
FBXO28-205ENST00000523990 U2AF1L5P0DN76 240 aaPredicted RBP25.62■■□□□ 1.69
FBXO28-205ENST00000523990 U2AF1Q01081 240 aaKnown RBP eCLIP25.62■■□□□ 1.69
FBXO28-205ENST00000523990 FLAD1Q8NFF5 587 aa25.62■■□□□ 1.69
FBXO28-205ENST00000523990 KCPQ6ZWJ8 1503 aa25.61■■□□□ 1.69
FBXO28-205ENST00000523990 C4AP0C0L4 1744 aa25.61■■□□□ 1.69
FBXO28-205ENST00000523990 DLG5Q8TDM6 1919 aa25.61■■□□□ 1.69
FBXO28-205ENST00000523990 MSH5O43196 834 aa25.6■■□□□ 1.69
FBXO28-205ENST00000523990 PHACTR3Q96KR7 559 aa25.6■■□□□ 1.69
FBXO28-205ENST00000523990 SSFA2P28290 1259 aa25.59■■□□□ 1.69
FBXO28-205ENST00000523990 ARXQ96QS3 562 aa25.59■■□□□ 1.69
FBXO28-205ENST00000523990 GNAT3A8MTJ3 354 aa25.58■■□□□ 1.69
FBXO28-205ENST00000523990 PTCD1O75127 700 aaKnown RBP25.58■■□□□ 1.69
FBXO28-205ENST00000523990 RALBP1Q15311 655 aa25.58■■□□□ 1.69
FBXO28-205ENST00000523990 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.57■■□□□ 1.68
FBXO28-205ENST00000523990 GNPATO15228 680 aa25.57■■□□□ 1.68
FBXO28-205ENST00000523990 FCHSD2O94868 740 aa25.57■■□□□ 1.68
FBXO28-205ENST00000523990 PHF14O94880 888 aa25.57■■□□□ 1.68
FBXO28-205ENST00000523990 FHDC1Q9C0D6 1143 aaPredicted RBP25.57■■□□□ 1.68
FBXO28-205ENST00000523990 POLD1P28340 1107 aa25.56■■□□□ 1.68
FBXO28-205ENST00000523990 SMIM5Q71RC9 77 aa25.56■■□□□ 1.68
FBXO28-205ENST00000523990 CNTNAP4Q9C0A0 1308 aa25.56■■□□□ 1.68
FBXO28-205ENST00000523990 CEMIPQ8WUJ3 1361 aa25.55■■□□□ 1.68
FBXO28-205ENST00000523990 IL17REQ8NFR9 667 aa25.54■■□□□ 1.68
FBXO28-205ENST00000523990 RC3H1Q5TC82 1133 aaKnown RBP25.54■■□□□ 1.68
FBXO28-205ENST00000523990 MSL1Q68DK7 614 aa25.54■■□□□ 1.68
FBXO28-205ENST00000523990 SYT17Q9BSW7 474 aa25.54■■□□□ 1.68
FBXO28-205ENST00000523990 SLC39A6Q13433 755 aa25.53■■□□□ 1.68
FBXO28-205ENST00000523990 MYBBP1AQ9BQG0 1328 aaKnown RBP25.5■■□□□ 1.67
FBXO28-205ENST00000523990 TEFQ10587 303 aa25.5■■□□□ 1.67
FBXO28-205ENST00000523990 RTCBQ9Y3I0 505 aaKnown RBP25.5■■□□□ 1.67
FBXO28-205ENST00000523990 CRKLP46109 303 aaKnown RBP25.47■■□□□ 1.67
FBXO28-205ENST00000523990 RPS6KA4O75676 772 aa25.46■■□□□ 1.67
FBXO28-205ENST00000523990 ADRA2BP18089 450 aa25.46■■□□□ 1.67
FBXO28-205ENST00000523990 DNAJC10Q8IXB1 793 aa25.46■■□□□ 1.67
FBXO28-205ENST00000523990 PLEKHF1Q96S99 279 aa25.46■■□□□ 1.67
FBXO28-205ENST00000523990 TRAPPC3LQ5T215 181 aa25.45■■□□□ 1.66
FBXO28-205ENST00000523990 TTC5Q8N0Z6 440 aa25.45■■□□□ 1.66
FBXO28-205ENST00000523990 VSIG10Q8N0Z9 540 aa25.45■■□□□ 1.66
FBXO28-205ENST00000523990 ZNF790Q6PG37 636 aa25.44■■□□□ 1.66
FBXO28-205ENST00000523990 KLHL34Q8N239 644 aa25.44■■□□□ 1.66
FBXO28-205ENST00000523990 KDM3BQ7LBC6 1761 aa25.43■■□□□ 1.66
FBXO28-205ENST00000523990 KIF13BQ9NQT8 1826 aa25.43■■□□□ 1.66
FBXO28-205ENST00000523990 MCM10Q7L590 875 aa25.43■■□□□ 1.66
FBXO28-205ENST00000523990 RTF1Q92541 710 aaKnown RBP25.43■■□□□ 1.66
FBXO28-205ENST00000523990 ARHGEF1Q92888 912 aaKnown RBP25.43■■□□□ 1.66
FBXO28-205ENST00000523990 PRKRIP1Q9H875 184 aaPredicted RBP25.43■■□□□ 1.66
FBXO28-205ENST00000523990 HTATSF1O43719 755 aaKnown RBP25.42■■□□□ 1.66
FBXO28-205ENST00000523990 INTS5Q6P9B9 1019 aaKnown RBP25.42■■□□□ 1.66
FBXO28-205ENST00000523990 HEG1Q9ULI3 1381 aa25.41■■□□□ 1.66
FBXO28-205ENST00000523990 NEFMP07197 916 aa25.41■■□□□ 1.66
FBXO28-205ENST00000523990 CYP19A1P11511 503 aaPredicted RBP25.41■■□□□ 1.66
FBXO28-205ENST00000523990 ZNF496Q96IT1 587 aaPredicted RBP25.41■■□□□ 1.66
FBXO28-205ENST00000523990 CCDC87Q9NVE4 849 aa25.41■■□□□ 1.66
FBXO28-205ENST00000523990 DCTN1Q14203 1278 aa25.4■■□□□ 1.66
FBXO28-205ENST00000523990 DCAF8L1A6NGE4 600 aa25.39■■□□□ 1.66
FBXO28-205ENST00000523990 RFC4P35249 363 aa25.39■■□□□ 1.66
FBXO28-205ENST00000523990 NLGN2Q8NFZ4 835 aa25.39■■□□□ 1.66
FBXO28-205ENST00000523990 BTBD11A6QL63 1104 aa25.38■■□□□ 1.65
FBXO28-205ENST00000523990 PNNQ9H307 717 aaKnown RBP25.38■■□□□ 1.65
FBXO28-205ENST00000523990 CHD4Q14839 1912 aa25.38■■□□□ 1.65
FBXO28-205ENST00000523990 SOS1Q07889 1333 aaPredicted RBP25.38■■□□□ 1.65
FBXO28-205ENST00000523990 MAPK8IP3Q9UPT6 1336 aa25.38■■□□□ 1.65
FBXO28-205ENST00000523990 GYS1P13807 737 aa25.37■■□□□ 1.65
FBXO28-205ENST00000523990 NFE2L2Q16236 605 aa25.37■■□□□ 1.65
FBXO28-205ENST00000523990 LAMB4A4D0S4 1761 aa25.37■■□□□ 1.65
FBXO28-205ENST00000523990 KIAA1551Q9HCM1 1747 aa25.37■■□□□ 1.65
FBXO28-205ENST00000523990 ZBTB1Q9Y2K1 713 aa25.37■■□□□ 1.65
FBXO28-205ENST00000523990 USP42Q9H9J4 1324 aaKnown RBP25.36■■□□□ 1.65
FBXO28-205ENST00000523990 KCNQ3O43525 872 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms