RNA–Protein interactions for RNA: ENST00000523811.2

MTCL1-215, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 3

Gene MTCL1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-215ENST00000523811 NFE2L2Q16236 605 aa22.03■■□□□ 1.12
MTCL1-215ENST00000523811 DIEXFQ68CQ4 756 aaKnown RBP22.03■■□□□ 1.12
MTCL1-215ENST00000523811 ATG3Q9NT62 314 aa22.03■■□□□ 1.12
MTCL1-215ENST00000523811 ASAP1Q9ULH1 1129 aa22.03■■□□□ 1.12
MTCL1-215ENST00000523811 MAPK8IP3Q9UPT6 1336 aa22.03■■□□□ 1.12
MTCL1-215ENST00000523811 RUNDC1Q96C34 613 aa22.02■■□□□ 1.12
MTCL1-215ENST00000523811 SLC52A2Q9HAB3 445 aa22.02■■□□□ 1.12
MTCL1-215ENST00000523811 LRRC4BQ9NT99 713 aa22.02■■□□□ 1.12
MTCL1-215ENST00000523811 COL5A3P25940 1745 aaPredicted RBP22.02■■□□□ 1.12
MTCL1-215ENST00000523811 PALLDQ8WX93 1383 aa22.01■■□□□ 1.11
MTCL1-215ENST00000523811 TJP1Q07157 1748 aa22■■□□□ 1.11
MTCL1-215ENST00000523811 NEFMP07197 916 aa22■■□□□ 1.11
MTCL1-215ENST00000523811 MCM10Q7L590 875 aa22■■□□□ 1.11
MTCL1-215ENST00000523811 QSER1Q2KHR3 1735 aa22■■□□□ 1.11
MTCL1-215ENST00000523811 CICQ96RK0 1608 aaPredicted RBP21.99■■□□□ 1.11
MTCL1-215ENST00000523811 TMPOP42166 694 aaKnown RBP21.99■■□□□ 1.11
MTCL1-215ENST00000523811 KCNQ4P56696 695 aa21.99■■□□□ 1.11
MTCL1-215ENST00000523811 DCTN1Q14203 1278 aa21.99■■□□□ 1.11
MTCL1-215ENST00000523811 KDM3BQ7LBC6 1761 aa21.99■■□□□ 1.11
MTCL1-215ENST00000523811 HTATSF1O43719 755 aaKnown RBP21.98■■□□□ 1.11
MTCL1-215ENST00000523811 SMARCC1Q92922 1105 aaPredicted RBP21.98■■□□□ 1.11
MTCL1-215ENST00000523811 MYH14Q7Z406 1995 aaKnown RBP21.98■■□□□ 1.11
MTCL1-215ENST00000523811 UBR3Q6ZT12 1888 aa21.96■■□□□ 1.11
MTCL1-215ENST00000523811 KCPQ6ZWJ8 1503 aa21.96■■□□□ 1.11
MTCL1-215ENST00000523811 RRP7AQ9Y3A4 280 aaKnown RBP21.96■■□□□ 1.11
MTCL1-215ENST00000523811 C4BP0C0L5 1744 aa21.96■■□□□ 1.11
MTCL1-215ENST00000523811 RIPK4P57078 832 aa21.95■■□□□ 1.1
MTCL1-215ENST00000523811 SLC27A3Q5K4L6 730 aa21.95■■□□□ 1.1
MTCL1-215ENST00000523811 RTF1Q92541 710 aaKnown RBP21.95■■□□□ 1.1
MTCL1-215ENST00000523811 SLC4A9Q96Q91 983 aa21.95■■□□□ 1.1
MTCL1-215ENST00000523811 ANO8Q9HCE9 1232 aaPredicted RBP21.95■■□□□ 1.1
MTCL1-215ENST00000523811 CCNL1Q9UK58 526 aaPredicted RBP21.95■■□□□ 1.1
MTCL1-215ENST00000523811 SLC39A6Q13433 755 aa21.94■■□□□ 1.1
MTCL1-215ENST00000523811 THUMPD2Q9BTF0 503 aaKnown RBP21.94■■□□□ 1.1
MTCL1-215ENST00000523811 CASZ1Q86V15 1759 aa21.94■■□□□ 1.1
MTCL1-215ENST00000523811 LOC102724428A0A0B4J2F2 783 aa21.93■■□□□ 1.1
MTCL1-215ENST00000523811 APAF1O14727 1248 aa21.93■■□□□ 1.1
MTCL1-215ENST00000523811 SIK1P57059 783 aa21.93■■□□□ 1.1
MTCL1-215ENST00000523811 TEFQ10587 303 aa21.93■■□□□ 1.1
MTCL1-215ENST00000523811 MIER1Q8N108 512 aa21.93■■□□□ 1.1
MTCL1-215ENST00000523811 CCER2I3L3R5 266 aa21.92■■□□□ 1.1
MTCL1-215ENST00000523811 TRIM35Q9UPQ4 493 aa21.92■■□□□ 1.1
MTCL1-215ENST00000523811 ITPK1Q13572 414 aa21.91■■□□□ 1.1
MTCL1-215ENST00000523811 NEUROD2Q15784 382 aa21.91■■□□□ 1.1
MTCL1-215ENST00000523811 ZNF827Q17R98 1081 aa21.91■■□□□ 1.1
MTCL1-215ENST00000523811 FAM9BQ8IZU0 186 aa21.9■■□□□ 1.1
MTCL1-215ENST00000523811 RBM42Q9BTD8 480 aaKnown RBP21.9■■□□□ 1.1
MTCL1-215ENST00000523811 PSDA5PKW4 1024 aaPredicted RBP21.89■■□□□ 1.09
MTCL1-215ENST00000523811 KCNQ3O43525 872 aa21.89■■□□□ 1.09
MTCL1-215ENST00000523811 PTCD1O75127 700 aaKnown RBP21.89■■□□□ 1.09
MTCL1-215ENST00000523811 R3HDM1Q15032 1099 aaKnown RBP21.89■■□□□ 1.09
MTCL1-215ENST00000523811 AKT1S1Q96B36 256 aa21.89■■□□□ 1.09
MTCL1-215ENST00000523811 NBPF14Q5TI25 921 aa21.88■■□□□ 1.09
MTCL1-215ENST00000523811 LINC00116Q8NCU8 138 aa21.88■■□□□ 1.09
MTCL1-215ENST00000523811 SENP3-EIF4A1A0A087X0R7 540 aa21.87■■□□□ 1.09
MTCL1-215ENST00000523811 BTBD11A6QL63 1104 aa21.87■■□□□ 1.09
MTCL1-215ENST00000523811 ATP6V1AP38606 617 aa21.87■■□□□ 1.09
MTCL1-215ENST00000523811 TAF7Q15545 349 aaPredicted RBP21.87■■□□□ 1.09
MTCL1-215ENST00000523811 SLC15A2Q16348 729 aa21.87■■□□□ 1.09
MTCL1-215ENST00000523811 ZNF790Q6PG37 636 aa21.87■■□□□ 1.09
MTCL1-215ENST00000523811 STK32BQ9NY57 414 aa21.86■■□□□ 1.09
MTCL1-215ENST00000523811 LAMB4A4D0S4 1761 aa21.85■■□□□ 1.09
MTCL1-215ENST00000523811 LMOD3Q0VAK6 560 aa21.85■■□□□ 1.09
MTCL1-215ENST00000523811 ZNF496Q96IT1 587 aaPredicted RBP21.85■■□□□ 1.09
MTCL1-215ENST00000523811 MIS18AQ9NYP9 233 aa21.85■■□□□ 1.09
MTCL1-215ENST00000523811 PDGFDQ9GZP0 370 aaPredicted RBP21.83■■□□□ 1.09
MTCL1-215ENST00000523811 C4AP0C0L4 1744 aa21.83■■□□□ 1.08
MTCL1-215ENST00000523811 AMIGO3Q86WK7 504 aa21.82■■□□□ 1.08
MTCL1-215ENST00000523811 DNAJC10Q8IXB1 793 aa21.82■■□□□ 1.08
MTCL1-215ENST00000523811 TTC5Q8N0Z6 440 aa21.82■■□□□ 1.08
MTCL1-215ENST00000523811 COL24A1Q17RW2 1714 aa21.82■■□□□ 1.08
MTCL1-215ENST00000523811 HEG1Q9ULI3 1381 aa21.82■■□□□ 1.08
MTCL1-215ENST00000523811 VSIG10Q8N0Z9 540 aa21.8■■□□□ 1.08
MTCL1-215ENST00000523811 PNPLA7Q6ZV29 1317 aa21.8■■□□□ 1.08
MTCL1-215ENST00000523811 FMNL2Q96PY5 1086 aa21.79■■□□□ 1.08
MTCL1-215ENST00000523811 SMIM5Q71RC9 77 aa21.78■■□□□ 1.08
MTCL1-215ENST00000523811 TFCP2L1Q9NZI6 479 aa21.78■■□□□ 1.08
MTCL1-215ENST00000523811 CNTNAP4Q9C0A0 1308 aa21.78■■□□□ 1.08
MTCL1-215ENST00000523811 PRAMEF22A3QJZ6 481 aa21.77■■□□□ 1.08
MTCL1-215ENST00000523811 CYP19A1P11511 503 aaPredicted RBP21.77■■□□□ 1.08
MTCL1-215ENST00000523811 CCDC27Q2M243 656 aa21.77■■□□□ 1.08
MTCL1-215ENST00000523811 NCBP3Q53F19 620 aaKnown RBP21.77■■□□□ 1.08
MTCL1-215ENST00000523811 RC3H1Q5TC82 1133 aaKnown RBP21.77■■□□□ 1.08
MTCL1-215ENST00000523811 CHL1O00533 1208 aa21.76■■□□□ 1.07
MTCL1-215ENST00000523811 HMGB2P26583 209 aaKnown RBP21.76■■□□□ 1.07
MTCL1-215ENST00000523811 EIF4A1P60842 406 aaKnown RBP21.76■■□□□ 1.07
MTCL1-215ENST00000523811 AK7Q96M32 723 aa21.76■■□□□ 1.07
MTCL1-215ENST00000523811 BABAM1Q9NWV8 329 aa21.76■■□□□ 1.07
MTCL1-215ENST00000523811 ZNF853P0CG23 659 aa21.75■■□□□ 1.07
MTCL1-215ENST00000523811 CRKLP46109 303 aaKnown RBP21.75■■□□□ 1.07
MTCL1-215ENST00000523811 INTS5Q6P9B9 1019 aaKnown RBP21.75■■□□□ 1.07
MTCL1-215ENST00000523811 WWC1Q8IX03 1113 aa21.75■■□□□ 1.07
MTCL1-215ENST00000523811 TSPYL4Q9UJ04 414 aa21.75■■□□□ 1.07
MTCL1-215ENST00000523811 LRP5O75197 1615 aa21.74■■□□□ 1.07
MTCL1-215ENST00000523811 COL23A1Q86Y22 540 aaPredicted RBP21.74■■□□□ 1.07
MTCL1-215ENST00000523811 GNPATO15228 680 aa21.73■■□□□ 1.07
MTCL1-215ENST00000523811 CFAP44Q96MT7 982 aa21.73■■□□□ 1.07
MTCL1-215ENST00000523811 SALL2Q9Y467 1007 aaPredicted RBP21.73■■□□□ 1.07
MTCL1-215ENST00000523811 LAS1LQ9Y4W2 734 aaKnown RBP21.73■■□□□ 1.07
MTCL1-215ENST00000523811 CCDC87Q9NVE4 849 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms