RNA–Protein interactions for RNA: ENST00000523588.1

CPNE3-207, Transcript of copine 3, humanhuman

TSL 2

Gene CPNE3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-207ENST00000523588 USP17L11C9JVI0 530 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 USP17L21D6R901 530 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 USP17L18D6R9N7 530 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 USP17L22D6RA61 530 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 USP17L17D6RBQ6 530 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 USP17L19D6RCP7 530 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 USP17L20D6RJB6 530 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 GPC1P35052 558 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 CENPCQ03188 943 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 USP17L24Q0WX57 530 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 LARP1Q6PKG0 1096 aaKnown RBP10.8□□□□□ -0.68
CPNE3-207ENST00000523588 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.8□□□□□ -0.68
CPNE3-207ENST00000523588 NLRP3Q96P20 1036 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 ARID3AQ99856 593 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 ZNF358Q9NW07 568 aa10.8□□□□□ -0.68
CPNE3-207ENST00000523588 SLC4A9Q96Q91 983 aa10.79□□□□□ -0.68
CPNE3-207ENST00000523588 FHDC1Q9C0D6 1143 aaPredicted RBP10.79□□□□□ -0.68
CPNE3-207ENST00000523588 GRIP2Q9C0E4 1043 aa10.79□□□□□ -0.68
CPNE3-207ENST00000523588 FIGNL2A6NMB9 653 aa10.78□□□□□ -0.68
CPNE3-207ENST00000523588 SOBPA7XYQ1 873 aa10.78□□□□□ -0.68
CPNE3-207ENST00000523588 ARXQ96QS3 562 aa10.78□□□□□ -0.68
CPNE3-207ENST00000523588 SERTAD1Q9UHV2 236 aa10.78□□□□□ -0.68
CPNE3-207ENST00000523588 ZNF787Q6DD87 383 aa10.77□□□□□ -0.69
CPNE3-207ENST00000523588 ANKMY2Q8IV38 441 aa10.77□□□□□ -0.69
CPNE3-207ENST00000523588 SFI1A8K8P3 1242 aa10.76□□□□□ -0.69
CPNE3-207ENST00000523588 MAN1A2O60476 641 aa10.76□□□□□ -0.69
CPNE3-207ENST00000523588 ATG7O95352 703 aa10.76□□□□□ -0.69
CPNE3-207ENST00000523588 SMTNP53814 917 aa10.76□□□□□ -0.69
CPNE3-207ENST00000523588 DPYDQ12882 1025 aa10.76□□□□□ -0.69
CPNE3-207ENST00000523588 ELOAQ14241 798 aaKnown RBP10.75□□□□□ -0.69
CPNE3-207ENST00000523588 ZMIZ1Q9ULJ6 1067 aa10.75□□□□□ -0.69
CPNE3-207ENST00000523588 M0R2N6 131 aa10.74□□□□□ -0.69
CPNE3-207ENST00000523588 BACH1O14867 736 aa10.74□□□□□ -0.69
CPNE3-207ENST00000523588 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
CPNE3-207ENST00000523588 EPHA4P54764 986 aa10.74□□□□□ -0.69
CPNE3-207ENST00000523588 MTFR1Q15390 333 aa10.74□□□□□ -0.69
CPNE3-207ENST00000523588 TLR1Q15399 786 aa10.74□□□□□ -0.69
CPNE3-207ENST00000523588 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.74□□□□□ -0.69
CPNE3-207ENST00000523588 SLC27A3Q5K4L6 730 aa10.74□□□□□ -0.69
CPNE3-207ENST00000523588 LYSMD3Q7Z3D4 306 aa10.74□□□□□ -0.69
CPNE3-207ENST00000523588 NOVA2Q9UNW9 492 aaKnown RBP10.74□□□□□ -0.69
CPNE3-207ENST00000523588 A6NJY4 79 aa10.73□□□□□ -0.69
CPNE3-207ENST00000523588 SPATA31C2B4DYI2 1134 aa10.73□□□□□ -0.69
CPNE3-207ENST00000523588 SEC13P55735 322 aa10.73□□□□□ -0.69
CPNE3-207ENST00000523588 PRICKLE2Q7Z3G6 844 aa10.73□□□□□ -0.69
CPNE3-207ENST00000523588 ZSCAN10Q96SZ4 725 aaPredicted RBP10.73□□□□□ -0.69
CPNE3-207ENST00000523588 PPARGC1BQ86YN6 1023 aaKnown RBP10.72□□□□□ -0.69
CPNE3-207ENST00000523588 TNS4Q8IZW8 715 aa10.72□□□□□ -0.69
CPNE3-207ENST00000523588 IQSEC3Q9UPP2 1182 aaPredicted RBP10.72□□□□□ -0.69
CPNE3-207ENST00000523588 ZNF295-AS1Q8N0V1 137 aa10.71□□□□□ -0.69
CPNE3-207ENST00000523588 TSEN2Q8NCE0 465 aaKnown RBP10.71□□□□□ -0.69
CPNE3-207ENST00000523588 FAM200AQ8TCP9 573 aa10.71□□□□□ -0.69
CPNE3-207ENST00000523588 SCHIP1Q9P0W5 487 aaPredicted RBP10.71□□□□□ -0.69
CPNE3-207ENST00000523588 RBM19Q9Y4C8 960 aaKnown RBP10.71□□□□□ -0.69
CPNE3-207ENST00000523588 USP3Q9Y6I4 520 aa10.71□□□□□ -0.69
CPNE3-207ENST00000523588 CDK2AP1O14519 115 aa10.7□□□□□ -0.7
CPNE3-207ENST00000523588 FOXK2Q01167 660 aa10.7□□□□□ -0.7
CPNE3-207ENST00000523588 POU4F2Q12837 409 aa10.7□□□□□ -0.7
CPNE3-207ENST00000523588 STK32AQ8WU08 396 aa10.7□□□□□ -0.7
CPNE3-207ENST00000523588 RHOQP17081 205 aa10.69□□□□□ -0.7
CPNE3-207ENST00000523588 TMEM214Q6NUQ4 689 aaKnown RBP10.69□□□□□ -0.7
CPNE3-207ENST00000523588 NBPF10Q6P3W6 841 aaKnown RBP10.69□□□□□ -0.7
CPNE3-207ENST00000523588 NBPF15Q8N660 670 aa10.69□□□□□ -0.7
CPNE3-207ENST00000523588 SENP3-EIF4A1A0A087X0R7 540 aa10.68□□□□□ -0.7
CPNE3-207ENST00000523588 PTSQ03393 145 aa10.68□□□□□ -0.7
CPNE3-207ENST00000523588 FAM69CQ0P6D2 419 aa10.68□□□□□ -0.7
CPNE3-207ENST00000523588 RHBDD1Q8TEB9 315 aa10.68□□□□□ -0.7
CPNE3-207ENST00000523588 C4orf17Q53FE4 359 aa10.67□□□□□ -0.7
CPNE3-207ENST00000523588 WDR44Q5JSH3 913 aa10.67□□□□□ -0.7
CPNE3-207ENST00000523588 TAS1R3Q7RTX0 852 aa10.67□□□□□ -0.7
CPNE3-207ENST00000523588 TMEM164Q5U3C3 297 aa10.66□□□□□ -0.7
CPNE3-207ENST00000523588 ACIN1Q9UKV3 1341 aaKnown RBP10.65□□□□□ -0.7
CPNE3-207ENST00000523588 SLC35F4A4IF30 521 aa10.65□□□□□ -0.7
CPNE3-207ENST00000523588 GTF2E1P29083 439 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-207ENST00000523588 GNASQ5JWF2 1037 aa10.65□□□□□ -0.7
CPNE3-207ENST00000523588 TBCELQ5QJ74 424 aa10.65□□□□□ -0.7
CPNE3-207ENST00000523588 SLC9A9Q8IVB4 645 aa10.65□□□□□ -0.7
CPNE3-207ENST00000523588 HINFPQ9BQA5 517 aa10.65□□□□□ -0.7
CPNE3-207ENST00000523588 TSPAN10Q9H1Z9 355 aaPredicted RBP10.65□□□□□ -0.7
CPNE3-207ENST00000523588 C21orf2O43822 256 aa10.64□□□□□ -0.71
CPNE3-207ENST00000523588 LGR5O75473 907 aa10.64□□□□□ -0.71
CPNE3-207ENST00000523588 PHKA2P46019 1235 aa10.64□□□□□ -0.71
CPNE3-207ENST00000523588 ZDHHC1Q8WTX9 485 aa10.63□□□□□ -0.71
CPNE3-207ENST00000523588 NIFKQ9BYG3 293 aaKnown RBP10.63□□□□□ -0.71
CPNE3-207ENST00000523588 SWI5Q1ZZU3 235 aa10.62□□□□□ -0.71
CPNE3-207ENST00000523588 CCDC155Q8N6L0 562 aa10.62□□□□□ -0.71
CPNE3-207ENST00000523588 ATAD2Q6PL18 1390 aa10.62□□□□□ -0.71
CPNE3-207ENST00000523588 TMEM88BA6NKF7 163 aa10.61□□□□□ -0.71
CPNE3-207ENST00000523588 WEE1P30291 646 aa10.61□□□□□ -0.71
CPNE3-207ENST00000523588 TEAD4Q15561 434 aa10.61□□□□□ -0.71
CPNE3-207ENST00000523588 TIMMDC1Q9NPL8 285 aa10.61□□□□□ -0.71
CPNE3-207ENST00000523588 CABP1Q9NZU7 370 aa10.61□□□□□ -0.71
CPNE3-207ENST00000523588 SLAIN2Q9P270 581 aa10.61□□□□□ -0.71
CPNE3-207ENST00000523588 NXF1Q9UBU9 619 aaKnown RBP10.61□□□□□ -0.71
CPNE3-207ENST00000523588 DYRK1BQ9Y463 629 aa10.61□□□□□ -0.71
CPNE3-207ENST00000523588 PLA2G4AP47712 749 aa10.6□□□□□ -0.71
CPNE3-207ENST00000523588 POTEAQ6S8J7 498 aa10.6□□□□□ -0.71
CPNE3-207ENST00000523588 SCG3Q8WXD2 468 aaKnown RBP10.6□□□□□ -0.71
CPNE3-207ENST00000523588 PARP3Q9Y6F1 533 aa10.6□□□□□ -0.71
CPNE3-207ENST00000523588 PPFIA3O75145 1194 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms