RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 ERVV-2B6SEH9 535 aa12.81□□□□□ -0.36
PABPC1-222ENST00000523555 SIK1P57059 783 aa12.81□□□□□ -0.36
PABPC1-222ENST00000523555 ITPK1Q13572 414 aa12.81□□□□□ -0.36
PABPC1-222ENST00000523555 AKAP4Q5JQC9 854 aa12.81□□□□□ -0.36
PABPC1-222ENST00000523555 LINC00116Q8NCU8 138 aa12.81□□□□□ -0.36
PABPC1-222ENST00000523555 RSPH6AQ9H0K4 717 aa12.81□□□□□ -0.36
PABPC1-222ENST00000523555 SPON1Q9HCB6 807 aa12.81□□□□□ -0.36
PABPC1-222ENST00000523555 UBR2Q8IWV8 1755 aa12.8□□□□□ -0.36
PABPC1-222ENST00000523555 HSP90AB1P08238 724 aaKnown RBP12.8□□□□□ -0.36
PABPC1-222ENST00000523555 NFATC2IPQ8NCF5 419 aa12.8□□□□□ -0.36
PABPC1-222ENST00000523555 SMARCC1Q92922 1105 aaPredicted RBP12.8□□□□□ -0.36
PABPC1-222ENST00000523555 PHACTR3Q96KR7 559 aa12.8□□□□□ -0.36
PABPC1-222ENST00000523555 CFAP53Q96M91 514 aa12.8□□□□□ -0.36
PABPC1-222ENST00000523555 SGIP1Q9BQI5 828 aa12.8□□□□□ -0.36
PABPC1-222ENST00000523555 TFCP2L1Q9NZI6 479 aa12.8□□□□□ -0.36
PABPC1-222ENST00000523555 RNMTO43148 476 aaKnown RBP12.79□□□□□ -0.36
PABPC1-222ENST00000523555 PRKAR2BP31323 418 aa12.79□□□□□ -0.36
PABPC1-222ENST00000523555 CABP4P57796 275 aa12.79□□□□□ -0.36
PABPC1-222ENST00000523555 COL23A1Q86Y22 540 aaPredicted RBP12.79□□□□□ -0.36
PABPC1-222ENST00000523555 CICQ96RK0 1608 aaPredicted RBP12.79□□□□□ -0.36
PABPC1-222ENST00000523555 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
PABPC1-222ENST00000523555 UTRNP46939 3433 aa12.78□□□□□ -0.36
PABPC1-222ENST00000523555 C4AP0C0L4 1744 aa12.78□□□□□ -0.36
PABPC1-222ENST00000523555 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
PABPC1-222ENST00000523555 U2AF1L5P0DN76 240 aaPredicted RBP12.77□□□□□ -0.37
PABPC1-222ENST00000523555 ATP6V1AP38606 617 aa12.77□□□□□ -0.37
PABPC1-222ENST00000523555 U2AF1Q01081 240 aaKnown RBP eCLIP12.77□□□□□ -0.37
PABPC1-222ENST00000523555 RBM42Q9BTD8 480 aaKnown RBP12.77□□□□□ -0.37
PABPC1-222ENST00000523555 SLC52A2Q9HAB3 445 aa12.77□□□□□ -0.37
PABPC1-222ENST00000523555 ZEB1P37275 1124 aaPredicted RBP12.76□□□□□ -0.37
PABPC1-222ENST00000523555 SLC39A6Q13433 755 aa12.76□□□□□ -0.37
PABPC1-222ENST00000523555 IL17REQ8NFR9 667 aa12.76□□□□□ -0.37
PABPC1-222ENST00000523555 MAP3K5Q99683 1374 aa12.76□□□□□ -0.37
PABPC1-222ENST00000523555 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
PABPC1-222ENST00000523555 PHF14O94880 888 aa12.75□□□□□ -0.37
PABPC1-222ENST00000523555 PPP1R1BQ9UD71 204 aaPredicted RBP12.75□□□□□ -0.37
PABPC1-222ENST00000523555 NUDCQ9Y266 331 aa12.75□□□□□ -0.37
PABPC1-222ENST00000523555 MSH5O43196 834 aa12.74□□□□□ -0.37
PABPC1-222ENST00000523555 MSL1Q68DK7 614 aa12.74□□□□□ -0.37
PABPC1-222ENST00000523555 GAS2L2Q8NHY3 880 aa12.74□□□□□ -0.37
PABPC1-222ENST00000523555 AK7Q96M32 723 aa12.74□□□□□ -0.37
PABPC1-222ENST00000523555 GOLGB1Q14789 3259 aaKnown RBP12.74□□□□□ -0.37
PABPC1-222ENST00000523555 GNAT3A8MTJ3 354 aa12.73□□□□□ -0.37
PABPC1-222ENST00000523555 RALBP1Q15311 655 aa12.73□□□□□ -0.37
PABPC1-222ENST00000523555 CEMIPQ8WUJ3 1361 aa12.72□□□□□ -0.37
PABPC1-222ENST00000523555 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
PABPC1-222ENST00000523555 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.72□□□□□ -0.37
PABPC1-222ENST00000523555 GNPATO15228 680 aa12.72□□□□□ -0.37
PABPC1-222ENST00000523555 FCHSD2O94868 740 aa12.72□□□□□ -0.37
PABPC1-222ENST00000523555 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
PABPC1-222ENST00000523555 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
PABPC1-222ENST00000523555 PLEKHF1Q96S99 279 aa12.72□□□□□ -0.37
PABPC1-222ENST00000523555 FHDC1Q9C0D6 1143 aaPredicted RBP12.72□□□□□ -0.37
PABPC1-222ENST00000523555 MCM10Q7L590 875 aa12.71□□□□□ -0.37
PABPC1-222ENST00000523555 ARXQ96QS3 562 aa12.71□□□□□ -0.37
PABPC1-222ENST00000523555 CNTNAP4Q9C0A0 1308 aa12.7□□□□□ -0.38
PABPC1-222ENST00000523555 KCNQ3O43525 872 aa12.7□□□□□ -0.38
PABPC1-222ENST00000523555 SSFA2P28290 1259 aa12.7□□□□□ -0.38
PABPC1-222ENST00000523555 DNAJC10Q8IXB1 793 aa12.7□□□□□ -0.38
PABPC1-222ENST00000523555 PRKRIP1Q9H875 184 aaPredicted RBP12.7□□□□□ -0.38
PABPC1-222ENST00000523555 KDM3BQ7LBC6 1761 aa12.69□□□□□ -0.38
PABPC1-222ENST00000523555 CRKLP46109 303 aaKnown RBP12.69□□□□□ -0.38
PABPC1-222ENST00000523555 SYT17Q9BSW7 474 aa12.69□□□□□ -0.38
PABPC1-222ENST00000523555 TEFQ10587 303 aa12.68□□□□□ -0.38
PABPC1-222ENST00000523555 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
PABPC1-222ENST00000523555 INTS5Q6P9B9 1019 aaKnown RBP12.68□□□□□ -0.38
PABPC1-222ENST00000523555 ZNF316A6NFI3 1004 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-222ENST00000523555 RPS6KA4O75676 772 aa12.67□□□□□ -0.38
PABPC1-222ENST00000523555 POLD1P28340 1107 aa12.67□□□□□ -0.38
PABPC1-222ENST00000523555 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
PABPC1-222ENST00000523555 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
PABPC1-222ENST00000523555 ARHGEF1Q92888 912 aaKnown RBP12.67□□□□□ -0.38
PABPC1-222ENST00000523555 ZNF496Q96IT1 587 aaPredicted RBP12.67□□□□□ -0.38
PABPC1-222ENST00000523555 RTCBQ9Y3I0 505 aaKnown RBP12.67□□□□□ -0.38
PABPC1-222ENST00000523555 KIAA1551Q9HCM1 1747 aa12.66□□□□□ -0.38
PABPC1-222ENST00000523555 CYP19A1P11511 503 aaPredicted RBP12.66□□□□□ -0.38
PABPC1-222ENST00000523555 ZNF790Q6PG37 636 aa12.66□□□□□ -0.38
PABPC1-222ENST00000523555 NLGN2Q8NFZ4 835 aa12.66□□□□□ -0.38
PABPC1-222ENST00000523555 THUMPD2Q9BTF0 503 aaKnown RBP12.66□□□□□ -0.38
PABPC1-222ENST00000523555 KIF13BQ9NQT8 1826 aa12.66□□□□□ -0.38
PABPC1-222ENST00000523555 HEG1Q9ULI3 1381 aa12.66□□□□□ -0.38
PABPC1-222ENST00000523555 PRAMEF22A3QJZ6 481 aa12.65□□□□□ -0.38
PABPC1-222ENST00000523555 BTBD11A6QL63 1104 aa12.65□□□□□ -0.38
PABPC1-222ENST00000523555 NFE2L2Q16236 605 aa12.65□□□□□ -0.38
PABPC1-222ENST00000523555 CCDC184Q52MB2 194 aa12.65□□□□□ -0.38
PABPC1-222ENST00000523555 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
PABPC1-222ENST00000523555 CCDC146Q8IYE0 955 aa12.65□□□□□ -0.38
PABPC1-222ENST00000523555 SRP68Q9UHB9 627 aaKnown RBP12.65□□□□□ -0.38
PABPC1-222ENST00000523555 ZBTB1Q9Y2K1 713 aa12.65□□□□□ -0.38
PABPC1-222ENST00000523555 LAMB4A4D0S4 1761 aa12.64□□□□□ -0.39
PABPC1-222ENST00000523555 N4BP2Q86UW6 1770 aaPredicted RBP12.64□□□□□ -0.39
PABPC1-222ENST00000523555 HMGB2P26583 209 aaKnown RBP12.64□□□□□ -0.39
PABPC1-222ENST00000523555 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
PABPC1-222ENST00000523555 RTF1Q92541 710 aaKnown RBP12.64□□□□□ -0.39
PABPC1-222ENST00000523555 MIS18AQ9NYP9 233 aa12.64□□□□□ -0.39
PABPC1-222ENST00000523555 AFDNP55196 1824 aaKnown RBP12.64□□□□□ -0.39
PABPC1-222ENST00000523555 SOS1Q07889 1333 aaPredicted RBP12.63□□□□□ -0.39
PABPC1-222ENST00000523555 GYS1P13807 737 aa12.63□□□□□ -0.39
PABPC1-222ENST00000523555 VSIG10Q8N0Z9 540 aa12.63□□□□□ -0.39
PABPC1-222ENST00000523555 CCDC87Q9NVE4 849 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms