RNA–Protein interactions for RNA: ENST00000523271.1

EXTL3-214, Transcript of exostosin like glycosyltransferase 3, humanhuman

TSL 2

Gene EXTL3, Length 8,257 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-214ENST00000523271 KRT32Q14532 448 aa14.37□□□□□ -0.11
EXTL3-214ENST00000523271 CWC25Q9NXE8 425 aaPredicted RBP14.37□□□□□ -0.11
EXTL3-214ENST00000523271 CTNNA3Q9UI47 895 aa14.37□□□□□ -0.11
EXTL3-214ENST00000523271 PDS5BQ9NTI5 1447 aa14.37□□□□□ -0.11
EXTL3-214ENST00000523271 TTC14Q96N46 770 aa14.37□□□□□ -0.11
EXTL3-214ENST00000523271 NUP88Q99567 741 aaPredicted RBP14.37□□□□□ -0.11
EXTL3-214ENST00000523271 MAP3K9P80192 1104 aa14.37□□□□□ -0.11
EXTL3-214ENST00000523271 SCLT1Q96NL6 688 aa14.37□□□□□ -0.11
EXTL3-214ENST00000523271 NEMFO60524 1076 aa14.37□□□□□ -0.11
EXTL3-214ENST00000523271 EHBP1Q8NDI1 1231 aa14.37□□□□□ -0.11
EXTL3-214ENST00000523271 K7ELQ4 463 aaPredicted RBP14.37□□□□□ -0.11
EXTL3-214ENST00000523271 TOP1P11387 765 aaKnown RBP14.37□□□□□ -0.11
EXTL3-214ENST00000523271 PHAXQ9H814 394 aaKnown RBP14.37□□□□□ -0.11
EXTL3-214ENST00000523271 CCDC110Q8TBZ0 833 aa14.37□□□□□ -0.11
EXTL3-214ENST00000523271 SURF6O75683 361 aaKnown RBP14.36□□□□□ -0.11
EXTL3-214ENST00000523271 SRCIN1Q9C0H9 1055 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 PPP6R1Q9UPN7 881 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 YEATS4O95619 227 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 GMNNO75496 209 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 GCC1Q96CN9 775 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 URI1O94763 535 aaPredicted RBP14.36□□□□□ -0.11
EXTL3-214ENST00000523271 CEP120Q8N960 986 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 SEPT10Q9P0V9 454 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 FAM184BQ9ULE4 1060 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 TACC1O75410 805 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 ZSCAN31Q96LW9 406 aaPredicted RBP14.36□□□□□ -0.11
EXTL3-214ENST00000523271 KIF21BO75037 1637 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 GTF2F1P35269 517 aaKnown RBP eCLIP14.36□□□□□ -0.11
EXTL3-214ENST00000523271 STK3Q13188 491 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 APAF1O14727 1248 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 ARL1P40616 181 aaPredicted RBP14.36□□□□□ -0.11
EXTL3-214ENST00000523271 KIF5AQ12840 1032 aa14.36□□□□□ -0.11
EXTL3-214ENST00000523271 SMG6Q86US8 1419 aaKnown RBP14.36□□□□□ -0.11
EXTL3-214ENST00000523271 RGS22Q8NE09 1264 aa14.35□□□□□ -0.11
EXTL3-214ENST00000523271 SMC1BQ8NDV3 1235 aa14.35□□□□□ -0.11
EXTL3-214ENST00000523271 TTC12Q9H892 705 aaPredicted RBP14.35□□□□□ -0.11
EXTL3-214ENST00000523271 ANO10Q9NW15 660 aa14.35□□□□□ -0.11
EXTL3-214ENST00000523271 WDHD1O75717 1129 aaPredicted RBP14.35□□□□□ -0.11
EXTL3-214ENST00000523271 GNAI2P04899 355 aa14.35□□□□□ -0.11
EXTL3-214ENST00000523271 CCDC174Q6PII3 467 aa14.35□□□□□ -0.11
EXTL3-214ENST00000523271 FAM114A2Q9NRY5 505 aa14.35□□□□□ -0.11
EXTL3-214ENST00000523271 STIM2Q9P246 746 aa14.35□□□□□ -0.11
EXTL3-214ENST00000523271 NDC80O14777 642 aa14.34□□□□□ -0.11
EXTL3-214ENST00000523271 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
EXTL3-214ENST00000523271 RBM5P52756 815 aaKnown RBP eCLIP14.34□□□□□ -0.11
EXTL3-214ENST00000523271 GSDMDP57764 484 aa14.34□□□□□ -0.11
EXTL3-214ENST00000523271 KIF5BP33176 963 aa14.34□□□□□ -0.11
EXTL3-214ENST00000523271 TTC36A6NLP5 189 aa14.34□□□□□ -0.11
EXTL3-214ENST00000523271 CUX2O14529 1486 aa14.33□□□□□ -0.11
EXTL3-214ENST00000523271 CCDC172P0C7W6 258 aa14.33□□□□□ -0.12
EXTL3-214ENST00000523271 BLOC1S2Q6QNY1 142 aa14.33□□□□□ -0.12
EXTL3-214ENST00000523271 RASAL2Q9UJF2 1139 aa14.33□□□□□ -0.12
EXTL3-214ENST00000523271 KIAA0753Q2KHM9 967 aa14.33□□□□□ -0.12
EXTL3-214ENST00000523271 CIZ1Q9ULV3 898 aaPredicted RBP14.33□□□□□ -0.12
EXTL3-214ENST00000523271 RSRC1Q96IZ7 334 aaKnown RBP14.33□□□□□ -0.12
EXTL3-214ENST00000523271 CTAGE5O15320 804 aa14.33□□□□□ -0.12
EXTL3-214ENST00000523271 CCDC14Q49A88 953 aa14.33□□□□□ -0.12
EXTL3-214ENST00000523271 TTC21AQ8NDW8 1320 aa14.33□□□□□ -0.12
EXTL3-214ENST00000523271 SCAPERQ9BY12 1400 aa14.33□□□□□ -0.12
EXTL3-214ENST00000523271 TDO2P48775 406 aa14.32□□□□□ -0.12
EXTL3-214ENST00000523271 PRDM10Q9NQV6 1147 aa14.32□□□□□ -0.12
EXTL3-214ENST00000523271 DNAJC21Q5F1R6 531 aaKnown RBP14.32□□□□□ -0.12
EXTL3-214ENST00000523271 TMEM266Q2M3C6 531 aa14.32□□□□□ -0.12
EXTL3-214ENST00000523271 NUTM2DQ5VT03 806 aaPredicted RBP14.32□□□□□ -0.12
EXTL3-214ENST00000523271 TDRD12Q587J7 1177 aaKnown RBP14.32□□□□□ -0.12
EXTL3-214ENST00000523271 EHMT1Q9H9B1 1298 aa14.32□□□□□ -0.12
EXTL3-214ENST00000523271 ZBTB16Q05516 673 aa14.32□□□□□ -0.12
EXTL3-214ENST00000523271 GBP7Q8N8V2 638 aaPredicted RBP14.32□□□□□ -0.12
EXTL3-214ENST00000523271 HYPKQ9NX55 129 aa14.32□□□□□ -0.12
EXTL3-214ENST00000523271 PRPF4BQ13523 1007 aaKnown RBP14.31□□□□□ -0.12
EXTL3-214ENST00000523271 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
EXTL3-214ENST00000523271 SATB1Q01826 763 aa14.31□□□□□ -0.12
EXTL3-214ENST00000523271 PRPF31Q8WWY3 499 aaKnown RBP14.31□□□□□ -0.12
EXTL3-214ENST00000523271 USH1CQ9Y6N9 552 aa14.31□□□□□ -0.12
EXTL3-214ENST00000523271 STXBP4Q6ZWJ1 553 aa14.31□□□□□ -0.12
EXTL3-214ENST00000523271 STMN1P16949 149 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 KIAA1524Q8TCG1 905 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 USP47Q96K76 1375 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 SNX16P57768 344 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 CCDC183Q5T5S1 534 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 WIZO95785 1651 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 CCDC88BA6NC98 1476 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 SH3BP5O60239 455 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 SARNPP82979 210 aaKnown RBP14.3□□□□□ -0.12
EXTL3-214ENST00000523271 WDR63Q8IWG1 891 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 L3MBTL2Q969R5 705 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 CLIP2Q9UDT6 1046 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 PAXBP1Q9Y5B6 917 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 USP5P45974 858 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 PAIP2Q9BPZ3 127 aaKnown RBP14.3□□□□□ -0.12
EXTL3-214ENST00000523271 CCDC196A0A1B0GTZ2 297 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 PDRG1Q9NUG6 133 aa14.3□□□□□ -0.12
EXTL3-214ENST00000523271 ST20-MTHFSA0A0A6YYL1 179 aa14.29□□□□□ -0.12
EXTL3-214ENST00000523271 ATP2A1O14983 1001 aa14.29□□□□□ -0.12
EXTL3-214ENST00000523271 CCDC77Q9BR77 488 aa14.29□□□□□ -0.12
EXTL3-214ENST00000523271 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
EXTL3-214ENST00000523271 JADE2Q9NQC1 790 aa14.29□□□□□ -0.12
EXTL3-214ENST00000523271 RAPGEF2Q9Y4G8 1499 aa14.29□□□□□ -0.12
EXTL3-214ENST00000523271 MPHOSPH8Q99549 860 aa14.29□□□□□ -0.12
EXTL3-214ENST00000523271 ZSCAN29Q8IWY8 852 aaPredicted RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms