RNA–Protein interactions for RNA: ENST00000523270.1

CNOT8-223, Transcript of CCR4-NOT transcription complex subunit 8, humanhuman

TSL 4

Gene CNOT8, Length 575 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT8-223ENST00000523270 ATF5Q9Y2D1 282 aaPredicted RBP27.52■■■□□ 2
CNOT8-223ENST00000523270 UBR3Q6ZT12 1888 aa27.51■■□□□ 1.99
CNOT8-223ENST00000523270 U2AF1L5P0DN76 240 aaPredicted RBP27.51■■□□□ 1.99
CNOT8-223ENST00000523270 U2AF1Q01081 240 aaKnown RBP eCLIP27.51■■□□□ 1.99
CNOT8-223ENST00000523270 NFATC2IPQ8NCF5 419 aa27.51■■□□□ 1.99
CNOT8-223ENST00000523270 SLC4A9Q96Q91 983 aa27.51■■□□□ 1.99
CNOT8-223ENST00000523270 NUDCQ9Y266 331 aa27.51■■□□□ 1.99
CNOT8-223ENST00000523270 RNMTO43148 476 aaKnown RBP27.5■■□□□ 1.99
CNOT8-223ENST00000523270 ITPK1Q13572 414 aa27.5■■□□□ 1.99
CNOT8-223ENST00000523270 LINC00116Q8NCU8 138 aa27.5■■□□□ 1.99
CNOT8-223ENST00000523270 ZNF831Q5JPB2 1677 aa27.49■■□□□ 1.99
CNOT8-223ENST00000523270 PTGER2P43116 358 aa27.49■■□□□ 1.99
CNOT8-223ENST00000523270 COL5A3P25940 1745 aaPredicted RBP27.48■■□□□ 1.99
CNOT8-223ENST00000523270 RALBP1Q15311 655 aa27.48■■□□□ 1.99
CNOT8-223ENST00000523270 AMIGO3Q86WK7 504 aa27.48■■□□□ 1.99
CNOT8-223ENST00000523270 COL24A1Q17RW2 1714 aa27.47■■□□□ 1.99
CNOT8-223ENST00000523270 MAP3K5Q99683 1374 aa27.47■■□□□ 1.99
CNOT8-223ENST00000523270 ATP6V1AP38606 617 aa27.46■■□□□ 1.99
CNOT8-223ENST00000523270 SMIM5Q71RC9 77 aa27.46■■□□□ 1.99
CNOT8-223ENST00000523270 MTFR1LQ9H019 292 aa27.46■■□□□ 1.99
CNOT8-223ENST00000523270 SLC52A2Q9HAB3 445 aa27.46■■□□□ 1.99
CNOT8-223ENST00000523270 SIPA1L3O60292 1781 aaPredicted RBP27.45■■□□□ 1.99
CNOT8-223ENST00000523270 TJP1Q07157 1748 aa27.45■■□□□ 1.99
CNOT8-223ENST00000523270 SGIP1Q9BQI5 828 aa27.45■■□□□ 1.98
CNOT8-223ENST00000523270 RBM42Q9BTD8 480 aaKnown RBP27.45■■□□□ 1.98
CNOT8-223ENST00000523270 COL23A1Q86Y22 540 aaPredicted RBP27.44■■□□□ 1.98
CNOT8-223ENST00000523270 GAS2L2Q8NHY3 880 aa27.44■■□□□ 1.98
CNOT8-223ENST00000523270 MYH14Q7Z406 1995 aaKnown RBP27.42■■□□□ 1.98
CNOT8-223ENST00000523270 FCHSD2O94868 740 aa27.42■■□□□ 1.98
CNOT8-223ENST00000523270 CICQ96RK0 1608 aaPredicted RBP27.41■■□□□ 1.98
CNOT8-223ENST00000523270 PTCD1O75127 700 aaKnown RBP27.41■■□□□ 1.98
CNOT8-223ENST00000523270 IL17REQ8NFR9 667 aa27.41■■□□□ 1.98
CNOT8-223ENST00000523270 AK7Q96M32 723 aa27.41■■□□□ 1.98
CNOT8-223ENST00000523270 MYBBP1AQ9BQG0 1328 aaKnown RBP27.41■■□□□ 1.98
CNOT8-223ENST00000523270 UBR2Q8IWV8 1755 aa27.4■■□□□ 1.98
CNOT8-223ENST00000523270 DLG5Q8TDM6 1919 aa27.4■■□□□ 1.98
CNOT8-223ENST00000523270 GNAT3A8MTJ3 354 aa27.4■■□□□ 1.98
CNOT8-223ENST00000523270 SLC39A6Q13433 755 aa27.4■■□□□ 1.98
CNOT8-223ENST00000523270 PPP1R1BQ9UD71 204 aaPredicted RBP27.4■■□□□ 1.98
CNOT8-223ENST00000523270 KCPQ6ZWJ8 1503 aa27.4■■□□□ 1.98
CNOT8-223ENST00000523270 MSH5O43196 834 aa27.37■■□□□ 1.97
CNOT8-223ENST00000523270 PHF14O94880 888 aa27.37■■□□□ 1.97
CNOT8-223ENST00000523270 SLC16A10Q8TF71 515 aa27.37■■□□□ 1.97
CNOT8-223ENST00000523270 CEMIPQ8WUJ3 1361 aa27.36■■□□□ 1.97
CNOT8-223ENST00000523270 PRKRIP1Q9H875 184 aaPredicted RBP27.36■■□□□ 1.97
CNOT8-223ENST00000523270 GNPATO15228 680 aa27.35■■□□□ 1.97
CNOT8-223ENST00000523270 PLEKHF1Q96S99 279 aa27.35■■□□□ 1.97
CNOT8-223ENST00000523270 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.34■■□□□ 1.97
CNOT8-223ENST00000523270 ZNF316A6NFI3 1004 aaPredicted RBP27.34■■□□□ 1.97
CNOT8-223ENST00000523270 MSL1Q68DK7 614 aa27.34■■□□□ 1.97
CNOT8-223ENST00000523270 HMGB2P26583 209 aaKnown RBP27.32■■□□□ 1.96
CNOT8-223ENST00000523270 SSFA2P28290 1259 aa27.31■■□□□ 1.96
CNOT8-223ENST00000523270 MCM10Q7L590 875 aa27.31■■□□□ 1.96
CNOT8-223ENST00000523270 FLAD1Q8NFF5 587 aa27.31■■□□□ 1.96
CNOT8-223ENST00000523270 CNTNAP4Q9C0A0 1308 aa27.31■■□□□ 1.96
CNOT8-223ENST00000523270 C4AP0C0L4 1744 aa27.3■■□□□ 1.96
CNOT8-223ENST00000523270 TEFQ10587 303 aa27.3■■□□□ 1.96
CNOT8-223ENST00000523270 DCTN1Q14203 1278 aa27.3■■□□□ 1.96
CNOT8-223ENST00000523270 DNAJC10Q8IXB1 793 aa27.3■■□□□ 1.96
CNOT8-223ENST00000523270 ARXQ96QS3 562 aa27.3■■□□□ 1.96
CNOT8-223ENST00000523270 FHDC1Q9C0D6 1143 aaPredicted RBP27.29■■□□□ 1.96
CNOT8-223ENST00000523270 CRKLP46109 303 aaKnown RBP27.28■■□□□ 1.96
CNOT8-223ENST00000523270 RC3H1Q5TC82 1133 aaKnown RBP27.28■■□□□ 1.96
CNOT8-223ENST00000523270 KCNQ3O43525 872 aa27.26■■□□□ 1.95
CNOT8-223ENST00000523270 POLD1P28340 1107 aa27.25■■□□□ 1.95
CNOT8-223ENST00000523270 INTS5Q6P9B9 1019 aaKnown RBP27.24■■□□□ 1.95
CNOT8-223ENST00000523270 ZNF790Q6PG37 636 aa27.24■■□□□ 1.95
CNOT8-223ENST00000523270 ZNF496Q96IT1 587 aaPredicted RBP27.24■■□□□ 1.95
CNOT8-223ENST00000523270 RTCBQ9Y3I0 505 aaKnown RBP27.24■■□□□ 1.95
CNOT8-223ENST00000523270 RPS6KA4O75676 772 aa27.23■■□□□ 1.95
CNOT8-223ENST00000523270 NFE2L2Q16236 605 aa27.23■■□□□ 1.95
CNOT8-223ENST00000523270 RTF1Q92541 710 aaKnown RBP27.23■■□□□ 1.95
CNOT8-223ENST00000523270 SYT17Q9BSW7 474 aa27.23■■□□□ 1.95
CNOT8-223ENST00000523270 CYP19A1P11511 503 aaPredicted RBP27.22■■□□□ 1.95
CNOT8-223ENST00000523270 TTC5Q8N0Z6 440 aa27.22■■□□□ 1.95
CNOT8-223ENST00000523270 HTATSF1O43719 755 aaKnown RBP27.21■■□□□ 1.95
CNOT8-223ENST00000523270 ARHGEF1Q92888 912 aaKnown RBP27.21■■□□□ 1.95
CNOT8-223ENST00000523270 HEG1Q9ULI3 1381 aa27.21■■□□□ 1.95
CNOT8-223ENST00000523270 MAPK8IP3Q9UPT6 1336 aa27.2■■□□□ 1.95
CNOT8-223ENST00000523270 BTBD11A6QL63 1104 aa27.2■■□□□ 1.94
CNOT8-223ENST00000523270 NEFMP07197 916 aa27.2■■□□□ 1.94
CNOT8-223ENST00000523270 TRAPPC3LQ5T215 181 aa27.2■■□□□ 1.94
CNOT8-223ENST00000523270 VSIG10Q8N0Z9 540 aa27.2■■□□□ 1.94
CNOT8-223ENST00000523270 CCDC146Q8IYE0 955 aa27.19■■□□□ 1.94
CNOT8-223ENST00000523270 KLHL34Q8N239 644 aa27.19■■□□□ 1.94
CNOT8-223ENST00000523270 THUMPD2Q9BTF0 503 aaKnown RBP27.19■■□□□ 1.94
CNOT8-223ENST00000523270 CCDC87Q9NVE4 849 aa27.19■■□□□ 1.94
CNOT8-223ENST00000523270 KDM3BQ7LBC6 1761 aa27.18■■□□□ 1.94
CNOT8-223ENST00000523270 ADRA2BP18089 450 aa27.17■■□□□ 1.94
CNOT8-223ENST00000523270 PNNQ9H307 717 aaKnown RBP27.17■■□□□ 1.94
CNOT8-223ENST00000523270 ZBTB1Q9Y2K1 713 aa27.17■■□□□ 1.94
CNOT8-223ENST00000523270 CCDC184Q52MB2 194 aa27.16■■□□□ 1.94
CNOT8-223ENST00000523270 SRP68Q9UHB9 627 aaKnown RBP27.16■■□□□ 1.94
CNOT8-223ENST00000523270 ADAMTS8Q9UP79 889 aa27.16■■□□□ 1.94
CNOT8-223ENST00000523270 SOS1Q07889 1333 aaPredicted RBP27.16■■□□□ 1.94
CNOT8-223ENST00000523270 WDR43Q15061 677 aaKnown RBP eCLIP27.15■■□□□ 1.94
CNOT8-223ENST00000523270 MIS18AQ9NYP9 233 aa27.15■■□□□ 1.94
CNOT8-223ENST00000523270 NLGN2Q8NFZ4 835 aa27.14■■□□□ 1.94
CNOT8-223ENST00000523270 FMNL2Q96PY5 1086 aa27.14■■□□□ 1.94
CNOT8-223ENST00000523270 PRAMEF22A3QJZ6 481 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms