RNA–Protein interactions for RNA: ENST00000523139.5

BRD9-219, Transcript of bromodomain containing 9, humanhuman

TSL 3

Gene BRD9, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-219ENST00000523139 TOGARAM1Q9Y4F4 1720 aa8.23□□□□□ -1.09
BRD9-219ENST00000523139 UBR2Q8IWV8 1755 aa8.23□□□□□ -1.09
BRD9-219ENST00000523139 TAF7Q15545 349 aaPredicted RBP8.23□□□□□ -1.09
BRD9-219ENST00000523139 DUSP27Q5VZP5 1158 aa8.23□□□□□ -1.09
BRD9-219ENST00000523139 ILDR1Q86SU0 546 aaPredicted RBP8.23□□□□□ -1.09
BRD9-219ENST00000523139 SLC52A2Q9HAB3 445 aa8.23□□□□□ -1.09
BRD9-219ENST00000523139 RGS17Q9UGC6 210 aaPredicted RBP8.23□□□□□ -1.09
BRD9-219ENST00000523139 ITGB4P16144 1822 aa8.23□□□□□ -1.09
BRD9-219ENST00000523139 HEG1Q9ULI3 1381 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 SBF2Q86WG5 1849 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 NHSQ6T4R5 1651 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 HOXB7P09629 217 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 RXRBP28702 533 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 NEUROD2Q15784 382 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 FAM98CQ17RN3 349 aaKnown RBP8.22□□□□□ -1.09
BRD9-219ENST00000523139 FOXD4L1Q9NU39 408 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 USP35Q9P2H5 1018 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 RRP7AQ9Y3A4 280 aaKnown RBP8.22□□□□□ -1.09
BRD9-219ENST00000523139 CCDC9Q9Y3X0 531 aaKnown RBP8.22□□□□□ -1.09
BRD9-219ENST00000523139 CACNA1FO60840 1977 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 BRWD3Q6RI45 1802 aa8.22□□□□□ -1.09
BRD9-219ENST00000523139 DOT1LQ8TEK3 1739 aa8.21□□□□□ -1.09
BRD9-219ENST00000523139 HMGB2P26583 209 aaKnown RBP8.21□□□□□ -1.1
BRD9-219ENST00000523139 TEFQ10587 303 aa8.21□□□□□ -1.1
BRD9-219ENST00000523139 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
BRD9-219ENST00000523139 MARCH10Q8NA82 808 aaPredicted RBP8.21□□□□□ -1.1
BRD9-219ENST00000523139 LGR6Q9HBX8 967 aa8.21□□□□□ -1.1
BRD9-219ENST00000523139 CENPBP07199 599 aaPredicted RBP8.2□□□□□ -1.1
BRD9-219ENST00000523139 BRPF1P55201 1214 aaPredicted RBP8.2□□□□□ -1.1
BRD9-219ENST00000523139 MPRIPQ6WCQ1 1025 aa8.2□□□□□ -1.1
BRD9-219ENST00000523139 MCM10Q7L590 875 aa8.2□□□□□ -1.1
BRD9-219ENST00000523139 FANCIQ9NVI1 1328 aa8.2□□□□□ -1.1
BRD9-219ENST00000523139 RGPD3A6NKT7 1758 aaPredicted RBP8.2□□□□□ -1.1
BRD9-219ENST00000523139 RGPD4Q7Z3J3 1758 aa8.2□□□□□ -1.1
BRD9-219ENST00000523139 ZNF790Q6PG37 636 aa8.19□□□□□ -1.1
BRD9-219ENST00000523139 FAM196AQ6ZSG2 479 aa8.19□□□□□ -1.1
BRD9-219ENST00000523139 VSIG10Q8N0Z9 540 aa8.19□□□□□ -1.1
BRD9-219ENST00000523139 DDX54Q8TDD1 881 aaKnown RBP8.19□□□□□ -1.1
BRD9-219ENST00000523139 SPINK5Q9NQ38 1064 aaPredicted RBP8.19□□□□□ -1.1
BRD9-219ENST00000523139 MBIPQ9NS73 344 aa8.19□□□□□ -1.1
BRD9-219ENST00000523139 LAMB4A4D0S4 1761 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 BTBD11A6QL63 1104 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 CABP4P57796 275 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 DCTN1Q14203 1278 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 POTEAQ6S8J7 498 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 KRT27Q7Z3Y8 459 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 NFATC2IPQ8NCF5 419 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 CDCA7LQ96GN5 454 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 YTHDC1Q96MU7 727 aaKnown RBP8.18□□□□□ -1.1
BRD9-219ENST00000523139 RGS12O14924 1447 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 KCPQ6ZWJ8 1503 aa8.18□□□□□ -1.1
BRD9-219ENST00000523139 LY75O60449 1722 aa8.17□□□□□ -1.1
BRD9-219ENST00000523139 EIF4A1P60842 406 aaKnown RBP8.17□□□□□ -1.1
BRD9-219ENST00000523139 ALDH1L2Q3SY69 923 aa8.17□□□□□ -1.1
BRD9-219ENST00000523139 SMARCC1Q92922 1105 aaPredicted RBP8.17□□□□□ -1.1
BRD9-219ENST00000523139 THUMPD2Q9BTF0 503 aaKnown RBP8.17□□□□□ -1.1
BRD9-219ENST00000523139 TEX13AQ9BXU3 409 aaPredicted RBP8.17□□□□□ -1.1
BRD9-219ENST00000523139 TMOD3Q9NYL9 352 aa8.17□□□□□ -1.1
BRD9-219ENST00000523139 TSPYL4Q9UJ04 414 aa8.17□□□□□ -1.1
BRD9-219ENST00000523139 SALL2Q9Y467 1007 aaPredicted RBP8.17□□□□□ -1.1
BRD9-219ENST00000523139 BTAF1O14981 1849 aa8.16□□□□□ -1.1
BRD9-219ENST00000523139 VAMP4O75379 141 aa8.16□□□□□ -1.1
BRD9-219ENST00000523139 ERBB4Q15303 1308 aa8.16□□□□□ -1.1
BRD9-219ENST00000523139 RNF123Q5XPI4 1314 aa8.16□□□□□ -1.1
BRD9-219ENST00000523139 PIGBQ92521 554 aa8.16□□□□□ -1.1
BRD9-219ENST00000523139 BCL11BQ9C0K0 894 aaPredicted RBP8.16□□□□□ -1.1
BRD9-219ENST00000523139 U3KPZ7 1027 aaPredicted RBP8.16□□□□□ -1.1
BRD9-219ENST00000523139 RREB1Q92766 1687 aa8.15□□□□□ -1.1
BRD9-219ENST00000523139 GIGYF1O75420 1035 aaPredicted RBP8.15□□□□□ -1.1
BRD9-219ENST00000523139 EXOSC9Q06265 439 aaKnown RBP8.15□□□□□ -1.1
BRD9-219ENST00000523139 TTC5Q8N0Z6 440 aa8.15□□□□□ -1.1
BRD9-219ENST00000523139 FMNL2Q96PY5 1086 aa8.15□□□□□ -1.1
BRD9-219ENST00000523139 C5P01031 1676 aa8.14□□□□□ -1.11
BRD9-219ENST00000523139 IBTKQ9P2D0 1353 aaPredicted RBP8.14□□□□□ -1.11
BRD9-219ENST00000523139 PLSCR1O15162 318 aa8.14□□□□□ -1.11
BRD9-219ENST00000523139 SNRPA1P09661 255 aaKnown RBP8.14□□□□□ -1.11
BRD9-219ENST00000523139 PRIM1P49642 420 aaKnown RBP8.14□□□□□ -1.11
BRD9-219ENST00000523139 TWISTNBQ3B726 338 aaPredicted RBP8.14□□□□□ -1.11
BRD9-219ENST00000523139 ARHGAP45Q92619 1136 aa8.14□□□□□ -1.11
BRD9-219ENST00000523139 TSR2Q969E8 191 aaKnown RBP8.14□□□□□ -1.11
BRD9-219ENST00000523139 RNF39Q9H2S5 420 aa8.14□□□□□ -1.11
BRD9-219ENST00000523139 ATG3Q9NT62 314 aa8.14□□□□□ -1.11
BRD9-219ENST00000523139 COL5A3P25940 1745 aaPredicted RBP8.14□□□□□ -1.11
BRD9-219ENST00000523139 TNS1Q9HBL0 1735 aaKnown RBP8.14□□□□□ -1.11
BRD9-219ENST00000523139 KAT6BQ8WYB5 2073 aa8.14□□□□□ -1.11
BRD9-219ENST00000523139 TJP1Q07157 1748 aa8.13□□□□□ -1.11
BRD9-219ENST00000523139 RGL2O15211 777 aa8.13□□□□□ -1.11
BRD9-219ENST00000523139 RARSP54136 660 aaKnown RBP8.13□□□□□ -1.11
BRD9-219ENST00000523139 CCDC125Q86Z20 511 aa8.13□□□□□ -1.11
BRD9-219ENST00000523139 C8orf58Q8NAV2 365 aa8.13□□□□□ -1.11
BRD9-219ENST00000523139 ZNF496Q96IT1 587 aaPredicted RBP8.13□□□□□ -1.11
BRD9-219ENST00000523139 RTN4Q9NQC3 1192 aaKnown RBP8.13□□□□□ -1.11
BRD9-219ENST00000523139 RCAN3Q9UKA8 241 aa8.13□□□□□ -1.11
BRD9-219ENST00000523139 KIF16BQ96L93 1317 aa8.12□□□□□ -1.11
BRD9-219ENST00000523139 A0A0G2JS52 829 aa8.12□□□□□ -1.11
BRD9-219ENST00000523139 CCDC30Q5VVM6 783 aa8.12□□□□□ -1.11
BRD9-219ENST00000523139 LAS1LQ9Y4W2 734 aaKnown RBP8.12□□□□□ -1.11
BRD9-219ENST00000523139 TAF1LQ8IZX4 1826 aa8.12□□□□□ -1.11
BRD9-219ENST00000523139 PALLDQ8WX93 1383 aa8.11□□□□□ -1.11
BRD9-219ENST00000523139 PTPRCP08575 1304 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms