RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 DCAF5Q96JK2 942 aa14.06□□□□□ -0.16
DENND3-220ENST00000523066 PDGFDQ9GZP0 370 aaPredicted RBP14.06□□□□□ -0.16
DENND3-220ENST00000523066 TMOD3Q9NYL9 352 aa14.06□□□□□ -0.16
DENND3-220ENST00000523066 ASAP1Q9ULH1 1129 aa14.06□□□□□ -0.16
DENND3-220ENST00000523066 PALLDQ8WX93 1383 aa14.06□□□□□ -0.16
DENND3-220ENST00000523066 ZNF827Q17R98 1081 aa14.05□□□□□ -0.16
DENND3-220ENST00000523066 AKAP4Q5JQC9 854 aa14.05□□□□□ -0.16
DENND3-220ENST00000523066 DLG5Q8TDM6 1919 aa14.05□□□□□ -0.16
DENND3-220ENST00000523066 C5P01031 1676 aa14.04□□□□□ -0.16
DENND3-220ENST00000523066 ADAMTS7Q9UKP4 1686 aa14.04□□□□□ -0.16
DENND3-220ENST00000523066 HSP90AB1P08238 724 aaKnown RBP14.04□□□□□ -0.16
DENND3-220ENST00000523066 ATG3Q9NT62 314 aa14.04□□□□□ -0.16
DENND3-220ENST00000523066 CCNL1Q9UK58 526 aaPredicted RBP14.04□□□□□ -0.16
DENND3-220ENST00000523066 CASZ1Q86V15 1759 aa14.04□□□□□ -0.16
DENND3-220ENST00000523066 ERVV-2B6SEH9 535 aa14.03□□□□□ -0.16
DENND3-220ENST00000523066 RNMTO43148 476 aaKnown RBP14.03□□□□□ -0.16
DENND3-220ENST00000523066 CABP4P57796 275 aa14.03□□□□□ -0.16
DENND3-220ENST00000523066 SLC15A2Q16348 729 aa14.03□□□□□ -0.16
DENND3-220ENST00000523066 NFATC2IPQ8NCF5 419 aa14.03□□□□□ -0.16
DENND3-220ENST00000523066 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
DENND3-220ENST00000523066 FCHSD2O94868 740 aa14.02□□□□□ -0.17
DENND3-220ENST00000523066 SLC27A3Q5K4L6 730 aa14.02□□□□□ -0.17
DENND3-220ENST00000523066 STK32BQ9NY57 414 aa14.02□□□□□ -0.17
DENND3-220ENST00000523066 CCDC184Q52MB2 194 aa14.01□□□□□ -0.17
DENND3-220ENST00000523066 IL17REQ8NFR9 667 aa14.01□□□□□ -0.17
DENND3-220ENST00000523066 AKT1S1Q96B36 256 aa14.01□□□□□ -0.17
DENND3-220ENST00000523066 SIPA1L3O60292 1781 aaPredicted RBP14.01□□□□□ -0.17
DENND3-220ENST00000523066 MRC1P22897 1456 aa14□□□□□ -0.17
DENND3-220ENST00000523066 MAP3K5Q99683 1374 aa14□□□□□ -0.17
DENND3-220ENST00000523066 SMIM5Q71RC9 77 aa14□□□□□ -0.17
DENND3-220ENST00000523066 GAS2L2Q8NHY3 880 aa14□□□□□ -0.17
DENND3-220ENST00000523066 SMARCC1Q92922 1105 aaPredicted RBP14□□□□□ -0.17
DENND3-220ENST00000523066 SLC4A9Q96Q91 983 aa14□□□□□ -0.17
DENND3-220ENST00000523066 PLEKHF1Q96S99 279 aa14□□□□□ -0.17
DENND3-220ENST00000523066 C4BP0C0L5 1744 aa13.99□□□□□ -0.17
DENND3-220ENST00000523066 QSER1Q2KHR3 1735 aa13.99□□□□□ -0.17
DENND3-220ENST00000523066 LOC102724428A0A0B4J2F2 783 aa13.99□□□□□ -0.17
DENND3-220ENST00000523066 GNAT3A8MTJ3 354 aa13.99□□□□□ -0.17
DENND3-220ENST00000523066 SIK1P57059 783 aa13.99□□□□□ -0.17
DENND3-220ENST00000523066 C1QBPQ07021 282 aaKnown RBP13.99□□□□□ -0.17
DENND3-220ENST00000523066 SLC39A6Q13433 755 aa13.99□□□□□ -0.17
DENND3-220ENST00000523066 ITPK1Q13572 414 aa13.99□□□□□ -0.17
DENND3-220ENST00000523066 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
DENND3-220ENST00000523066 SLC52A2Q9HAB3 445 aa13.99□□□□□ -0.17
DENND3-220ENST00000523066 DCTN1Q14203 1278 aa13.98□□□□□ -0.17
DENND3-220ENST00000523066 LINC00116Q8NCU8 138 aa13.98□□□□□ -0.17
DENND3-220ENST00000523066 LRP5O75197 1615 aa13.97□□□□□ -0.17
DENND3-220ENST00000523066 UBR3Q6ZT12 1888 aa13.97□□□□□ -0.17
DENND3-220ENST00000523066 PTCD1O75127 700 aaKnown RBP13.97□□□□□ -0.17
DENND3-220ENST00000523066 ATP6V1AP38606 617 aa13.97□□□□□ -0.17
DENND3-220ENST00000523066 MCM10Q7L590 875 aa13.97□□□□□ -0.17
DENND3-220ENST00000523066 AMIGO3Q86WK7 504 aa13.97□□□□□ -0.17
DENND3-220ENST00000523066 CCDC146Q8IYE0 955 aa13.97□□□□□ -0.17
DENND3-220ENST00000523066 COL5A3P25940 1745 aaPredicted RBP13.97□□□□□ -0.17
DENND3-220ENST00000523066 TJP1Q07157 1748 aa13.97□□□□□ -0.17
DENND3-220ENST00000523066 PNPLA7Q6ZV29 1317 aa13.96□□□□□ -0.17
DENND3-220ENST00000523066 CAPN15O75808 1086 aa13.96□□□□□ -0.17
DENND3-220ENST00000523066 ZBTB7AO95365 584 aa13.96□□□□□ -0.17
DENND3-220ENST00000523066 MYH14Q7Z406 1995 aaKnown RBP13.96□□□□□ -0.18
DENND3-220ENST00000523066 UBR2Q8IWV8 1755 aa13.96□□□□□ -0.18
DENND3-220ENST00000523066 TFCP2L1Q9NZI6 479 aa13.95□□□□□ -0.18
DENND3-220ENST00000523066 ADAMTS8Q9UP79 889 aa13.95□□□□□ -0.18
DENND3-220ENST00000523066 CEMIPQ8WUJ3 1361 aa13.95□□□□□ -0.18
DENND3-220ENST00000523066 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
DENND3-220ENST00000523066 ZNF831Q5JPB2 1677 aa13.95□□□□□ -0.18
DENND3-220ENST00000523066 THUMPD2Q9BTF0 503 aaKnown RBP13.94□□□□□ -0.18
DENND3-220ENST00000523066 ANP32CO43423 234 aa13.93□□□□□ -0.18
DENND3-220ENST00000523066 KCNQ3O43525 872 aa13.93□□□□□ -0.18
DENND3-220ENST00000523066 TEFQ10587 303 aa13.93□□□□□ -0.18
DENND3-220ENST00000523066 WDR43Q15061 677 aaKnown RBP eCLIP13.93□□□□□ -0.18
DENND3-220ENST00000523066 NFE2L2Q16236 605 aa13.93□□□□□ -0.18
DENND3-220ENST00000523066 COL23A1Q86Y22 540 aaPredicted RBP13.93□□□□□ -0.18
DENND3-220ENST00000523066 RRP7AQ9Y3A4 280 aaKnown RBP13.93□□□□□ -0.18
DENND3-220ENST00000523066 MAPK8IP3Q9UPT6 1336 aa13.92□□□□□ -0.18
DENND3-220ENST00000523066 PHF14O94880 888 aa13.92□□□□□ -0.18
DENND3-220ENST00000523066 NEFMP07197 916 aa13.92□□□□□ -0.18
DENND3-220ENST00000523066 RTF1Q92541 710 aaKnown RBP13.92□□□□□ -0.18
DENND3-220ENST00000523066 AK7Q96M32 723 aa13.92□□□□□ -0.18
DENND3-220ENST00000523066 CICQ96RK0 1608 aaPredicted RBP13.91□□□□□ -0.18
DENND3-220ENST00000523066 DNAJC10Q8IXB1 793 aa13.91□□□□□ -0.18
DENND3-220ENST00000523066 SENP3-EIF4A1A0A087X0R7 540 aa13.9□□□□□ -0.18
DENND3-220ENST00000523066 GNPATO15228 680 aa13.9□□□□□ -0.18
DENND3-220ENST00000523066 TMPOP42166 694 aaKnown RBP13.9□□□□□ -0.18
DENND3-220ENST00000523066 PTGER2P43116 358 aa13.9□□□□□ -0.18
DENND3-220ENST00000523066 PNNQ9H307 717 aaKnown RBP13.9□□□□□ -0.18
DENND3-220ENST00000523066 SPON1Q9HCB6 807 aa13.9□□□□□ -0.18
DENND3-220ENST00000523066 MIS18AQ9NYP9 233 aa13.9□□□□□ -0.18
DENND3-220ENST00000523066 COL24A1Q17RW2 1714 aa13.9□□□□□ -0.18
DENND3-220ENST00000523066 BTBD11A6QL63 1104 aa13.89□□□□□ -0.19
DENND3-220ENST00000523066 RIPK4P57078 832 aa13.89□□□□□ -0.19
DENND3-220ENST00000523066 NEUROD2Q15784 382 aa13.89□□□□□ -0.19
DENND3-220ENST00000523066 ZNF790Q6PG37 636 aa13.89□□□□□ -0.19
DENND3-220ENST00000523066 ZNF496Q96IT1 587 aaPredicted RBP13.89□□□□□ -0.19
DENND3-220ENST00000523066 C4AP0C0L4 1744 aa13.88□□□□□ -0.19
DENND3-220ENST00000523066 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.88□□□□□ -0.19
DENND3-220ENST00000523066 HTATSF1O43719 755 aaKnown RBP13.88□□□□□ -0.19
DENND3-220ENST00000523066 CRKLP46109 303 aaKnown RBP13.88□□□□□ -0.19
DENND3-220ENST00000523066 MSL1Q68DK7 614 aa13.88□□□□□ -0.19
DENND3-220ENST00000523066 RUNDC1Q96C34 613 aa13.88□□□□□ -0.19
DENND3-220ENST00000523066 MTFR1LQ9H019 292 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms