RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
CSMD1-211ENST00000523062 PRAM1Q96QH2 718 aa9.21□□□□□ -0.94
CSMD1-211ENST00000523062 SLC6A16Q9GZN6 736 aa9.21□□□□□ -0.94
CSMD1-211ENST00000523062 PLEKHG1Q9ULL1 1385 aa9.21□□□□□ -0.94
CSMD1-211ENST00000523062 NSD3Q9BZ95 1437 aa9.21□□□□□ -0.94
CSMD1-211ENST00000523062 KNDC1Q76NI1 1749 aa9.2□□□□□ -0.94
CSMD1-211ENST00000523062 E2F4Q16254 413 aa9.2□□□□□ -0.94
CSMD1-211ENST00000523062 ANKRD36BQ8N2N9 1353 aa9.2□□□□□ -0.94
CSMD1-211ENST00000523062 TECPR2O15040 1411 aa9.2□□□□□ -0.94
CSMD1-211ENST00000523062 ARHGAP23Q9P227 1491 aa9.2□□□□□ -0.94
CSMD1-211ENST00000523062 SLIT1O75093 1534 aa9.2□□□□□ -0.94
CSMD1-211ENST00000523062 NR1I2O75469 434 aa9.19□□□□□ -0.94
CSMD1-211ENST00000523062 PPP2R1AP30153 589 aa9.19□□□□□ -0.94
CSMD1-211ENST00000523062 CEBPAP49715 358 aaPredicted RBP9.19□□□□□ -0.94
CSMD1-211ENST00000523062 SAFB2Q14151 953 aaKnown RBP eCLIP9.19□□□□□ -0.94
CSMD1-211ENST00000523062 TOR4AQ9NXH8 423 aa9.19□□□□□ -0.94
CSMD1-211ENST00000523062 FAM135BQ49AJ0 1406 aa9.19□□□□□ -0.94
CSMD1-211ENST00000523062 CPS1P31327 1500 aa9.19□□□□□ -0.94
CSMD1-211ENST00000523062 NSD2O96028 1365 aa9.18□□□□□ -0.94
CSMD1-211ENST00000523062 METP08581 1390 aa9.18□□□□□ -0.94
CSMD1-211ENST00000523062 SRPK2P78362 688 aaKnown RBP9.18□□□□□ -0.94
CSMD1-211ENST00000523062 CGNL1Q0VF96 1302 aa9.18□□□□□ -0.94
CSMD1-211ENST00000523062 CYP4X1Q8N118 509 aa9.18□□□□□ -0.94
CSMD1-211ENST00000523062 MINK1Q8N4C8 1332 aaPredicted RBP9.18□□□□□ -0.94
CSMD1-211ENST00000523062 SIRT1Q96EB6 747 aa9.18□□□□□ -0.94
CSMD1-211ENST00000523062 CARD14Q9BXL6 1004 aa9.18□□□□□ -0.94
CSMD1-211ENST00000523062 SLC12A5Q9H2X9 1139 aa9.18□□□□□ -0.94
CSMD1-211ENST00000523062 EID1Q9Y6B2 187 aa9.18□□□□□ -0.94
CSMD1-211ENST00000523062 RIMS1Q86UR5 1692 aaKnown RBP9.17□□□□□ -0.94
CSMD1-211ENST00000523062 BLMP54132 1417 aaPredicted RBP9.17□□□□□ -0.94
CSMD1-211ENST00000523062 ADAMTS13Q76LX8 1427 aa9.17□□□□□ -0.94
CSMD1-211ENST00000523062 TERTO14746 1132 aaKnown RBP9.17□□□□□ -0.94
CSMD1-211ENST00000523062 NEFLP07196 543 aa9.17□□□□□ -0.94
CSMD1-211ENST00000523062 RPIAP49247 311 aa9.17□□□□□ -0.94
CSMD1-211ENST00000523062 BCANQ96GW7 911 aa9.17□□□□□ -0.94
CSMD1-211ENST00000523062 DIP2AQ14689 1571 aa9.16□□□□□ -0.94
CSMD1-211ENST00000523062 CD2BP2O95400 341 aaKnown RBP9.16□□□□□ -0.94
CSMD1-211ENST00000523062 THEMISQ8N1K5 641 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-211ENST00000523062 ADAMTSL3P82987 1691 aa9.16□□□□□ -0.94
CSMD1-211ENST00000523062 CEP170BQ9Y4F5 1589 aaPredicted RBP9.16□□□□□ -0.94
CSMD1-211ENST00000523062 MED14O60244 1454 aa9.15□□□□□ -0.94
CSMD1-211ENST00000523062 PLEKHH1Q9ULM0 1364 aa9.15□□□□□ -0.94
CSMD1-211ENST00000523062 DNAJB2P25686 324 aa9.15□□□□□ -0.94
CSMD1-211ENST00000523062 TXNDC2Q86VQ3 553 aa9.15□□□□□ -0.94
CSMD1-211ENST00000523062 CDK19Q9BWU1 502 aa9.15□□□□□ -0.94
CSMD1-211ENST00000523062 TERF2IPQ9NYB0 399 aa9.15□□□□□ -0.94
CSMD1-211ENST00000523062 SMG6Q86US8 1419 aaKnown RBP9.14□□□□□ -0.95
CSMD1-211ENST00000523062 A0A1W2PP64 1363 aa9.14□□□□□ -0.95
CSMD1-211ENST00000523062 LTKP29376 864 aa9.14□□□□□ -0.95
CSMD1-211ENST00000523062 WDR43Q15061 677 aaKnown RBP eCLIP9.14□□□□□ -0.95
CSMD1-211ENST00000523062 TMEM134Q9H6X4 195 aa9.14□□□□□ -0.95
CSMD1-211ENST00000523062 ATP7BP35670 1465 aa9.14□□□□□ -0.95
CSMD1-211ENST00000523062 ZNF142P52746 1687 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-211ENST00000523062 ADGRB2O60241 1585 aa9.13□□□□□ -0.95
CSMD1-211ENST00000523062 LCE2CQ5TA81 110 aa9.13□□□□□ -0.95
CSMD1-211ENST00000523062 HDGFL2Q7Z4V5 671 aaPredicted RBP9.13□□□□□ -0.95
CSMD1-211ENST00000523062 WAPLQ7Z5K2 1190 aa9.13□□□□□ -0.95
CSMD1-211ENST00000523062 MORC1Q86VD1 984 aa9.13□□□□□ -0.95
CSMD1-211ENST00000523062 SUPT16HQ9Y5B9 1047 aaKnown RBP9.13□□□□□ -0.95
CSMD1-211ENST00000523062 PTCH1Q13635 1447 aa9.13□□□□□ -0.95
CSMD1-211ENST00000523062 WASLO00401 505 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-211ENST00000523062 SENP2Q9HC62 589 aa9.12□□□□□ -0.95
CSMD1-211ENST00000523062 NUDCQ9Y266 331 aa9.12□□□□□ -0.95
CSMD1-211ENST00000523062 TBX22Q9Y458 520 aa9.12□□□□□ -0.95
CSMD1-211ENST00000523062 CD163L1Q9NR16 1453 aa9.12□□□□□ -0.95
CSMD1-211ENST00000523062 POLR3AO14802 1390 aaPredicted RBP9.12□□□□□ -0.95
CSMD1-211ENST00000523062 ROBO2Q9HCK4 1378 aa9.12□□□□□ -0.95
CSMD1-211ENST00000523062 CFHP08603 1231 aa9.11□□□□□ -0.95
CSMD1-211ENST00000523062 SLC10A3P09131 477 aa9.1□□□□□ -0.95
CSMD1-211ENST00000523062 PDE3BQ13370 1112 aa9.1□□□□□ -0.95
CSMD1-211ENST00000523062 SCUBE3Q8IX30 993 aa9.1□□□□□ -0.95
CSMD1-211ENST00000523062 PTPRUQ92729 1446 aa9.1□□□□□ -0.95
CSMD1-211ENST00000523062 ANKRD26Q9UPS8 1709 aa9.1□□□□□ -0.95
CSMD1-211ENST00000523062 PIK3R4Q99570 1358 aa9.1□□□□□ -0.95
CSMD1-211ENST00000523062 CDC42BPGQ6DT37 1551 aa9.09□□□□□ -0.95
CSMD1-211ENST00000523062 PPIP5K1Q6PFW1 1433 aa9.09□□□□□ -0.95
CSMD1-211ENST00000523062 SNRPBP14678 240 aaKnown RBP9.09□□□□□ -0.95
CSMD1-211ENST00000523062 RBM46Q8TBY0 533 aaKnown RBP9.09□□□□□ -0.95
CSMD1-211ENST00000523062 CFAP53Q96M91 514 aa9.09□□□□□ -0.95
CSMD1-211ENST00000523062 ATP13A2Q9NQ11 1180 aa9.09□□□□□ -0.95
CSMD1-211ENST00000523062 CABP1Q9NZU7 370 aa9.09□□□□□ -0.95
CSMD1-211ENST00000523062 ADAMTS8Q9UP79 889 aa9.09□□□□□ -0.95
CSMD1-211ENST00000523062 XRN1Q8IZH2 1706 aaKnown RBP9.08□□□□□ -0.96
CSMD1-211ENST00000523062 EDC4Q6P2E9 1401 aaKnown RBP9.08□□□□□ -0.96
CSMD1-211ENST00000523062 TTC24A2A3L6 582 aaPredicted RBP9.08□□□□□ -0.96
CSMD1-211ENST00000523062 TRIM47Q96LD4 638 aa9.08□□□□□ -0.96
CSMD1-211ENST00000523062 SLC26A8Q96RN1 970 aa9.08□□□□□ -0.96
CSMD1-211ENST00000523062 SPSB2Q99619 263 aa9.08□□□□□ -0.96
CSMD1-211ENST00000523062 KIF20BQ96Q89 1820 aa9.08□□□□□ -0.96
CSMD1-211ENST00000523062 CPSF1Q10570 1443 aaKnown RBP9.07□□□□□ -0.96
CSMD1-211ENST00000523062 SETD1BQ9UPS6 1966 aaKnown RBP9.07□□□□□ -0.96
CSMD1-211ENST00000523062 ANKLE2Q86XL3 938 aa9.07□□□□□ -0.96
CSMD1-211ENST00000523062 SLC16A10Q8TF71 515 aa9.07□□□□□ -0.96
CSMD1-211ENST00000523062 NUDT16Q96DE0 195 aaKnown RBP9.07□□□□□ -0.96
CSMD1-211ENST00000523062 AMOTL2Q9Y2J4 779 aa9.07□□□□□ -0.96
CSMD1-211ENST00000523062 ADGRG1Q9Y653 693 aa9.07□□□□□ -0.96
CSMD1-211ENST00000523062 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-211ENST00000523062 RCCD1A6NED2 376 aa9.06□□□□□ -0.96
CSMD1-211ENST00000523062 FYB1O15117 783 aa9.06□□□□□ -0.96
CSMD1-211ENST00000523062 TNNT2P45379 298 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms