RNA–Protein interactions for RNA: ENST00000523004.1

GM2A-202, Transcript of GM2 ganglioside activator, humanhuman

TSL 1 (best)

Gene GM2A, Length 643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GM2A-202ENST00000523004 ATG3Q9NT62 314 aa10.86□□□□□ -0.67
GM2A-202ENST00000523004 IGSF1Q8N6C5 1336 aa10.85□□□□□ -0.67
GM2A-202ENST00000523004 ERVV-2B6SEH9 535 aa10.85□□□□□ -0.67
GM2A-202ENST00000523004 GNPATO15228 680 aa10.85□□□□□ -0.67
GM2A-202ENST00000523004 POLR3GLQ9BT43 218 aa10.85□□□□□ -0.67
GM2A-202ENST00000523004 EIF4G2P78344 907 aaKnown RBP eCLIP10.84□□□□□ -0.67
GM2A-202ENST00000523004 PANK3Q9H999 370 aa10.84□□□□□ -0.67
GM2A-202ENST00000523004 ADCY9O60503 1353 aa10.84□□□□□ -0.67
GM2A-202ENST00000523004 KDRP35968 1356 aa10.84□□□□□ -0.67
GM2A-202ENST00000523004 ZNF831Q5JPB2 1677 aa10.84□□□□□ -0.67
GM2A-202ENST00000523004 ATP10DQ9P241 1426 aa10.84□□□□□ -0.67
GM2A-202ENST00000523004 HSP90AB1P08238 724 aaKnown RBP10.83□□□□□ -0.68
GM2A-202ENST00000523004 HSPA5P11021 654 aaKnown RBP10.83□□□□□ -0.68
GM2A-202ENST00000523004 DCAF5Q96JK2 942 aa10.83□□□□□ -0.68
GM2A-202ENST00000523004 SLC4A9Q96Q91 983 aa10.83□□□□□ -0.68
GM2A-202ENST00000523004 KIF13BQ9NQT8 1826 aa10.82□□□□□ -0.68
GM2A-202ENST00000523004 PLEKHO1Q53GL0 409 aaPredicted RBP10.82□□□□□ -0.68
GM2A-202ENST00000523004 RC3H1Q5TC82 1133 aaKnown RBP10.82□□□□□ -0.68
GM2A-202ENST00000523004 MYH14Q7Z406 1995 aaKnown RBP10.82□□□□□ -0.68
GM2A-202ENST00000523004 COL5A3P25940 1745 aaPredicted RBP10.81□□□□□ -0.68
GM2A-202ENST00000523004 MMP10P09238 476 aa10.81□□□□□ -0.68
GM2A-202ENST00000523004 AMOTQ4VCS5 1084 aa10.81□□□□□ -0.68
GM2A-202ENST00000523004 TRAPPC3LQ5T215 181 aa10.81□□□□□ -0.68
GM2A-202ENST00000523004 CCER1Q8TC90 406 aaPredicted RBP10.81□□□□□ -0.68
GM2A-202ENST00000523004 RBM42Q9BTD8 480 aaKnown RBP10.81□□□□□ -0.68
GM2A-202ENST00000523004 GPBP1L1Q9HC44 474 aaPredicted RBP10.81□□□□□ -0.68
GM2A-202ENST00000523004 RTCBQ9Y3I0 505 aaKnown RBP10.81□□□□□ -0.68
GM2A-202ENST00000523004 KDM6AO15550 1401 aaPredicted RBP10.81□□□□□ -0.68
GM2A-202ENST00000523004 CABP4P57796 275 aa10.8□□□□□ -0.68
GM2A-202ENST00000523004 ZNF530Q6P9A1 599 aaPredicted RBP10.8□□□□□ -0.68
GM2A-202ENST00000523004 NLGN1Q8N2Q7 840 aa10.8□□□□□ -0.68
GM2A-202ENST00000523004 ARHGEF1Q92888 912 aaKnown RBP10.8□□□□□ -0.68
GM2A-202ENST00000523004 WWC3Q9ULE0 1092 aa10.8□□□□□ -0.68
GM2A-202ENST00000523004 KIAA1551Q9HCM1 1747 aa10.8□□□□□ -0.68
GM2A-202ENST00000523004 CNTNAP4Q9C0A0 1308 aa10.8□□□□□ -0.68
GM2A-202ENST00000523004 RPS6KA4O75676 772 aa10.79□□□□□ -0.68
GM2A-202ENST00000523004 GYS1P13807 737 aa10.79□□□□□ -0.68
GM2A-202ENST00000523004 TGFB2P61812 414 aa10.79□□□□□ -0.68
GM2A-202ENST00000523004 MORC1Q86VD1 984 aa10.79□□□□□ -0.68
GM2A-202ENST00000523004 AEBP1Q8IUX7 1158 aa10.79□□□□□ -0.68
GM2A-202ENST00000523004 CICQ96RK0 1608 aaPredicted RBP10.79□□□□□ -0.68
GM2A-202ENST00000523004 PXDNLA1KZ92 1463 aa10.79□□□□□ -0.68
GM2A-202ENST00000523004 N4BP2Q86UW6 1770 aaPredicted RBP10.78□□□□□ -0.68
GM2A-202ENST00000523004 MTHFSP49914 203 aa10.78□□□□□ -0.68
GM2A-202ENST00000523004 C1orf141Q5JVX7 400 aa10.78□□□□□ -0.68
GM2A-202ENST00000523004 C10orf71Q711Q0 1435 aa10.77□□□□□ -0.68
GM2A-202ENST00000523004 A0A0G2JLW4 131 aa10.77□□□□□ -0.69
GM2A-202ENST00000523004 PTCD1O75127 700 aaKnown RBP10.77□□□□□ -0.69
GM2A-202ENST00000523004 IL13P35225 146 aa10.77□□□□□ -0.69
GM2A-202ENST00000523004 RFC4P35249 363 aa10.77□□□□□ -0.69
GM2A-202ENST00000523004 SULT6B1Q6IMI4 303 aa10.77□□□□□ -0.69
GM2A-202ENST00000523004 NFATC2IPQ8NCF5 419 aa10.77□□□□□ -0.69
GM2A-202ENST00000523004 ZNF526Q8TF50 670 aaPredicted RBP10.77□□□□□ -0.69
GM2A-202ENST00000523004 C4AP0C0L4 1744 aa10.77□□□□□ -0.69
GM2A-202ENST00000523004 SCN11AQ9UI33 1791 aa10.77□□□□□ -0.69
GM2A-202ENST00000523004 BRCA1P38398 1863 aaKnown RBP10.76□□□□□ -0.69
GM2A-202ENST00000523004 CRKLP46109 303 aaKnown RBP10.76□□□□□ -0.69
GM2A-202ENST00000523004 CCDC87Q9NVE4 849 aa10.76□□□□□ -0.69
GM2A-202ENST00000523004 KNSTRNQ9Y448 316 aa10.76□□□□□ -0.69
GM2A-202ENST00000523004 KIF3CO14782 793 aa10.75□□□□□ -0.69
GM2A-202ENST00000523004 HSPA6P17066 643 aa10.75□□□□□ -0.69
GM2A-202ENST00000523004 AMER1Q5JTC6 1135 aaPredicted RBP10.75□□□□□ -0.69
GM2A-202ENST00000523004 BCS1LQ9Y276 419 aa10.75□□□□□ -0.69
GM2A-202ENST00000523004 PARP3Q9Y6F1 533 aa10.75□□□□□ -0.69
GM2A-202ENST00000523004 DPEP1P16444 411 aa10.74□□□□□ -0.69
GM2A-202ENST00000523004 KCNA3P22001 575 aa10.74□□□□□ -0.69
GM2A-202ENST00000523004 AKAP4Q5JQC9 854 aa10.74□□□□□ -0.69
GM2A-202ENST00000523004 TJP1Q07157 1748 aa10.74□□□□□ -0.69
GM2A-202ENST00000523004 VIRMAQ69YN4 1812 aaKnown RBP10.73□□□□□ -0.69
GM2A-202ENST00000523004 ARFGEF1Q9Y6D6 1849 aa10.73□□□□□ -0.69
GM2A-202ENST00000523004 INTS5Q6P9B9 1019 aaKnown RBP10.73□□□□□ -0.69
GM2A-202ENST00000523004 PPP4R3CPQ6ZMV5 832 aa10.73□□□□□ -0.69
GM2A-202ENST00000523004 SRP68Q9UHB9 627 aaKnown RBP10.73□□□□□ -0.69
GM2A-202ENST00000523004 USP42Q9H9J4 1324 aaKnown RBP10.73□□□□□ -0.69
GM2A-202ENST00000523004 ADAMTS7Q9UKP4 1686 aa10.73□□□□□ -0.69
GM2A-202ENST00000523004 FCHSD2O94868 740 aa10.72□□□□□ -0.69
GM2A-202ENST00000523004 FKBP8Q14318 412 aa10.72□□□□□ -0.69
GM2A-202ENST00000523004 ARHGAP27Q6ZUM4 889 aa10.72□□□□□ -0.69
GM2A-202ENST00000523004 SLC52A2Q9HAB3 445 aa10.72□□□□□ -0.69
GM2A-202ENST00000523004 LGR6Q9HBX8 967 aa10.72□□□□□ -0.69
GM2A-202ENST00000523004 PER1O15534 1290 aaPredicted RBP10.71□□□□□ -0.69
GM2A-202ENST00000523004 MRC1P22897 1456 aa10.71□□□□□ -0.69
GM2A-202ENST00000523004 TM4SF1P30408 202 aa10.71□□□□□ -0.69
GM2A-202ENST00000523004 DDR1Q08345 913 aa10.71□□□□□ -0.69
GM2A-202ENST00000523004 PIM2Q9P1W9 311 aa10.71□□□□□ -0.69
GM2A-202ENST00000523004 KIF7Q2M1P5 1343 aa10.7□□□□□ -0.7
GM2A-202ENST00000523004 POLRMTO00411 1230 aaKnown RBP10.7□□□□□ -0.7
GM2A-202ENST00000523004 RNMTO43148 476 aaKnown RBP10.7□□□□□ -0.7
GM2A-202ENST00000523004 CYP19A1P11511 503 aaPredicted RBP10.7□□□□□ -0.7
GM2A-202ENST00000523004 DNAJC10Q8IXB1 793 aa10.7□□□□□ -0.7
GM2A-202ENST00000523004 SOS1Q07889 1333 aaPredicted RBP10.69□□□□□ -0.7
GM2A-202ENST00000523004 ZPR1O75312 459 aa10.69□□□□□ -0.7
GM2A-202ENST00000523004 TOMM70O94826 608 aa10.69□□□□□ -0.7
GM2A-202ENST00000523004 HMOX1P09601 288 aa10.69□□□□□ -0.7
GM2A-202ENST00000523004 SLC39A6Q13433 755 aa10.69□□□□□ -0.7
GM2A-202ENST00000523004 MTHFSDQ2M296 383 aaKnown RBP10.69□□□□□ -0.7
GM2A-202ENST00000523004 DALRD3Q5D0E6 543 aaKnown RBP10.69□□□□□ -0.7
GM2A-202ENST00000523004 SBF1O95248 1867 aa10.69□□□□□ -0.7
GM2A-202ENST00000523004 KCPQ6ZWJ8 1503 aa10.68□□□□□ -0.7
GM2A-202ENST00000523004 AFDNP55196 1824 aaKnown RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms