RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 LRRC4BQ9NT99 713 aa9.08□□□□□ -0.96
SPIDR-218ENST00000522222 ADAMTS7Q9UKP4 1686 aa9.07□□□□□ -0.96
SPIDR-218ENST00000522222 SCN11AQ9UI33 1791 aa9.07□□□□□ -0.96
SPIDR-218ENST00000522222 HSP90AB1P08238 724 aaKnown RBP9.07□□□□□ -0.96
SPIDR-218ENST00000522222 KCNQ4P56696 695 aa9.07□□□□□ -0.96
SPIDR-218ENST00000522222 ZNF827Q17R98 1081 aa9.07□□□□□ -0.96
SPIDR-218ENST00000522222 C1orf141Q5JVX7 400 aa9.07□□□□□ -0.96
SPIDR-218ENST00000522222 SLC27A3Q5K4L6 730 aa9.07□□□□□ -0.96
SPIDR-218ENST00000522222 PIGBQ92521 554 aa9.07□□□□□ -0.96
SPIDR-218ENST00000522222 STK32BQ9NY57 414 aa9.07□□□□□ -0.96
SPIDR-218ENST00000522222 TMOD3Q9NYL9 352 aa9.07□□□□□ -0.96
SPIDR-218ENST00000522222 QSER1Q2KHR3 1735 aa9.06□□□□□ -0.96
SPIDR-218ENST00000522222 SRCAPQ6ZRS2 3230 aa9.06□□□□□ -0.96
SPIDR-218ENST00000522222 DCAF5Q96JK2 942 aa9.06□□□□□ -0.96
SPIDR-218ENST00000522222 CCNL1Q9UK58 526 aaPredicted RBP9.06□□□□□ -0.96
SPIDR-218ENST00000522222 VIRMAQ69YN4 1812 aaKnown RBP9.05□□□□□ -0.96
SPIDR-218ENST00000522222 TAF1LQ8IZX4 1826 aa9.05□□□□□ -0.96
SPIDR-218ENST00000522222 MAP3K5Q99683 1374 aa9.05□□□□□ -0.96
SPIDR-218ENST00000522222 PRKAR2BP31323 418 aa9.05□□□□□ -0.96
SPIDR-218ENST00000522222 RALBP1Q15311 655 aa9.05□□□□□ -0.96
SPIDR-218ENST00000522222 SLC15A2Q16348 729 aa9.05□□□□□ -0.96
SPIDR-218ENST00000522222 AKAP4Q5JQC9 854 aa9.05□□□□□ -0.96
SPIDR-218ENST00000522222 SMARCC1Q92922 1105 aaPredicted RBP9.05□□□□□ -0.96
SPIDR-218ENST00000522222 PDGFDQ9GZP0 370 aaPredicted RBP9.05□□□□□ -0.96
SPIDR-218ENST00000522222 RSPH6AQ9H0K4 717 aa9.05□□□□□ -0.96
SPIDR-218ENST00000522222 NUDCQ9Y266 331 aa9.05□□□□□ -0.96
SPIDR-218ENST00000522222 C4BP0C0L5 1744 aa9.05□□□□□ -0.96
SPIDR-218ENST00000522222 ERVV-2B6SEH9 535 aa9.04□□□□□ -0.96
SPIDR-218ENST00000522222 U2AF1L5P0DN76 240 aaPredicted RBP9.04□□□□□ -0.96
SPIDR-218ENST00000522222 U2AF1Q01081 240 aaKnown RBP eCLIP9.04□□□□□ -0.96
SPIDR-218ENST00000522222 MTHFSDQ2M296 383 aaKnown RBP9.04□□□□□ -0.96
SPIDR-218ENST00000522222 AKT1S1Q96B36 256 aa9.04□□□□□ -0.96
SPIDR-218ENST00000522222 ASAP1Q9ULH1 1129 aa9.04□□□□□ -0.96
SPIDR-218ENST00000522222 MYBBP1AQ9BQG0 1328 aaKnown RBP9.04□□□□□ -0.96
SPIDR-218ENST00000522222 CICQ96RK0 1608 aaPredicted RBP9.03□□□□□ -0.96
SPIDR-218ENST00000522222 CABP4P57796 275 aa9.03□□□□□ -0.96
SPIDR-218ENST00000522222 ERICH6BQ5W0A0 696 aa9.03□□□□□ -0.96
SPIDR-218ENST00000522222 GAS2L2Q8NHY3 880 aa9.03□□□□□ -0.96
SPIDR-218ENST00000522222 ATG3Q9NT62 314 aa9.03□□□□□ -0.96
SPIDR-218ENST00000522222 ZNF831Q5JPB2 1677 aa9.03□□□□□ -0.96
SPIDR-218ENST00000522222 COL5A3P25940 1745 aaPredicted RBP9.02□□□□□ -0.96
SPIDR-218ENST00000522222 TJP1Q07157 1748 aa9.02□□□□□ -0.96
SPIDR-218ENST00000522222 LOC102724428A0A0B4J2F2 783 aa9.02□□□□□ -0.97
SPIDR-218ENST00000522222 RNMTO43148 476 aaKnown RBP9.02□□□□□ -0.97
SPIDR-218ENST00000522222 SIK1P57059 783 aa9.02□□□□□ -0.97
SPIDR-218ENST00000522222 PHACTR3Q96KR7 559 aa9.02□□□□□ -0.97
SPIDR-218ENST00000522222 UBR3Q6ZT12 1888 aa9.02□□□□□ -0.97
SPIDR-218ENST00000522222 PNPLA7Q6ZV29 1317 aa9.02□□□□□ -0.97
SPIDR-218ENST00000522222 SIPA1L3O60292 1781 aaPredicted RBP9.01□□□□□ -0.97
SPIDR-218ENST00000522222 KCPQ6ZWJ8 1503 aa9.01□□□□□ -0.97
SPIDR-218ENST00000522222 ZBTB7AO95365 584 aa9.01□□□□□ -0.97
SPIDR-218ENST00000522222 ITPK1Q13572 414 aa9.01□□□□□ -0.97
SPIDR-218ENST00000522222 LINC00116Q8NCU8 138 aa9.01□□□□□ -0.97
SPIDR-218ENST00000522222 PRKRIP1Q9H875 184 aaPredicted RBP9.01□□□□□ -0.97
SPIDR-218ENST00000522222 SLC52A2Q9HAB3 445 aa9.01□□□□□ -0.97
SPIDR-218ENST00000522222 LGR6Q9HBX8 967 aa9.01□□□□□ -0.97
SPIDR-218ENST00000522222 UBR2Q8IWV8 1755 aa9.01□□□□□ -0.97
SPIDR-218ENST00000522222 GNAT3A8MTJ3 354 aa9□□□□□ -0.97
SPIDR-218ENST00000522222 FCHSD2O94868 740 aa9□□□□□ -0.97
SPIDR-218ENST00000522222 NFATC2IPQ8NCF5 419 aa9□□□□□ -0.97
SPIDR-218ENST00000522222 SLC4A9Q96Q91 983 aa9□□□□□ -0.97
SPIDR-218ENST00000522222 SPON1Q9HCB6 807 aa9□□□□□ -0.97
SPIDR-218ENST00000522222 TFCP2L1Q9NZI6 479 aa9□□□□□ -0.97
SPIDR-218ENST00000522222 CEMIPQ8WUJ3 1361 aa8.99□□□□□ -0.97
SPIDR-218ENST00000522222 AMIGO3Q86WK7 504 aa8.99□□□□□ -0.97
SPIDR-218ENST00000522222 AK7Q96M32 723 aa8.99□□□□□ -0.97
SPIDR-218ENST00000522222 RBM42Q9BTD8 480 aaKnown RBP8.99□□□□□ -0.97
SPIDR-218ENST00000522222 MTFR1LQ9H019 292 aa8.99□□□□□ -0.97
SPIDR-218ENST00000522222 U3KPZ7 1027 aaPredicted RBP8.99□□□□□ -0.97
SPIDR-218ENST00000522222 COL24A1Q17RW2 1714 aa8.99□□□□□ -0.97
SPIDR-218ENST00000522222 DLG5Q8TDM6 1919 aa8.98□□□□□ -0.97
SPIDR-218ENST00000522222 PTCD1O75127 700 aaKnown RBP8.98□□□□□ -0.97
SPIDR-218ENST00000522222 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
SPIDR-218ENST00000522222 PTGER2P43116 358 aa8.98□□□□□ -0.97
SPIDR-218ENST00000522222 SLC39A6Q13433 755 aa8.98□□□□□ -0.97
SPIDR-218ENST00000522222 IL17REQ8NFR9 667 aa8.98□□□□□ -0.97
SPIDR-218ENST00000522222 ATF5Q9Y2D1 282 aaPredicted RBP8.98□□□□□ -0.97
SPIDR-218ENST00000522222 GNPATO15228 680 aa8.97□□□□□ -0.97
SPIDR-218ENST00000522222 PHF14O94880 888 aa8.97□□□□□ -0.97
SPIDR-218ENST00000522222 TEFQ10587 303 aa8.97□□□□□ -0.97
SPIDR-218ENST00000522222 SMIM5Q71RC9 77 aa8.97□□□□□ -0.97
SPIDR-218ENST00000522222 COL23A1Q86Y22 540 aaPredicted RBP8.97□□□□□ -0.97
SPIDR-218ENST00000522222 PLEKHF1Q96S99 279 aa8.97□□□□□ -0.97
SPIDR-218ENST00000522222 SGIP1Q9BQI5 828 aa8.97□□□□□ -0.97
SPIDR-218ENST00000522222 CNTNAP4Q9C0A0 1308 aa8.97□□□□□ -0.97
SPIDR-218ENST00000522222 MAPK8IP3Q9UPT6 1336 aa8.97□□□□□ -0.97
SPIDR-218ENST00000522222 MYH14Q7Z406 1995 aaKnown RBP8.97□□□□□ -0.97
SPIDR-218ENST00000522222 C4AP0C0L4 1744 aa8.97□□□□□ -0.97
SPIDR-218ENST00000522222 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.96□□□□□ -0.98
SPIDR-218ENST00000522222 ATXN8OSP0DMR3 200 aa8.96□□□□□ -0.98
SPIDR-218ENST00000522222 HMGB2P26583 209 aaKnown RBP8.96□□□□□ -0.98
SPIDR-218ENST00000522222 FKBP8Q14318 412 aa8.96□□□□□ -0.98
SPIDR-218ENST00000522222 MSL1Q68DK7 614 aa8.96□□□□□ -0.98
SPIDR-218ENST00000522222 MCM10Q7L590 875 aa8.96□□□□□ -0.98
SPIDR-218ENST00000522222 PPP1R1BQ9UD71 204 aaPredicted RBP8.96□□□□□ -0.98
SPIDR-218ENST00000522222 NEFMP07197 916 aa8.95□□□□□ -0.98
SPIDR-218ENST00000522222 SSFA2P28290 1259 aa8.95□□□□□ -0.98
SPIDR-218ENST00000522222 DCTN1Q14203 1278 aa8.95□□□□□ -0.98
SPIDR-218ENST00000522222 WDR43Q15061 677 aaKnown RBP eCLIP8.95□□□□□ -0.98
SPIDR-218ENST00000522222 NFE2L2Q16236 605 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms