RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 CLIP2Q9UDT6 1046 aa13.29□□□□□ -0.28
LAMA4-219ENST00000522006 CCDC91Q7Z6B0 441 aa13.29□□□□□ -0.28
LAMA4-219ENST00000522006 MAP9Q49MG5 647 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 CCDC184Q52MB2 194 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 NFE2L2Q16236 605 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 FKBP15Q5T1M5 1219 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 KLHL10Q6JEL2 608 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 PPP1R1BQ9UD71 204 aaPredicted RBP13.28□□□□□ -0.28
LAMA4-219ENST00000522006 KIF18AQ8NI77 898 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 URI1O94763 535 aaPredicted RBP13.28□□□□□ -0.28
LAMA4-219ENST00000522006 FCHSD2O94868 740 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 IGHMBP2P38935 993 aaKnown RBP13.28□□□□□ -0.28
LAMA4-219ENST00000522006 CCDC178Q5BJE1 867 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 GIMAP7Q8NHV1 300 aa13.28□□□□□ -0.28
LAMA4-219ENST00000522006 PPP1R12BO60237 982 aaPredicted RBP13.27□□□□□ -0.28
LAMA4-219ENST00000522006 TOP1P11387 765 aaKnown RBP13.27□□□□□ -0.28
LAMA4-219ENST00000522006 TSG101Q99816 390 aa13.27□□□□□ -0.28
LAMA4-219ENST00000522006 NSD3Q9BZ95 1437 aa13.27□□□□□ -0.28
LAMA4-219ENST00000522006 RAB11FIP3O75154 756 aa13.27□□□□□ -0.28
LAMA4-219ENST00000522006 TMX1Q9H3N1 280 aa13.27□□□□□ -0.28
LAMA4-219ENST00000522006 KIF1BPQ96EK5 621 aa13.27□□□□□ -0.29
LAMA4-219ENST00000522006 U3KPZ7 1027 aaPredicted RBP13.27□□□□□ -0.29
LAMA4-219ENST00000522006 SYNJ2O15056 1496 aa13.27□□□□□ -0.29
LAMA4-219ENST00000522006 GNAT3A8MTJ3 354 aa13.27□□□□□ -0.29
LAMA4-219ENST00000522006 CGNQ9P2M7 1197 aaKnown RBP13.27□□□□□ -0.29
LAMA4-219ENST00000522006 SEC63Q9UGP8 760 aaKnown RBP13.27□□□□□ -0.29
LAMA4-219ENST00000522006 PLEKHH1Q9ULM0 1364 aa13.27□□□□□ -0.29
LAMA4-219ENST00000522006 TMPOP42166 694 aaKnown RBP13.27□□□□□ -0.29
LAMA4-219ENST00000522006 GOPCQ9HD26 462 aa13.27□□□□□ -0.29
LAMA4-219ENST00000522006 MIS18AQ9NYP9 233 aa13.27□□□□□ -0.29
LAMA4-219ENST00000522006 MCM3P25205 808 aa13.26□□□□□ -0.29
LAMA4-219ENST00000522006 KIF4BQ2VIQ3 1234 aa13.26□□□□□ -0.29
LAMA4-219ENST00000522006 AQRO60306 1485 aaKnown RBP eCLIP13.26□□□□□ -0.29
LAMA4-219ENST00000522006 XPCQ01831 940 aaPredicted RBP13.26□□□□□ -0.29
LAMA4-219ENST00000522006 CACNA2D4Q7Z3S7 1137 aa13.26□□□□□ -0.29
LAMA4-219ENST00000522006 GOLGA6L10A0A0M3HER8 536 aa13.26□□□□□ -0.29
LAMA4-219ENST00000522006 METTL24Q5JXM2 366 aa13.26□□□□□ -0.29
LAMA4-219ENST00000522006 BICDL1Q6ZP65 573 aa13.25□□□□□ -0.29
LAMA4-219ENST00000522006 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
LAMA4-219ENST00000522006 WDR97A6NE52 1622 aa13.25□□□□□ -0.29
LAMA4-219ENST00000522006 GLRX3O76003 335 aaKnown RBP13.25□□□□□ -0.29
LAMA4-219ENST00000522006 CETN2P41208 172 aa13.25□□□□□ -0.29
LAMA4-219ENST00000522006 GUCY1B3Q02153 619 aa13.25□□□□□ -0.29
LAMA4-219ENST00000522006 SSFA2P28290 1259 aa13.25□□□□□ -0.29
LAMA4-219ENST00000522006 IFFO1Q0D2I5 559 aa13.25□□□□□ -0.29
LAMA4-219ENST00000522006 LUZP1Q86V48 1076 aa13.25□□□□□ -0.29
LAMA4-219ENST00000522006 NUP88Q99567 741 aaPredicted RBP13.25□□□□□ -0.29
LAMA4-219ENST00000522006 SH2B1Q9NRF2 756 aaPredicted RBP13.25□□□□□ -0.29
LAMA4-219ENST00000522006 ABCF2Q9UG63 623 aa13.25□□□□□ -0.29
LAMA4-219ENST00000522006 IBSPP21815 317 aaPredicted RBP13.24□□□□□ -0.29
LAMA4-219ENST00000522006 DUSP27Q5VZP5 1158 aa13.24□□□□□ -0.29
LAMA4-219ENST00000522006 C8orf76Q96K31 380 aa13.24□□□□□ -0.29
LAMA4-219ENST00000522006 BOLA2Q9H3K6 86 aa13.24□□□□□ -0.29
LAMA4-219ENST00000522006 BCCIPQ9P287 314 aaKnown RBP eCLIP13.24□□□□□ -0.29
LAMA4-219ENST00000522006 AKAP2Q9Y2D5 859 aa13.24□□□□□ -0.29
LAMA4-219ENST00000522006 ATAD2Q6PL18 1390 aa13.24□□□□□ -0.29
LAMA4-219ENST00000522006 POLR3GO15318 223 aaPredicted RBP13.24□□□□□ -0.29
LAMA4-219ENST00000522006 TNNT1P13805 278 aa13.24□□□□□ -0.29
LAMA4-219ENST00000522006 DNA2P51530 1060 aa13.24□□□□□ -0.29
LAMA4-219ENST00000522006 NCAPD3P42695 1498 aa13.24□□□□□ -0.29
LAMA4-219ENST00000522006 MINDY4BA8MYZ0 360 aa13.23□□□□□ -0.29
LAMA4-219ENST00000522006 TRMT1Q9NXH9 659 aaKnown RBP13.23□□□□□ -0.29
LAMA4-219ENST00000522006 POLA1P09884 1462 aaPredicted RBP13.23□□□□□ -0.29
LAMA4-219ENST00000522006 MCM10Q7L590 875 aa13.23□□□□□ -0.29
LAMA4-219ENST00000522006 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
LAMA4-219ENST00000522006 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
LAMA4-219ENST00000522006 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
LAMA4-219ENST00000522006 CKAP2LQ8IYA6 745 aa13.23□□□□□ -0.29
LAMA4-219ENST00000522006 UBA5Q9GZZ9 404 aa13.23□□□□□ -0.29
LAMA4-219ENST00000522006 PHAXQ9H814 394 aaKnown RBP13.23□□□□□ -0.29
LAMA4-219ENST00000522006 TNIP1Q15025 636 aa13.23□□□□□ -0.29
LAMA4-219ENST00000522006 USP25Q9UHP3 1055 aa13.23□□□□□ -0.29
LAMA4-219ENST00000522006 CPLX3Q8WVH0 158 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 TNPO1Q92973 898 aaKnown RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 CTAGE5O15320 804 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 TRIM21P19474 475 aaKnown RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 POLR3DP05423 398 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 ANAPC15P60006 121 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 RNF187Q5TA31 235 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 VPS36Q86VN1 386 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 NKTRP30414 1462 aaKnown RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 GCOM1H8Y6P7 765 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 IFIT1P09914 478 aaKnown RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 MYZAPP0CAP1 466 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 C16orf45Q96MC5 204 aaPredicted RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 MYD88Q99836 296 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 THUMPD2Q9BTF0 503 aaKnown RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 SSRP1Q08945 709 aaKnown RBP13.22□□□□□ -0.29
LAMA4-219ENST00000522006 SKAP1Q86WV1 359 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 ZNF287Q9HBT7 754 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 PLEKHH2Q8IVE3 1493 aa13.22□□□□□ -0.29
LAMA4-219ENST00000522006 HECW1Q76N89 1606 aa13.21□□□□□ -0.29
LAMA4-219ENST00000522006 USO1O60763 962 aaKnown RBP13.21□□□□□ -0.29
LAMA4-219ENST00000522006 CNNM3Q8NE01 707 aa13.21□□□□□ -0.29
LAMA4-219ENST00000522006 YEATS4O95619 227 aa13.21□□□□□ -0.29
LAMA4-219ENST00000522006 HMGB1P09429 215 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms