RNA–Protein interactions for RNA: ENST00000521798.1

SPIDR-215, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 647 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-215ENST00000521798 PSME1Q06323 249 aa10.73□□□□□ -0.69
SPIDR-215ENST00000521798 SH3RF1Q7Z6J0 888 aa10.73□□□□□ -0.69
SPIDR-215ENST00000521798 ZSCAN29Q8IWY8 852 aaPredicted RBP10.73□□□□□ -0.69
SPIDR-215ENST00000521798 PUS7Q96PZ0 661 aaKnown RBP10.73□□□□□ -0.69
SPIDR-215ENST00000521798 SEPT3Q9UH03 358 aa10.73□□□□□ -0.69
SPIDR-215ENST00000521798 TSR3Q9UJK0 312 aaKnown RBP10.73□□□□□ -0.69
SPIDR-215ENST00000521798 DNMT3AQ9Y6K1 912 aaPredicted RBP10.73□□□□□ -0.69
SPIDR-215ENST00000521798 EFCAB5A4FU69 1503 aa10.73□□□□□ -0.69
SPIDR-215ENST00000521798 KDM5BQ9UGL1 1544 aa10.73□□□□□ -0.69
SPIDR-215ENST00000521798 HSP90B1P14625 803 aaKnown RBP10.72□□□□□ -0.69
SPIDR-215ENST00000521798 WEE1P30291 646 aa10.72□□□□□ -0.69
SPIDR-215ENST00000521798 FKBP4Q02790 459 aaKnown RBP eCLIP10.72□□□□□ -0.69
SPIDR-215ENST00000521798 SREK1Q8WXA9 508 aaKnown RBP10.72□□□□□ -0.69
SPIDR-215ENST00000521798 CARD14Q9BXL6 1004 aa10.72□□□□□ -0.69
SPIDR-215ENST00000521798 RGL4Q8IZJ4 473 aa10.71□□□□□ -0.69
SPIDR-215ENST00000521798 HINFPQ9BQA5 517 aa10.71□□□□□ -0.69
SPIDR-215ENST00000521798 BCL11AQ9H165 835 aa10.71□□□□□ -0.69
SPIDR-215ENST00000521798 ABCC10Q5T3U5 1492 aa10.7□□□□□ -0.7
SPIDR-215ENST00000521798 ARHGAP35Q9NRY4 1499 aa10.7□□□□□ -0.7
SPIDR-215ENST00000521798 MAGEB6P1A0A0J9YX57 407 aa10.7□□□□□ -0.7
SPIDR-215ENST00000521798 M0R2N6 131 aa10.7□□□□□ -0.7
SPIDR-215ENST00000521798 PTCD1O75127 700 aaKnown RBP10.7□□□□□ -0.7
SPIDR-215ENST00000521798 ZC3H6P61129 1189 aaKnown RBP10.7□□□□□ -0.7
SPIDR-215ENST00000521798 DRC1Q96MC2 740 aa10.7□□□□□ -0.7
SPIDR-215ENST00000521798 MKNK1Q9BUB5 465 aa10.7□□□□□ -0.7
SPIDR-215ENST00000521798 ASXL2Q76L83 1435 aa10.69□□□□□ -0.7
SPIDR-215ENST00000521798 BCAMP50895 628 aa10.69□□□□□ -0.7
SPIDR-215ENST00000521798 USP4Q13107 963 aa10.69□□□□□ -0.7
SPIDR-215ENST00000521798 FKBP5Q13451 457 aaPredicted RBP10.69□□□□□ -0.7
SPIDR-215ENST00000521798 ERFEQ4G0M1 354 aa10.69□□□□□ -0.7
SPIDR-215ENST00000521798 ADGRD1Q6QNK2 874 aa10.69□□□□□ -0.7
SPIDR-215ENST00000521798 ZCCHC11Q5TAX3 1644 aaKnown RBP10.69□□□□□ -0.7
SPIDR-215ENST00000521798 HRO43593 1189 aa10.68□□□□□ -0.7
SPIDR-215ENST00000521798 LGR5O75473 907 aa10.68□□□□□ -0.7
SPIDR-215ENST00000521798 MTMR3Q13615 1198 aa10.68□□□□□ -0.7
SPIDR-215ENST00000521798 PTCRAQ6ISU1 281 aaPredicted RBP10.68□□□□□ -0.7
SPIDR-215ENST00000521798 DIP2BQ9P265 1576 aa10.68□□□□□ -0.7
SPIDR-215ENST00000521798 GOLGA8CPA6NN73 597 aa10.67□□□□□ -0.7
SPIDR-215ENST00000521798 EAPPQ56P03 285 aaPredicted RBP10.67□□□□□ -0.7
SPIDR-215ENST00000521798 CCDC125Q86Z20 511 aa10.67□□□□□ -0.7
SPIDR-215ENST00000521798 COL26A1Q96A83 441 aa10.67□□□□□ -0.7
SPIDR-215ENST00000521798 SLC10A4Q96EP9 437 aa10.67□□□□□ -0.7
SPIDR-215ENST00000521798 KIF13AQ9H1H9 1805 aa10.67□□□□□ -0.7
SPIDR-215ENST00000521798 RAPGEF6Q8TEU7 1601 aa10.66□□□□□ -0.7
SPIDR-215ENST00000521798 ESPNB1AK53 854 aa10.66□□□□□ -0.7
SPIDR-215ENST00000521798 NBPF20Q3BBV1 942 aa10.66□□□□□ -0.7
SPIDR-215ENST00000521798 CAPN12Q6ZSI9 719 aa10.66□□□□□ -0.7
SPIDR-215ENST00000521798 BPHLQ86WA6 291 aaPredicted RBP10.66□□□□□ -0.7
SPIDR-215ENST00000521798 TSEN2Q8NCE0 465 aaKnown RBP10.66□□□□□ -0.7
SPIDR-215ENST00000521798 HELQQ8TDG4 1101 aa10.66□□□□□ -0.7
SPIDR-215ENST00000521798 PCDHB11Q9Y5F2 797 aa10.66□□□□□ -0.7
SPIDR-215ENST00000521798 ATP10BO94823 1461 aa10.66□□□□□ -0.7
SPIDR-215ENST00000521798 NUP153P49790 1475 aaKnown RBP10.66□□□□□ -0.7
SPIDR-215ENST00000521798 EMP3P54852 163 aa10.65□□□□□ -0.7
SPIDR-215ENST00000521798 TSNAXIP1Q2TAA8 658 aa10.65□□□□□ -0.7
SPIDR-215ENST00000521798 SEPT12Q8IYM1 358 aa10.65□□□□□ -0.7
SPIDR-215ENST00000521798 FAM177A1Q8N128 213 aaPredicted RBP10.65□□□□□ -0.7
SPIDR-215ENST00000521798 PURBQ96QR8 312 aaKnown RBP10.65□□□□□ -0.7
SPIDR-215ENST00000521798 PCDH10Q9P2E7 1040 aa10.65□□□□□ -0.7
SPIDR-215ENST00000521798 CCDC24Q8N4L8 307 aa10.64□□□□□ -0.71
SPIDR-215ENST00000521798 EPRSP07814 1512 aaKnown RBP10.63□□□□□ -0.71
SPIDR-215ENST00000521798 WDR7Q9Y4E6 1490 aa10.63□□□□□ -0.71
SPIDR-215ENST00000521798 ADH1BP00325 375 aa10.63□□□□□ -0.71
SPIDR-215ENST00000521798 NPR3P17342 541 aa10.63□□□□□ -0.71
SPIDR-215ENST00000521798 LSM11P83369 360 aaKnown RBP eCLIP10.63□□□□□ -0.71
SPIDR-215ENST00000521798 C1QTNF2Q9BXJ5 285 aa10.63□□□□□ -0.71
SPIDR-215ENST00000521798 RBCK1Q9BYM8 510 aa10.63□□□□□ -0.71
SPIDR-215ENST00000521798 CLIP1P30622 1438 aa10.63□□□□□ -0.71
SPIDR-215ENST00000521798 FMN1Q68DA7 1419 aa10.63□□□□□ -0.71
SPIDR-215ENST00000521798 GLI2P10070 1586 aa10.62□□□□□ -0.71
SPIDR-215ENST00000521798 FOXO3O43524 673 aa10.62□□□□□ -0.71
SPIDR-215ENST00000521798 IGFBP4P22692 258 aa10.62□□□□□ -0.71
SPIDR-215ENST00000521798 COPS2P61201 443 aa10.62□□□□□ -0.71
SPIDR-215ENST00000521798 MRPL58Q14197 206 aaKnown RBP10.62□□□□□ -0.71
SPIDR-215ENST00000521798 AGERQ15109 404 aa10.62□□□□□ -0.71
SPIDR-215ENST00000521798 NAALADL2Q58DX5 795 aa10.62□□□□□ -0.71
SPIDR-215ENST00000521798 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
SPIDR-215ENST00000521798 FOXJ1Q92949 421 aa10.62□□□□□ -0.71
SPIDR-215ENST00000521798 TLL1O43897 1013 aa10.61□□□□□ -0.71
SPIDR-215ENST00000521798 FAM13AO94988 1023 aa10.61□□□□□ -0.71
SPIDR-215ENST00000521798 P4HBP07237 508 aaKnown RBP10.61□□□□□ -0.71
SPIDR-215ENST00000521798 ZNF511Q8NB15 262 aa10.61□□□□□ -0.71
SPIDR-215ENST00000521798 BAP1Q92560 729 aa10.61□□□□□ -0.71
SPIDR-215ENST00000521798 WNT2BQ93097 391 aa10.61□□□□□ -0.71
SPIDR-215ENST00000521798 CDV3Q9UKY7 258 aaKnown RBP10.61□□□□□ -0.71
SPIDR-215ENST00000521798 SF3A1Q15459 793 aaKnown RBP10.6□□□□□ -0.71
SPIDR-215ENST00000521798 TMC7Q7Z402 723 aa10.6□□□□□ -0.71
SPIDR-215ENST00000521798 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.6□□□□□ -0.71
SPIDR-215ENST00000521798 ZNF358Q9NW07 568 aa10.6□□□□□ -0.71
SPIDR-215ENST00000521798 WBP1LQ9NX94 342 aa10.6□□□□□ -0.71
SPIDR-215ENST00000521798 CEP162Q5TB80 1403 aa10.59□□□□□ -0.71
SPIDR-215ENST00000521798 FAM205CA6NFA0 338 aa10.59□□□□□ -0.71
SPIDR-215ENST00000521798 MYCP01106 439 aaPredicted RBP10.59□□□□□ -0.71
SPIDR-215ENST00000521798 NAA30Q147X3 362 aaPredicted RBP10.59□□□□□ -0.71
SPIDR-215ENST00000521798 TRMT44Q8IYL2 757 aaKnown RBP10.59□□□□□ -0.71
SPIDR-215ENST00000521798 UBXN4Q92575 508 aa10.59□□□□□ -0.71
SPIDR-215ENST00000521798 STAC3Q96MF2 364 aa10.59□□□□□ -0.71
SPIDR-215ENST00000521798 BACH2Q9BYV9 841 aa10.59□□□□□ -0.71
SPIDR-215ENST00000521798 ERCC5P28715 1186 aaPredicted RBP10.58□□□□□ -0.72
SPIDR-215ENST00000521798 LINC01559Q495D7 138 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms