RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 UNC5CLQ8IV45 518 aa5.68□□□□□ -1.5
PVT1-211ENST00000521600 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.68□□□□□ -1.5
PVT1-211ENST00000521600 LIMD1Q9UGP4 676 aa5.68□□□□□ -1.5
PVT1-211ENST00000521600 SEPT9Q9UHD8 586 aaPredicted RBP5.68□□□□□ -1.5
PVT1-211ENST00000521600 RABGEF1Q9UJ41 708 aa5.68□□□□□ -1.5
PVT1-211ENST00000521600 THSD7AQ9UPZ6 1657 aa5.68□□□□□ -1.5
PVT1-211ENST00000521600 NRKQ7Z2Y5 1582 aa5.67□□□□□ -1.5
PVT1-211ENST00000521600 MYOM3Q5VTT5 1437 aa5.67□□□□□ -1.5
PVT1-211ENST00000521600 ADGRL2O95490 1459 aa5.67□□□□□ -1.5
PVT1-211ENST00000521600 FAM50AQ14320 339 aaKnown RBP5.67□□□□□ -1.5
PVT1-211ENST00000521600 FAM182BQ5T319 152 aa5.67□□□□□ -1.5
PVT1-211ENST00000521600 ADGRB2O60241 1585 aa5.67□□□□□ -1.5
PVT1-211ENST00000521600 RAB3GAP2Q9H2M9 1393 aa5.67□□□□□ -1.5
PVT1-211ENST00000521600 NINLQ9Y2I6 1382 aa5.67□□□□□ -1.5
PVT1-211ENST00000521600 XPCQ01831 940 aaPredicted RBP5.66□□□□□ -1.5
PVT1-211ENST00000521600 CSPP1Q1MSJ5 1256 aa5.66□□□□□ -1.5
PVT1-211ENST00000521600 SWT1Q5T5J6 900 aaKnown RBP5.66□□□□□ -1.5
PVT1-211ENST00000521600 RIC3Q7Z5B4 369 aa5.66□□□□□ -1.5
PVT1-211ENST00000521600 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.66□□□□□ -1.5
PVT1-211ENST00000521600 ACIN1Q9UKV3 1341 aaKnown RBP5.66□□□□□ -1.5
PVT1-211ENST00000521600 DAPK1P53355 1430 aa5.65□□□□□ -1.5
PVT1-211ENST00000521600 MOXD2PA6NHM9 499 aa5.65□□□□□ -1.5
PVT1-211ENST00000521600 NDUFV2P19404 249 aa5.65□□□□□ -1.5
PVT1-211ENST00000521600 ITGAEP38570 1179 aa5.65□□□□□ -1.5
PVT1-211ENST00000521600 VPS72Q15906 364 aa5.65□□□□□ -1.5
PVT1-211ENST00000521600 ZNF687Q8N1G0 1237 aa5.65□□□□□ -1.5
PVT1-211ENST00000521600 FAM163AQ96GL9 167 aaPredicted RBP5.65□□□□□ -1.5
PVT1-211ENST00000521600 CAMKK2Q96RR4 588 aa5.65□□□□□ -1.5
PVT1-211ENST00000521600 SLC4A5Q9BY07 1137 aa5.65□□□□□ -1.5
PVT1-211ENST00000521600 SHANK3Q9BYB0 1731 aa5.65□□□□□ -1.51
PVT1-211ENST00000521600 CDC42BPGQ6DT37 1551 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 CENPBP07199 599 aaPredicted RBP5.64□□□□□ -1.51
PVT1-211ENST00000521600 SLC10A3P09131 477 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 PBX2P40425 430 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 RFC5P40937 340 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 HDGFP51858 240 aaKnown RBP5.64□□□□□ -1.51
PVT1-211ENST00000521600 MCM6Q14566 821 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 RSBN1LQ6PCB5 846 aaPredicted RBP5.64□□□□□ -1.51
PVT1-211ENST00000521600 HS3ST6Q96QI5 342 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 VPS9D1Q9Y2B5 631 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 FMN2Q9NZ56 1722 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 CRYBG1Q9Y4K1 1723 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 SBF2Q86WG5 1849 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 ROBO2Q9HCK4 1378 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 NEXMIFQ5QGS0 1516 aa5.64□□□□□ -1.51
PVT1-211ENST00000521600 PCNTO95613 3336 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 POTEB3A0JP26 581 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 SPTLC1O15269 473 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 KDM4AO75164 1064 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 GCGRP47871 477 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 FAM98CQ17RN3 349 aaKnown RBP5.63□□□□□ -1.51
PVT1-211ENST00000521600 POTEBQ6S5H4 581 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 CLUAP1Q96AJ1 413 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 NPHP3Q7Z494 1330 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 HFM1A2PYH4 1435 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 KIF1AQ12756 1690 aa5.63□□□□□ -1.51
PVT1-211ENST00000521600 IFT172Q9UG01 1749 aa5.62□□□□□ -1.51
PVT1-211ENST00000521600 RNF40O75150 1001 aa5.62□□□□□ -1.51
PVT1-211ENST00000521600 NBPF3Q9H094 633 aa5.62□□□□□ -1.51
PVT1-211ENST00000521600 PPP1R1BQ9UD71 204 aaPredicted RBP5.62□□□□□ -1.51
PVT1-211ENST00000521600 PCDHB15Q9Y5E8 787 aa5.62□□□□□ -1.51
PVT1-211ENST00000521600 RGPD3A6NKT7 1758 aaPredicted RBP5.62□□□□□ -1.51
PVT1-211ENST00000521600 COL14A1Q05707 1796 aaKnown RBP5.62□□□□□ -1.51
PVT1-211ENST00000521600 RGPD4Q7Z3J3 1758 aa5.62□□□□□ -1.51
PVT1-211ENST00000521600 A0A0G2JS52 829 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 HOXA2O43364 376 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 FOXO3O43524 673 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 KCNQ2O43526 872 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 KIF1BO60333 1816 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 TRIM37O94972 964 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 SLC4A3P48751 1232 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 CLTCL1P53675 1640 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 MYT1Q01538 1121 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 QPCTQ16769 361 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 TUSC1Q2TAM9 212 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 SPATA31A3Q5VYP0 1347 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 PPP2R2DQ66LE6 453 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 SAMD7Q7Z3H4 446 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 PRAG1Q86YV5 1406 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 SLF2Q8IX21 1173 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 CABLES1Q8TDN4 633 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 SPON1Q9HCB6 807 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 CHIC2Q9UKJ5 165 aa5.61□□□□□ -1.51
PVT1-211ENST00000521600 CCDC9Q9Y3X0 531 aaKnown RBP5.61□□□□□ -1.51
PVT1-211ENST00000521600 TRPM3Q9HCF6 1732 aaPredicted RBP5.6□□□□□ -1.51
PVT1-211ENST00000521600 ALS2Q96Q42 1657 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 PARD3Q8TEW0 1356 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 ANKRD30AQ9BXX3 1397 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 BHMG1C9JSJ3 638 aaPredicted RBP5.6□□□□□ -1.51
PVT1-211ENST00000521600 FDX1P10109 184 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 USP46P62068 366 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 GUCA2AQ02747 115 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 ESCO1Q5FWF5 840 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 LAPTM4BQ86VI4 370 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 HLA-CQ95604 372 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 PDGFDQ9GZP0 370 aaPredicted RBP5.6□□□□□ -1.51
PVT1-211ENST00000521600 SNRKQ9NRH2 765 aa5.6□□□□□ -1.51
PVT1-211ENST00000521600 FAM83GA6ND36 823 aa5.59□□□□□ -1.51
PVT1-211ENST00000521600 SPDYE5A6NIY4 337 aa5.59□□□□□ -1.51
PVT1-211ENST00000521600 A6NJR5 290 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms