RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 IP6K1Q92551 441 aa11.12□□□□□ -0.63
HMBOX1-208ENST00000521516 TMF1P82094 1093 aa11.11□□□□□ -0.63
HMBOX1-208ENST00000521516 GNPATO15228 680 aa11.11□□□□□ -0.63
HMBOX1-208ENST00000521516 MAP2K1Q02750 393 aaPredicted RBP11.11□□□□□ -0.63
HMBOX1-208ENST00000521516 RASSF7Q02833 373 aa11.11□□□□□ -0.63
HMBOX1-208ENST00000521516 PRPF38BQ5VTL8 546 aaKnown RBP11.11□□□□□ -0.63
HMBOX1-208ENST00000521516 CGNL1Q0VF96 1302 aa11.1□□□□□ -0.63
HMBOX1-208ENST00000521516 KTN1Q86UP2 1357 aaKnown RBP11.09□□□□□ -0.63
HMBOX1-208ENST00000521516 MPRIPQ6WCQ1 1025 aa11.09□□□□□ -0.63
HMBOX1-208ENST00000521516 PPARGC1BQ86YN6 1023 aaKnown RBP11.09□□□□□ -0.63
HMBOX1-208ENST00000521516 TIAM2Q8IVF5 1701 aa11.09□□□□□ -0.63
HMBOX1-208ENST00000521516 PARP3Q9Y6F1 533 aa11.09□□□□□ -0.63
HMBOX1-208ENST00000521516 MON2Q7Z3U7 1717 aa11.08□□□□□ -0.64
HMBOX1-208ENST00000521516 LOC102724428A0A0B4J2F2 783 aa11.08□□□□□ -0.64
HMBOX1-208ENST00000521516 RASSF10A6NK89 507 aa11.08□□□□□ -0.64
HMBOX1-208ENST00000521516 TMEM88BA6NKF7 163 aa11.08□□□□□ -0.64
HMBOX1-208ENST00000521516 SIK1P57059 783 aa11.08□□□□□ -0.64
HMBOX1-208ENST00000521516 GYS1P13807 737 aa11.08□□□□□ -0.64
HMBOX1-208ENST00000521516 ITPK1Q13572 414 aa11.08□□□□□ -0.64
HMBOX1-208ENST00000521516 LTV1Q96GA3 475 aaPredicted RBP11.08□□□□□ -0.64
HMBOX1-208ENST00000521516 EVC2Q86UK5 1308 aa11.07□□□□□ -0.64
HMBOX1-208ENST00000521516 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
HMBOX1-208ENST00000521516 POTEJP0CG39 1038 aa11.07□□□□□ -0.64
HMBOX1-208ENST00000521516 NBPF1Q3BBV0 1214 aa11.07□□□□□ -0.64
HMBOX1-208ENST00000521516 NME9Q86XW9 330 aa11.07□□□□□ -0.64
HMBOX1-208ENST00000521516 TRAPPC3LQ5T215 181 aa11.07□□□□□ -0.64
HMBOX1-208ENST00000521516 CD163L1Q9NR16 1453 aa11.06□□□□□ -0.64
HMBOX1-208ENST00000521516 THSD7BQ9C0I4 1608 aa11.06□□□□□ -0.64
HMBOX1-208ENST00000521516 PIGBQ92521 554 aa11.06□□□□□ -0.64
HMBOX1-208ENST00000521516 CFAP44Q96MT7 982 aa11.06□□□□□ -0.64
HMBOX1-208ENST00000521516 MCOLN1Q9GZU1 580 aa11.06□□□□□ -0.64
HMBOX1-208ENST00000521516 SBNO2Q9Y2G9 1366 aa11.06□□□□□ -0.64
HMBOX1-208ENST00000521516 ITGB4P16144 1822 aa11.06□□□□□ -0.64
HMBOX1-208ENST00000521516 ADRA2BP18089 450 aa11.05□□□□□ -0.64
HMBOX1-208ENST00000521516 CHRNA5P30532 468 aa11.05□□□□□ -0.64
HMBOX1-208ENST00000521516 DPY19L2Q6NUT2 758 aa11.05□□□□□ -0.64
HMBOX1-208ENST00000521516 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■□□□□ 9.3
HMBOX1-208ENST00000521516 PCDH11XQ9BZA7 1347 aa11.05□□□□□ -0.64
HMBOX1-208ENST00000521516 PCDH11YQ9BZA8 1340 aa11.05□□□□□ -0.64
HMBOX1-208ENST00000521516 WDR33Q9C0J8 1336 aaKnown RBP11.05□□□□□ -0.64
HMBOX1-208ENST00000521516 ITGBL1O95965 494 aaPredicted RBP11.05□□□□□ -0.64
HMBOX1-208ENST00000521516 RGPD2P0DJD1 1756 aa11.04□□□□□ -0.64
HMBOX1-208ENST00000521516 DEFB115Q30KQ5 88 aa11.04□□□□□ -0.64
HMBOX1-208ENST00000521516 ARHGEF1Q92888 912 aaKnown RBP11.04□□□□□ -0.64
HMBOX1-208ENST00000521516 RTCBQ9Y3I0 505 aaKnown RBP11.04□□□□□ -0.64
HMBOX1-208ENST00000521516 LDHDQ86WU2 507 aa11.04□□□□□ -0.64
HMBOX1-208ENST00000521516 NFKBIEO00221 500 aa11.03□□□□□ -0.64
HMBOX1-208ENST00000521516 CYP27B1O15528 508 aa11.03□□□□□ -0.64
HMBOX1-208ENST00000521516 HOXC9P31274 260 aa11.03□□□□□ -0.64
HMBOX1-208ENST00000521516 MAP3K19Q56UN5 1328 aa11.02□□□□□ -0.64
HMBOX1-208ENST00000521516 ATP6V1AP38606 617 aa11.02□□□□□ -0.65
HMBOX1-208ENST00000521516 DDR1Q08345 913 aa11.02□□□□□ -0.65
HMBOX1-208ENST00000521516 NBPF6Q5VWK0 638 aa11.02□□□□□ -0.65
HMBOX1-208ENST00000521516 RAPGEF4Q8WZA2 1011 aa11.02□□□□□ -0.65
HMBOX1-208ENST00000521516 NBPF4Q96M43 638 aa11.02□□□□□ -0.65
HMBOX1-208ENST00000521516 RC3H1Q5TC82 1133 aaKnown RBP11.01□□□□□ -0.65
HMBOX1-208ENST00000521516 NKX1-1Q15270 411 aaPredicted RBP11.01□□□□□ -0.65
HMBOX1-208ENST00000521516 CCDC88AQ3V6T2 1871 aa11.01□□□□□ -0.65
HMBOX1-208ENST00000521516 TATP17735 454 aaPredicted RBP11□□□□□ -0.65
HMBOX1-208ENST00000521516 RFC4P35249 363 aa11□□□□□ -0.65
HMBOX1-208ENST00000521516 LTBP1Q14766 1721 aa11□□□□□ -0.65
HMBOX1-208ENST00000521516 KDRP35968 1356 aa11□□□□□ -0.65
HMBOX1-208ENST00000521516 SMG6Q86US8 1419 aaKnown RBP11□□□□□ -0.65
HMBOX1-208ENST00000521516 BEGAINQ9BUH8 593 aa11□□□□□ -0.65
HMBOX1-208ENST00000521516 ASAP1Q9ULH1 1129 aa11□□□□□ -0.65
HMBOX1-208ENST00000521516 RPS6KA4O75676 772 aa10.99□□□□□ -0.65
HMBOX1-208ENST00000521516 ZNF831Q5JPB2 1677 aa10.99□□□□□ -0.65
HMBOX1-208ENST00000521516 TAF1DQ9H5J8 278 aaPredicted RBP10.99□□□□□ -0.65
HMBOX1-208ENST00000521516 CNTNAP4Q9C0A0 1308 aa10.98□□□□□ -0.65
HMBOX1-208ENST00000521516 DICER1Q9UPY3 1922 aaKnown RBP10.98□□□□□ -0.65
HMBOX1-208ENST00000521516 EDC4Q6P2E9 1401 aaKnown RBP10.98□□□□□ -0.65
HMBOX1-208ENST00000521516 IQCA1LA6NCM1 817 aa10.98□□□□□ -0.65
HMBOX1-208ENST00000521516 USHBP1Q8N6Y0 703 aa10.98□□□□□ -0.65
HMBOX1-208ENST00000521516 L3MBTL3Q96JM7 780 aaPredicted RBP10.98□□□□□ -0.65
HMBOX1-208ENST00000521516 DLEC1Q9Y238 1755 aa10.98□□□□□ -0.65
HMBOX1-208ENST00000521516 ADAMTSL1Q8N6G6 1762 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 POLRMTO00411 1230 aaKnown RBP10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 DDNO94850 711 aaPredicted RBP10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 FKBP8Q14318 412 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 ERFEQ4G0M1 354 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 GCC1Q96CN9 775 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 DGKZQ13574 1117 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 TTLL6Q8N841 843 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 SLC4A9Q96Q91 983 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 ATG3Q9NT62 314 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 RTL1A6NKG5 1358 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 SCN4AP35499 1836 aa10.97□□□□□ -0.65
HMBOX1-208ENST00000521516 CA12O43570 354 aa10.96□□□□□ -0.65
HMBOX1-208ENST00000521516 TM4SF1P30408 202 aa10.96□□□□□ -0.65
HMBOX1-208ENST00000521516 AMPHP49418 695 aa10.96□□□□□ -0.65
HMBOX1-208ENST00000521516 CAPNS2Q96L46 248 aa10.96□□□□□ -0.65
HMBOX1-208ENST00000521516 TSKSQ9UJT2 592 aa10.96□□□□□ -0.65
HMBOX1-208ENST00000521516 COL5A3P25940 1745 aaPredicted RBP10.96□□□□□ -0.65
HMBOX1-208ENST00000521516 ECE1P42892 770 aa10.96□□□□□ -0.66
HMBOX1-208ENST00000521516 GPR101Q96P66 508 aaPredicted RBP10.96□□□□□ -0.66
HMBOX1-208ENST00000521516 TMOD3Q9NYL9 352 aa10.96□□□□□ -0.66
HMBOX1-208ENST00000521516 USP42Q9H9J4 1324 aaKnown RBP10.95□□□□□ -0.66
HMBOX1-208ENST00000521516 SOX10P56693 466 aa10.95□□□□□ -0.66
HMBOX1-208ENST00000521516 LTBP3Q9NS15 1303 aa10.95□□□□□ -0.66
HMBOX1-208ENST00000521516 ABT1Q9ULW3 272 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 543 ms