RNA–Protein interactions for RNA: ENST00000521179.5

TVP23C-206, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

TSL 5

Gene TVP23C, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-206ENST00000521179 ATP1A2P50993 1020 aa10.5□□□□□ -0.73
TVP23C-206ENST00000521179 SRPK2P78362 688 aaKnown RBP10.5□□□□□ -0.73
TVP23C-206ENST00000521179 CLN3Q13286 438 aa10.5□□□□□ -0.73
TVP23C-206ENST00000521179 KIFC2Q96AC6 838 aa10.5□□□□□ -0.73
TVP23C-206ENST00000521179 XAGE2Q96GT9 111 aa10.5□□□□□ -0.73
TVP23C-206ENST00000521179 TRIM47Q96LD4 638 aa10.5□□□□□ -0.73
TVP23C-206ENST00000521179 VRTNQ9H8Y1 702 aa10.5□□□□□ -0.73
TVP23C-206ENST00000521179 RAD54L2Q9Y4B4 1467 aa10.49□□□□□ -0.73
TVP23C-206ENST00000521179 RFX1P22670 979 aa10.49□□□□□ -0.73
TVP23C-206ENST00000521179 CLDN10P78369 228 aa10.49□□□□□ -0.73
TVP23C-206ENST00000521179 INSM2Q96T92 566 aaPredicted RBP10.49□□□□□ -0.73
TVP23C-206ENST00000521179 ARHGEF10LQ9HCE6 1279 aa10.49□□□□□ -0.73
TVP23C-206ENST00000521179 SOS2Q07890 1332 aaPredicted RBP10.49□□□□□ -0.73
TVP23C-206ENST00000521179 AQRO60306 1485 aaKnown RBP eCLIP10.49□□□□□ -0.73
TVP23C-206ENST00000521179 FGD5Q6ZNL6 1462 aa10.49□□□□□ -0.73
TVP23C-206ENST00000521179 POTECB2RU33 542 aa10.48□□□□□ -0.73
TVP23C-206ENST00000521179 WASLO00401 505 aaPredicted RBP10.48□□□□□ -0.73
TVP23C-206ENST00000521179 SCNN1DP51172 638 aa10.48□□□□□ -0.73
TVP23C-206ENST00000521179 ESCO1Q5FWF5 840 aa10.48□□□□□ -0.73
TVP23C-206ENST00000521179 LARGE2Q8N3Y3 721 aa10.48□□□□□ -0.73
TVP23C-206ENST00000521179 OGFOD1Q8N543 542 aa10.48□□□□□ -0.73
TVP23C-206ENST00000521179 ESYT1Q9BSJ8 1104 aa10.48□□□□□ -0.73
TVP23C-206ENST00000521179 ETNK1Q9HBU6 452 aa10.48□□□□□ -0.73
TVP23C-206ENST00000521179 DNAAF2Q9NVR5 837 aaKnown RBP10.48□□□□□ -0.73
TVP23C-206ENST00000521179 HRH3Q9Y5N1 445 aa10.48□□□□□ -0.73
TVP23C-206ENST00000521179 TARBP1Q13395 1621 aaKnown RBP10.47□□□□□ -0.73
TVP23C-206ENST00000521179 IL2RAP01589 272 aa10.47□□□□□ -0.73
TVP23C-206ENST00000521179 CTSOP43234 321 aaPredicted RBP10.47□□□□□ -0.73
TVP23C-206ENST00000521179 RNF144AP50876 292 aaPredicted RBP10.47□□□□□ -0.73
TVP23C-206ENST00000521179 TDRD9Q8NDG6 1382 aaKnown RBP10.47□□□□□ -0.73
TVP23C-206ENST00000521179 TTLL8A6PVC2 850 aa10.46□□□□□ -0.73
TVP23C-206ENST00000521179 TMEM229AB2RXF0 380 aa10.46□□□□□ -0.73
TVP23C-206ENST00000521179 MEN1O00255 615 aa10.46□□□□□ -0.73
TVP23C-206ENST00000521179 STAU1O95793 577 aaKnown RBP10.46□□□□□ -0.73
TVP23C-206ENST00000521179 INHAP05111 366 aa10.46□□□□□ -0.73
TVP23C-206ENST00000521179 RASA1P20936 1047 aa10.46□□□□□ -0.73
TVP23C-206ENST00000521179 GPC1P35052 558 aa10.46□□□□□ -0.73
TVP23C-206ENST00000521179 GDF10P55107 478 aa10.46□□□□□ -0.73
TVP23C-206ENST00000521179 CNKSR1Q969H4 720 aa10.46□□□□□ -0.73
TVP23C-206ENST00000521179 RAB6BQ9NRW1 208 aa10.46□□□□□ -0.73
TVP23C-206ENST00000521179 FAM196BA6NMK8 535 aa10.45□□□□□ -0.74
TVP23C-206ENST00000521179 DKK1O94907 266 aa10.45□□□□□ -0.74
TVP23C-206ENST00000521179 CCDC102BQ68D86 513 aa10.45□□□□□ -0.74
TVP23C-206ENST00000521179 LARP1Q6PKG0 1096 aaKnown RBP10.45□□□□□ -0.74
TVP23C-206ENST00000521179 SIX5Q8N196 739 aa10.45□□□□□ -0.74
TVP23C-206ENST00000521179 NLRP3Q96P20 1036 aa10.45□□□□□ -0.74
TVP23C-206ENST00000521179 POLMQ9NP87 494 aaPredicted RBP10.45□□□□□ -0.74
TVP23C-206ENST00000521179 KIAA1024Q9UPX6 916 aa10.45□□□□□ -0.74
TVP23C-206ENST00000521179 WRNQ14191 1432 aaPredicted RBP eCLIP10.44□□□□□ -0.74
TVP23C-206ENST00000521179 C11orf95C9JLR9 678 aaPredicted RBP10.44□□□□□ -0.74
TVP23C-206ENST00000521179 SNRPBP14678 240 aaKnown RBP10.44□□□□□ -0.74
TVP23C-206ENST00000521179 PSME1Q06323 249 aa10.44□□□□□ -0.74
TVP23C-206ENST00000521179 PTK7Q13308 1070 aa10.44□□□□□ -0.74
TVP23C-206ENST00000521179 CRTC2Q53ET0 693 aaPredicted RBP10.44□□□□□ -0.74
TVP23C-206ENST00000521179 FOXD4L5Q5VV16 416 aaPredicted RBP10.44□□□□□ -0.74
TVP23C-206ENST00000521179 SLC4A9Q96Q91 983 aa10.44□□□□□ -0.74
TVP23C-206ENST00000521179 EIF4G3O43432 1585 aaKnown RBP10.43□□□□□ -0.74
TVP23C-206ENST00000521179 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.43□□□□□ -0.74
TVP23C-206ENST00000521179 CENPCQ03188 943 aa10.43□□□□□ -0.74
TVP23C-206ENST00000521179 CDCA8Q53HL2 280 aa10.43□□□□□ -0.74
TVP23C-206ENST00000521179 TPCN2Q8NHX9 752 aa10.43□□□□□ -0.74
TVP23C-206ENST00000521179 RNF217Q8TC41 542 aa10.43□□□□□ -0.74
TVP23C-206ENST00000521179 PBXIP1Q96AQ6 731 aa10.43□□□□□ -0.74
TVP23C-206ENST00000521179 GRIP2Q9C0E4 1043 aa10.43□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L15C9J2P7 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L10C9JJH3 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L13C9JLJ4 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L12C9JPN9 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L11C9JVI0 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L21D6R901 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L18D6R9N7 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L22D6RA61 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L17D6RBQ6 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L19D6RCP7 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L20D6RJB6 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 USP17L24Q0WX57 530 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 ZNF787Q6DD87 383 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.42□□□□□ -0.74
TVP23C-206ENST00000521179 ZNF594Q96JF6 807 aaPredicted RBP10.42□□□□□ -0.74
TVP23C-206ENST00000521179 ZNF358Q9NW07 568 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 DNMT3LQ9UJW3 386 aa10.42□□□□□ -0.74
TVP23C-206ENST00000521179 FHDC1Q9C0D6 1143 aaPredicted RBP10.41□□□□□ -0.74
TVP23C-206ENST00000521179 FIGNL2A6NMB9 653 aa10.4□□□□□ -0.74
TVP23C-206ENST00000521179 M0R2N6 131 aa10.4□□□□□ -0.74
TVP23C-206ENST00000521179 BACH1O14867 736 aa10.4□□□□□ -0.74
TVP23C-206ENST00000521179 MAN1A2O60476 641 aa10.4□□□□□ -0.74
TVP23C-206ENST00000521179 PPP1R15AO75807 674 aaPredicted RBP10.4□□□□□ -0.74
TVP23C-206ENST00000521179 ATG7O95352 703 aa10.4□□□□□ -0.74
TVP23C-206ENST00000521179 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.4□□□□□ -0.74
TVP23C-206ENST00000521179 TOP2BQ02880 1626 aa10.4□□□□□ -0.75
TVP23C-206ENST00000521179 SYNJ1O43426 1573 aa10.39□□□□□ -0.75
TVP23C-206ENST00000521179 SMTNP53814 917 aa10.39□□□□□ -0.75
TVP23C-206ENST00000521179 ELOAQ14241 798 aaKnown RBP10.39□□□□□ -0.75
TVP23C-206ENST00000521179 ANKMY2Q8IV38 441 aa10.39□□□□□ -0.75
TVP23C-206ENST00000521179 ARXQ96QS3 562 aa10.39□□□□□ -0.75
TVP23C-206ENST00000521179 SERTAD1Q9UHV2 236 aa10.39□□□□□ -0.75
TVP23C-206ENST00000521179 CHD1O14646 1710 aa10.38□□□□□ -0.75
TVP23C-206ENST00000521179 BIVM-ERCC5R4GMW8 1640 aa10.38□□□□□ -0.75
TVP23C-206ENST00000521179 SOBPA7XYQ1 873 aa10.38□□□□□ -0.75
TVP23C-206ENST00000521179 DPYDQ12882 1025 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms