RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
SPARC-202ENST00000520687 NPHP3Q7Z494 1330 aa12.55□□□□□ -0.4
SPARC-202ENST00000520687 ZBTB7BO15156 539 aaPredicted RBP12.55□□□□□ -0.4
SPARC-202ENST00000520687 MTHFSDQ2M296 383 aaKnown RBP12.55□□□□□ -0.4
SPARC-202ENST00000520687 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
SPARC-202ENST00000520687 TSPYL6Q8N831 410 aa12.55□□□□□ -0.4
SPARC-202ENST00000520687 GCC1Q96CN9 775 aa12.55□□□□□ -0.4
SPARC-202ENST00000520687 FAM83GA6ND36 823 aa12.54□□□□□ -0.4
SPARC-202ENST00000520687 GNAT3A8MTJ3 354 aa12.54□□□□□ -0.4
SPARC-202ENST00000520687 EIF5BO60841 1220 aaKnown RBP12.54□□□□□ -0.4
SPARC-202ENST00000520687 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
SPARC-202ENST00000520687 LTN1O94822 1766 aa12.54□□□□□ -0.4
SPARC-202ENST00000520687 TRPM3Q9HCF6 1732 aaPredicted RBP12.54□□□□□ -0.4
SPARC-202ENST00000520687 SOX12O15370 315 aa12.53□□□□□ -0.4
SPARC-202ENST00000520687 CAMKK2Q96RR4 588 aa12.53□□□□□ -0.4
SPARC-202ENST00000520687 ORAI2Q96SN7 254 aa12.53□□□□□ -0.4
SPARC-202ENST00000520687 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
SPARC-202ENST00000520687 CEP350Q5VT06 3117 aa12.52□□□□□ -0.4
SPARC-202ENST00000520687 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.4
SPARC-202ENST00000520687 NWD2Q9ULI1 1742 aa12.52□□□□□ -0.4
SPARC-202ENST00000520687 DCTN1Q14203 1278 aa12.52□□□□□ -0.41
SPARC-202ENST00000520687 MCM10Q7L590 875 aa12.52□□□□□ -0.41
SPARC-202ENST00000520687 NPM2Q86SE8 214 aaKnown RBP12.52□□□□□ -0.41
SPARC-202ENST00000520687 TSPYL4Q9UJ04 414 aa12.52□□□□□ -0.41
SPARC-202ENST00000520687 MAP3K5Q99683 1374 aa12.51□□□□□ -0.41
SPARC-202ENST00000520687 NFAT5O94916 1531 aa12.51□□□□□ -0.41
SPARC-202ENST00000520687 SLC34A2O95436 690 aa12.51□□□□□ -0.41
SPARC-202ENST00000520687 NUCB1Q02818 461 aa12.51□□□□□ -0.41
SPARC-202ENST00000520687 DAXXQ9UER7 740 aaPredicted RBP12.51□□□□□ -0.41
SPARC-202ENST00000520687 PXDNQ92626 1479 aa12.5□□□□□ -0.41
SPARC-202ENST00000520687 ELL2O00472 640 aaPredicted RBP12.5□□□□□ -0.41
SPARC-202ENST00000520687 AMOTQ4VCS5 1084 aa12.5□□□□□ -0.41
SPARC-202ENST00000520687 SKAP1Q86WV1 359 aa12.5□□□□□ -0.41
SPARC-202ENST00000520687 PLEKHG2Q9H7P9 1386 aa12.5□□□□□ -0.41
SPARC-202ENST00000520687 RREB1Q92766 1687 aa12.5□□□□□ -0.41
SPARC-202ENST00000520687 USP19O94966 1318 aa12.49□□□□□ -0.41
SPARC-202ENST00000520687 SLIT3O75094 1523 aa12.49□□□□□ -0.41
SPARC-202ENST00000520687 TAF7Q15545 349 aaPredicted RBP12.49□□□□□ -0.41
SPARC-202ENST00000520687 RPAP2Q8IXW5 612 aaPredicted RBP12.49□□□□□ -0.41
SPARC-202ENST00000520687 ALS2Q96Q42 1657 aa12.49□□□□□ -0.41
SPARC-202ENST00000520687 HOXB7P09629 217 aa12.48□□□□□ -0.41
SPARC-202ENST00000520687 CCT4P50991 539 aaKnown RBP12.48□□□□□ -0.41
SPARC-202ENST00000520687 CCDC30Q5VVM6 783 aa12.48□□□□□ -0.41
SPARC-202ENST00000520687 NUTM2GQ5VZR2 741 aa12.48□□□□□ -0.41
SPARC-202ENST00000520687 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
SPARC-202ENST00000520687 STK31Q9BXU1 1019 aa12.48□□□□□ -0.41
SPARC-202ENST00000520687 NUP188Q5SRE5 1749 aa12.48□□□□□ -0.41
SPARC-202ENST00000520687 PLCH1Q4KWH8 1693 aa12.48□□□□□ -0.41
SPARC-202ENST00000520687 GCP02774 474 aa12.47□□□□□ -0.41
SPARC-202ENST00000520687 PLEKHO1Q53GL0 409 aaPredicted RBP12.47□□□□□ -0.41
SPARC-202ENST00000520687 KRT28Q7Z3Y7 464 aa12.47□□□□□ -0.41
SPARC-202ENST00000520687 NCAPD2Q15021 1401 aa12.47□□□□□ -0.41
SPARC-202ENST00000520687 CHD1LQ86WJ1 897 aa12.47□□□□□ -0.41
SPARC-202ENST00000520687 OVOS2A0A0G2JMS6 1433 aa12.47□□□□□ -0.41
SPARC-202ENST00000520687 LRRC37A3O60309 1634 aa12.46□□□□□ -0.41
SPARC-202ENST00000520687 FOXO3O43524 673 aa12.46□□□□□ -0.42
SPARC-202ENST00000520687 FAM98CQ17RN3 349 aaKnown RBP12.46□□□□□ -0.42
SPARC-202ENST00000520687 PCDH10Q9P2E7 1040 aa12.46□□□□□ -0.42
SPARC-202ENST00000520687 CEMIPQ8WUJ3 1361 aa12.45□□□□□ -0.42
SPARC-202ENST00000520687 APBA3O96018 575 aa12.45□□□□□ -0.42
SPARC-202ENST00000520687 SLC4A2P04920 1241 aa12.45□□□□□ -0.42
SPARC-202ENST00000520687 BECN1Q14457 450 aa12.45□□□□□ -0.42
SPARC-202ENST00000520687 AKAP4Q5JQC9 854 aa12.45□□□□□ -0.42
SPARC-202ENST00000520687 HMMRO75330 724 aa12.44□□□□□ -0.42
SPARC-202ENST00000520687 ANKRD44Q8N8A2 993 aa12.44□□□□□ -0.42
SPARC-202ENST00000520687 IL17REQ8NFR9 667 aa12.44□□□□□ -0.42
SPARC-202ENST00000520687 USP35Q9P2H5 1018 aa12.44□□□□□ -0.42
SPARC-202ENST00000520687 BMP2KLQ5H9B9 411 aa12.43□□□□□ -0.42
SPARC-202ENST00000520687 FAM182BQ5T319 152 aa12.43□□□□□ -0.42
SPARC-202ENST00000520687 NBPF6Q5VWK0 638 aa12.43□□□□□ -0.42
SPARC-202ENST00000520687 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
SPARC-202ENST00000520687 LTV1Q96GA3 475 aaPredicted RBP12.43□□□□□ -0.42
SPARC-202ENST00000520687 NBPF4Q96M43 638 aa12.43□□□□□ -0.42
SPARC-202ENST00000520687 DCTPP1Q9H773 170 aa12.43□□□□□ -0.42
SPARC-202ENST00000520687 ABCC6O95255 1503 aa12.43□□□□□ -0.42
SPARC-202ENST00000520687 TRIM37O94972 964 aa12.43□□□□□ -0.42
SPARC-202ENST00000520687 DEKP35659 375 aaKnown RBP12.43□□□□□ -0.42
SPARC-202ENST00000520687 VIRMAQ69YN4 1812 aaKnown RBP12.43□□□□□ -0.42
SPARC-202ENST00000520687 GNAI3P08754 354 aa12.42□□□□□ -0.42
SPARC-202ENST00000520687 TBC1D32Q96NH3 1257 aa12.42□□□□□ -0.42
SPARC-202ENST00000520687 CRYBG1Q9Y4K1 1723 aa12.42□□□□□ -0.42
SPARC-202ENST00000520687 HSPA6P17066 643 aa12.41□□□□□ -0.42
SPARC-202ENST00000520687 XPCQ01831 940 aaPredicted RBP12.41□□□□□ -0.42
SPARC-202ENST00000520687 C1orf141Q5JVX7 400 aa12.41□□□□□ -0.42
SPARC-202ENST00000520687 ANKRD45Q5TZF3 282 aa12.41□□□□□ -0.42
SPARC-202ENST00000520687 ANKRD24Q8TF21 1146 aa12.41□□□□□ -0.42
SPARC-202ENST00000520687 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.41□□□□□ -0.42
SPARC-202ENST00000520687 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
SPARC-202ENST00000520687 SIRT2Q8IXJ6 389 aa12.4□□□□□ -0.42
SPARC-202ENST00000520687 SPATA31A3Q5VYP0 1347 aa12.4□□□□□ -0.42
SPARC-202ENST00000520687 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.42
SPARC-202ENST00000520687 FAM208AQ9UK61 1670 aaKnown RBP12.4□□□□□ -0.42
SPARC-202ENST00000520687 CAPN15O75808 1086 aa12.39□□□□□ -0.43
SPARC-202ENST00000520687 TEFQ10587 303 aa12.39□□□□□ -0.43
SPARC-202ENST00000520687 ZNF530Q6P9A1 599 aaPredicted RBP12.39□□□□□ -0.43
SPARC-202ENST00000520687 SYT17Q9BSW7 474 aa12.39□□□□□ -0.43
SPARC-202ENST00000520687 MIS18AQ9NYP9 233 aa12.39□□□□□ -0.43
SPARC-202ENST00000520687 THSD7AQ9UPZ6 1657 aa12.39□□□□□ -0.43
SPARC-202ENST00000520687 UTRNP46939 3433 aa12.39□□□□□ -0.43
SPARC-202ENST00000520687 FLIIQ13045 1269 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms