RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 MTFR1LQ9H019 292 aa11.09□□□□□ -0.63
CTNNA1-223ENST00000520520 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
CTNNA1-223ENST00000520520 ERBB3P21860 1342 aa11.09□□□□□ -0.63
CTNNA1-223ENST00000520520 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
CTNNA1-223ENST00000520520 BTAF1O14981 1849 aa11.08□□□□□ -0.64
CTNNA1-223ENST00000520520 SENP3-EIF4A1A0A087X0R7 540 aa11.08□□□□□ -0.64
CTNNA1-223ENST00000520520 KCNQ4P56696 695 aa11.08□□□□□ -0.64
CTNNA1-223ENST00000520520 ZNF827Q17R98 1081 aa11.08□□□□□ -0.64
CTNNA1-223ENST00000520520 ZNF784Q8NCA9 323 aaPredicted RBP11.08□□□□□ -0.64
CTNNA1-223ENST00000520520 SLC12A5Q9H2X9 1139 aa11.08□□□□□ -0.64
CTNNA1-223ENST00000520520 BCL9O00512 1426 aa11.08□□□□□ -0.64
CTNNA1-223ENST00000520520 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
CTNNA1-223ENST00000520520 NEFMP07197 916 aa11.07□□□□□ -0.64
CTNNA1-223ENST00000520520 SLFN5Q08AF3 891 aa11.07□□□□□ -0.64
CTNNA1-223ENST00000520520 IFNLR1Q8IU57 520 aaPredicted RBP11.07□□□□□ -0.64
CTNNA1-223ENST00000520520 ARXQ96QS3 562 aa11.07□□□□□ -0.64
CTNNA1-223ENST00000520520 ABCC6O95255 1503 aa11.07□□□□□ -0.64
CTNNA1-223ENST00000520520 NSD2O96028 1365 aa11.06□□□□□ -0.64
CTNNA1-223ENST00000520520 GPR162Q16538 588 aa11.06□□□□□ -0.64
CTNNA1-223ENST00000520520 PLIN1O60240 522 aa11.05□□□□□ -0.64
CTNNA1-223ENST00000520520 PDE3AQ14432 1141 aa11.05□□□□□ -0.64
CTNNA1-223ENST00000520520 LRRC4BQ9NT99 713 aa11.05□□□□□ -0.64
CTNNA1-223ENST00000520520 CD163L1Q9NR16 1453 aa11.05□□□□□ -0.64
CTNNA1-223ENST00000520520 GOLGB1Q14789 3259 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-223ENST00000520520 A0A1W2PP64 1363 aa11.04□□□□□ -0.64
CTNNA1-223ENST00000520520 FBLN1P23142 703 aa11.04□□□□□ -0.64
CTNNA1-223ENST00000520520 CANXP27824 592 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-223ENST00000520520 TRMT2AQ8IZ69 625 aaKnown RBP11.04□□□□□ -0.64
CTNNA1-223ENST00000520520 TERF2IPQ9NYB0 399 aa11.04□□□□□ -0.64
CTNNA1-223ENST00000520520 USP31Q70CQ4 1352 aa11.03□□□□□ -0.64
CTNNA1-223ENST00000520520 PAPPAQ13219 1627 aa11.03□□□□□ -0.64
CTNNA1-223ENST00000520520 PRR29P0C7W0 189 aa11.03□□□□□ -0.64
CTNNA1-223ENST00000520520 CFAP53Q96M91 514 aa11.03□□□□□ -0.64
CTNNA1-223ENST00000520520 SGIP1Q9BQI5 828 aa11.03□□□□□ -0.64
CTNNA1-223ENST00000520520 TFCP2L1Q9NZI6 479 aa11.03□□□□□ -0.64
CTNNA1-223ENST00000520520 EDC4Q6P2E9 1401 aaKnown RBP11.02□□□□□ -0.64
CTNNA1-223ENST00000520520 POLD1P28340 1107 aa11.02□□□□□ -0.65
CTNNA1-223ENST00000520520 AMPHP49418 695 aa11.02□□□□□ -0.65
CTNNA1-223ENST00000520520 PRIM1P49642 420 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-223ENST00000520520 PUS7Q96PZ0 661 aaKnown RBP11.02□□□□□ -0.65
CTNNA1-223ENST00000520520 CHD4Q14839 1912 aa11.01□□□□□ -0.65
CTNNA1-223ENST00000520520 USP54Q70EL1 1684 aa11.01□□□□□ -0.65
CTNNA1-223ENST00000520520 NSD3Q9BZ95 1437 aa11.01□□□□□ -0.65
CTNNA1-223ENST00000520520 DOT1LQ8TEK3 1739 aa11.01□□□□□ -0.65
CTNNA1-223ENST00000520520 RGPD2P0DJD1 1756 aa11.01□□□□□ -0.65
CTNNA1-223ENST00000520520 USHBP1Q8N6Y0 703 aa11.01□□□□□ -0.65
CTNNA1-223ENST00000520520 COG3Q96JB2 828 aa11.01□□□□□ -0.65
CTNNA1-223ENST00000520520 LAS1LQ9Y4W2 734 aaKnown RBP11.01□□□□□ -0.65
CTNNA1-223ENST00000520520 BECN1Q14457 450 aa11□□□□□ -0.65
CTNNA1-223ENST00000520520 MSL1Q68DK7 614 aa11□□□□□ -0.65
CTNNA1-223ENST00000520520 NLGN2Q8NFZ4 835 aa11□□□□□ -0.65
CTNNA1-223ENST00000520520 IP6K1Q92551 441 aa11□□□□□ -0.65
CTNNA1-223ENST00000520520 CREBZFQ9NS37 354 aa11□□□□□ -0.65
CTNNA1-223ENST00000520520 PNPLA7Q6ZV29 1317 aa11□□□□□ -0.65
CTNNA1-223ENST00000520520 TUBGCP6Q96RT7 1819 aa11□□□□□ -0.65
CTNNA1-223ENST00000520520 APAF1O14727 1248 aa10.99□□□□□ -0.65
CTNNA1-223ENST00000520520 HOXC9P31274 260 aa10.99□□□□□ -0.65
CTNNA1-223ENST00000520520 RRS1Q15050 365 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-223ENST00000520520 C20orf194Q5TEA3 1177 aa10.99□□□□□ -0.65
CTNNA1-223ENST00000520520 RUNDC1Q96C34 613 aa10.99□□□□□ -0.65
CTNNA1-223ENST00000520520 UPF2Q9HAU5 1272 aaKnown RBP10.99□□□□□ -0.65
CTNNA1-223ENST00000520520 CCNL1Q9UK58 526 aaPredicted RBP10.99□□□□□ -0.65
CTNNA1-223ENST00000520520 MAP3K19Q56UN5 1328 aa10.99□□□□□ -0.65
CTNNA1-223ENST00000520520 FAM208AQ9UK61 1670 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-223ENST00000520520 C1QTNF8P60827 252 aa10.98□□□□□ -0.65
CTNNA1-223ENST00000520520 SLC27A3Q5K4L6 730 aa10.98□□□□□ -0.65
CTNNA1-223ENST00000520520 MORC1Q86VD1 984 aa10.98□□□□□ -0.65
CTNNA1-223ENST00000520520 CCDC146Q8IYE0 955 aa10.98□□□□□ -0.65
CTNNA1-223ENST00000520520 ZCRB1Q8TBF4 217 aaKnown RBP10.98□□□□□ -0.65
CTNNA1-223ENST00000520520 MYH16Q9H6N6 1097 aa10.98□□□□□ -0.65
CTNNA1-223ENST00000520520 CT47B1P0C2W7 299 aaPredicted RBP10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 CCDC27Q2M243 656 aa10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 C8orf34Q49A92 452 aa10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 WDR63Q8IWG1 891 aa10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 CLUAP1Q96AJ1 413 aa10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 GGNBP2Q9H3C7 697 aa10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 WWC3Q9ULE0 1092 aa10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 ANKRD36BQ8N2N9 1353 aa10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 MEGF6O75095 1541 aa10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 ANKRD26Q9UPS8 1709 aa10.97□□□□□ -0.65
CTNNA1-223ENST00000520520 GIGYF1O75420 1035 aaPredicted RBP10.96□□□□□ -0.65
CTNNA1-223ENST00000520520 PLCD3Q8N3E9 789 aa10.96□□□□□ -0.65
CTNNA1-223ENST00000520520 SLC16A10Q8TF71 515 aa10.96□□□□□ -0.65
CTNNA1-223ENST00000520520 SHANK3Q9BYB0 1731 aa10.95□□□□□ -0.66
CTNNA1-223ENST00000520520 MAP3K5Q99683 1374 aa10.95□□□□□ -0.66
CTNNA1-223ENST00000520520 NBPF6Q5VWK0 638 aa10.95□□□□□ -0.66
CTNNA1-223ENST00000520520 CHRDL2Q6WN34 429 aa10.95□□□□□ -0.66
CTNNA1-223ENST00000520520 NBPF4Q96M43 638 aa10.95□□□□□ -0.66
CTNNA1-223ENST00000520520 QSER1Q2KHR3 1735 aa10.95□□□□□ -0.66
CTNNA1-223ENST00000520520 RGS3P49796 1198 aa10.94□□□□□ -0.66
CTNNA1-223ENST00000520520 MNX1P50219 401 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-223ENST00000520520 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.663e-10■■■■■ 41
CTNNA1-223ENST00000520520 GSE1Q14687 1217 aa10.94□□□□□ -0.66
CTNNA1-223ENST00000520520 COL23A1Q86Y22 540 aaPredicted RBP10.94□□□□□ -0.66
CTNNA1-223ENST00000520520 WWC1Q8IX03 1113 aa10.94□□□□□ -0.66
CTNNA1-223ENST00000520520 RAPGEF4Q8WZA2 1011 aa10.94□□□□□ -0.66
CTNNA1-223ENST00000520520 LY75O60449 1722 aa10.94□□□□□ -0.66
CTNNA1-223ENST00000520520 PHF14O94880 888 aa10.93□□□□□ -0.66
CTNNA1-223ENST00000520520 YBX3P16989 372 aaKnown RBP eCLIP10.93□□□□□ -0.665e-8■□□□□ 8.9
CTNNA1-223ENST00000520520 TATP17735 454 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms