RNA–Protein interactions for RNA: ENST00000520276.5

TRPS1-211, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2 BASIC

Gene TRPS1, Length 4,083 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-211ENST00000520276 PDE3AQ14432 1141 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 RBSNQ9H1K0 784 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 LMOD3Q0VAK6 560 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 ZKSCAN5Q9Y2L8 839 aa12.43□□□□□ -0.42
TRPS1-211ENST00000520276 DDX49Q9Y6V7 483 aaKnown RBP12.43□□□□□ -0.42
TRPS1-211ENST00000520276 SSFA2P28290 1259 aa12.42□□□□□ -0.42
TRPS1-211ENST00000520276 DDB1Q16531 1140 aa12.42□□□□□ -0.42
TRPS1-211ENST00000520276 FAM98CQ17RN3 349 aaKnown RBP12.42□□□□□ -0.42
TRPS1-211ENST00000520276 CD2BP2O95400 341 aaKnown RBP12.42□□□□□ -0.42
TRPS1-211ENST00000520276 CPSF1Q10570 1443 aaKnown RBP12.42□□□□□ -0.42
TRPS1-211ENST00000520276 ZNF530Q6P9A1 599 aaPredicted RBP12.42□□□□□ -0.42
TRPS1-211ENST00000520276 TCP11L2Q8N4U5 519 aa12.42□□□□□ -0.42
TRPS1-211ENST00000520276 IPO4Q8TEX9 1081 aaKnown RBP12.42□□□□□ -0.42
TRPS1-211ENST00000520276 PRKAR2BP31323 418 aa12.41□□□□□ -0.42
TRPS1-211ENST00000520276 SMC5Q8IY18 1101 aa12.41□□□□□ -0.42
TRPS1-211ENST00000520276 GAS2L2Q8NHY3 880 aa12.41□□□□□ -0.42
TRPS1-211ENST00000520276 PDLIM2Q96JY6 352 aa12.41□□□□□ -0.42
TRPS1-211ENST00000520276 CDCA7Q9BWT1 371 aaPredicted RBP12.41□□□□□ -0.42
TRPS1-211ENST00000520276 KIF20AO95235 890 aa12.41□□□□□ -0.42
TRPS1-211ENST00000520276 HSP90AB1P08238 724 aaKnown RBP12.41□□□□□ -0.42
TRPS1-211ENST00000520276 IL2RBP14784 551 aa12.41□□□□□ -0.42
TRPS1-211ENST00000520276 HS1BP3Q53T59 392 aa12.41□□□□□ -0.42
TRPS1-211ENST00000520276 LARP1Q6PKG0 1096 aaKnown RBP12.4□□□□□ -0.42
TRPS1-211ENST00000520276 NCLP19338 710 aaKnown RBP12.4□□□□□ -0.42
TRPS1-211ENST00000520276 GTPBP4Q9BZE4 634 aaKnown RBP12.4□□□□□ -0.42
TRPS1-211ENST00000520276 SPDYE4A6NLX3 237 aa12.4□□□□□ -0.42
TRPS1-211ENST00000520276 CAVIN1Q6NZI2 390 aaKnown RBP12.4□□□□□ -0.42
TRPS1-211ENST00000520276 BCL2L13Q9BXK5 485 aa12.4□□□□□ -0.42
TRPS1-211ENST00000520276 MAPK8IP2Q13387 824 aaPredicted RBP12.39□□□□□ -0.43
TRPS1-211ENST00000520276 EIF4A2Q14240 407 aaKnown RBP12.39□□□□□ -0.43
TRPS1-211ENST00000520276 KLHL40Q2TBA0 621 aa12.39□□□□□ -0.43
TRPS1-211ENST00000520276 AMOTQ4VCS5 1084 aa12.39□□□□□ -0.43
TRPS1-211ENST00000520276 NPC1L1Q9UHC9 1359 aa12.39□□□□□ -0.43
TRPS1-211ENST00000520276 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
TRPS1-211ENST00000520276 NALCNQ8IZF0 1738 aa12.38□□□□□ -0.43
TRPS1-211ENST00000520276 RBM6P78332 1123 aaKnown RBP12.38□□□□□ -0.43
TRPS1-211ENST00000520276 CSPP1Q1MSJ5 1256 aa12.38□□□□□ -0.43
TRPS1-211ENST00000520276 PAXIP1Q6ZW49 1069 aaPredicted RBP12.38□□□□□ -0.43
TRPS1-211ENST00000520276 USP31Q70CQ4 1352 aa12.38□□□□□ -0.43
TRPS1-211ENST00000520276 ZSCAN23Q3MJ62 389 aa12.38□□□□□ -0.43
TRPS1-211ENST00000520276 ZCRB1Q8TBF4 217 aaKnown RBP12.38□□□□□ -0.43
TRPS1-211ENST00000520276 ADGRB2O60241 1585 aa12.38□□□□□ -0.43
TRPS1-211ENST00000520276 FCHSD2O94868 740 aa12.38□□□□□ -0.43
TRPS1-211ENST00000520276 LETM1O95202 739 aaPredicted RBP12.38□□□□□ -0.43
TRPS1-211ENST00000520276 RRP7AQ9Y3A4 280 aaKnown RBP12.38□□□□□ -0.43
TRPS1-211ENST00000520276 KIF1AQ12756 1690 aa12.38□□□□□ -0.43
TRPS1-211ENST00000520276 ITSN1Q15811 1721 aa12.38□□□□□ -0.43
TRPS1-211ENST00000520276 AK9Q5TCS8 1911 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 TTC5Q8N0Z6 440 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 RUNDC1Q96C34 613 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 CGNQ9P2M7 1197 aaKnown RBP12.37□□□□□ -0.43
TRPS1-211ENST00000520276 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
TRPS1-211ENST00000520276 E9PSI1 815 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 EYA1Q99502 592 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 FMN2Q9NZ56 1722 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 ROBO1Q9Y6N7 1651 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 IBTKQ9P2D0 1353 aaPredicted RBP12.37□□□□□ -0.43
TRPS1-211ENST00000520276 WDR17Q8IZU2 1322 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 ZNF445P59923 1031 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 MPNDQ8N594 471 aa12.37□□□□□ -0.43
TRPS1-211ENST00000520276 BAG4O95429 457 aaKnown RBP12.36□□□□□ -0.43
TRPS1-211ENST00000520276 MYRIPQ8NFW9 859 aa12.36□□□□□ -0.43
TRPS1-211ENST00000520276 RBM42Q9BTD8 480 aaKnown RBP12.36□□□□□ -0.43
TRPS1-211ENST00000520276 KAT6BQ8WYB5 2073 aa12.36□□□□□ -0.43
TRPS1-211ENST00000520276 CARD10Q9BWT7 1032 aa12.36□□□□□ -0.43
TRPS1-211ENST00000520276 SNX21Q969T3 373 aa12.36□□□□□ -0.43
TRPS1-211ENST00000520276 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
TRPS1-211ENST00000520276 AATKQ6ZMQ8 1374 aa12.35□□□□□ -0.43
TRPS1-211ENST00000520276 CABP4P57796 275 aa12.35□□□□□ -0.43
TRPS1-211ENST00000520276 GJD4Q96KN9 370 aaPredicted RBP12.35□□□□□ -0.43
TRPS1-211ENST00000520276 SETD1AO15047 1707 aaKnown RBP12.35□□□□□ -0.43
TRPS1-211ENST00000520276 IFNL2Q8IZJ0 200 aa12.35□□□□□ -0.43
TRPS1-211ENST00000520276 MCTP1Q6DN14 999 aa12.35□□□□□ -0.43
TRPS1-211ENST00000520276 KIF2CQ99661 725 aa12.35□□□□□ -0.43
TRPS1-211ENST00000520276 DNTTIP2Q5QJE6 756 aaKnown RBP12.34□□□□□ -0.43
TRPS1-211ENST00000520276 RWDD1Q9H446 243 aaPredicted RBP12.34□□□□□ -0.43
TRPS1-211ENST00000520276 ERBB3P21860 1342 aa12.34□□□□□ -0.43
TRPS1-211ENST00000520276 NBPF6Q5VWK0 638 aa12.34□□□□□ -0.43
TRPS1-211ENST00000520276 NBPF4Q96M43 638 aa12.34□□□□□ -0.43
TRPS1-211ENST00000520276 PHLPP1O60346 1717 aa12.34□□□□□ -0.43
TRPS1-211ENST00000520276 RBM25P49756 843 aaKnown RBP12.34□□□□□ -0.43
TRPS1-211ENST00000520276 STRCP1A6NGW2 1772 aa12.33□□□□□ -0.43
TRPS1-211ENST00000520276 RTL1A6NKG5 1358 aa12.33□□□□□ -0.44
TRPS1-211ENST00000520276 GOLGA6L22H0YM25 854 aa12.33□□□□□ -0.44
TRPS1-211ENST00000520276 VPS72Q15906 364 aa12.33□□□□□ -0.44
TRPS1-211ENST00000520276 SEPT12Q8IYM1 358 aa12.33□□□□□ -0.44
TRPS1-211ENST00000520276 AXIN2Q9Y2T1 843 aa12.33□□□□□ -0.44
TRPS1-211ENST00000520276 KIF24Q5T7B8 1368 aa12.33□□□□□ -0.44
TRPS1-211ENST00000520276 PTMSP20962 102 aa12.33□□□□□ -0.44
TRPS1-211ENST00000520276 ZNF330Q9Y3S2 320 aaPredicted RBP12.33□□□□□ -0.44
TRPS1-211ENST00000520276 THRAP3Q9Y2W1 955 aaKnown RBP12.32□□□□□ -0.44
TRPS1-211ENST00000520276 RARSP54136 660 aaKnown RBP12.32□□□□□ -0.44
TRPS1-211ENST00000520276 C17orf53Q8N3J3 647 aaPredicted RBP12.32□□□□□ -0.44
TRPS1-211ENST00000520276 RNF214Q8ND24 703 aa12.32□□□□□ -0.44
TRPS1-211ENST00000520276 CHAMP1Q96JM3 812 aa12.32□□□□□ -0.44
TRPS1-211ENST00000520276 MCM5P33992 734 aa12.32□□□□□ -0.44
TRPS1-211ENST00000520276 PKP1Q13835 747 aa12.32□□□□□ -0.44
TRPS1-211ENST00000520276 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
TRPS1-211ENST00000520276 MPRIPQ6WCQ1 1025 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms