RNA–Protein interactions for RNA: ENST00000519894.1

FBXO28-204, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-204ENST00000519894 ASAP1Q9ULH1 1129 aa20.21■□□□□ 0.83
FBXO28-204ENST00000519894 C5P01031 1676 aa20.2■□□□□ 0.82
FBXO28-204ENST00000519894 ERVV-2B6SEH9 535 aa20.2■□□□□ 0.82
FBXO28-204ENST00000519894 HMOX1P09601 288 aa20.2■□□□□ 0.82
FBXO28-204ENST00000519894 TAF1LQ8IZX4 1826 aa20.2■□□□□ 0.82
FBXO28-204ENST00000519894 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
FBXO28-204ENST00000519894 SLC16A10Q8TF71 515 aa20.19■□□□□ 0.82
FBXO28-204ENST00000519894 ATG3Q9NT62 314 aa20.19■□□□□ 0.82
FBXO28-204ENST00000519894 COL3A1P02461 1466 aaPredicted RBP20.18■□□□□ 0.82
FBXO28-204ENST00000519894 LOC102724428A0A0B4J2F2 783 aa20.18■□□□□ 0.82
FBXO28-204ENST00000519894 SIK1P57059 783 aa20.18■□□□□ 0.82
FBXO28-204ENST00000519894 C1orf141Q5JVX7 400 aa20.18■□□□□ 0.82
FBXO28-204ENST00000519894 HMGB2P26583 209 aaKnown RBP20.17■□□□□ 0.82
FBXO28-204ENST00000519894 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
FBXO28-204ENST00000519894 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
FBXO28-204ENST00000519894 CABP4P57796 275 aa20.15■□□□□ 0.82
FBXO28-204ENST00000519894 C4BP0C0L5 1744 aa20.15■□□□□ 0.82
FBXO28-204ENST00000519894 COL24A1Q17RW2 1714 aa20.14■□□□□ 0.81
FBXO28-204ENST00000519894 ITPK1Q13572 414 aa20.14■□□□□ 0.81
FBXO28-204ENST00000519894 AKAP4Q5JQC9 854 aa20.14■□□□□ 0.81
FBXO28-204ENST00000519894 LINC00116Q8NCU8 138 aa20.14■□□□□ 0.81
FBXO28-204ENST00000519894 PPP2R1AP30153 589 aa20.13■□□□□ 0.81
FBXO28-204ENST00000519894 ATP6V1AP38606 617 aa20.13■□□□□ 0.81
FBXO28-204ENST00000519894 MTHFSDQ2M296 383 aaKnown RBP20.13■□□□□ 0.81
FBXO28-204ENST00000519894 ARXQ96QS3 562 aa20.13■□□□□ 0.81
FBXO28-204ENST00000519894 U2SURPO15042 1029 aaKnown RBP20.12■□□□□ 0.81
FBXO28-204ENST00000519894 KCNA4P22459 653 aa20.12■□□□□ 0.81
FBXO28-204ENST00000519894 AMIGO3Q86WK7 504 aa20.12■□□□□ 0.81
FBXO28-204ENST00000519894 NFATC2IPQ8NCF5 419 aa20.12■□□□□ 0.81
FBXO28-204ENST00000519894 SLC4A9Q96Q91 983 aa20.12■□□□□ 0.81
FBXO28-204ENST00000519894 SYT17Q9BSW7 474 aa20.12■□□□□ 0.81
FBXO28-204ENST00000519894 FHDC1Q9C0D6 1143 aaPredicted RBP20.12■□□□□ 0.81
FBXO28-204ENST00000519894 SCN11AQ9UI33 1791 aa20.11■□□□□ 0.81
FBXO28-204ENST00000519894 AK7Q96M32 723 aa20.11■□□□□ 0.81
FBXO28-204ENST00000519894 LGR6Q9HBX8 967 aa20.11■□□□□ 0.81
FBXO28-204ENST00000519894 SMIM5Q71RC9 77 aa20.1■□□□□ 0.81
FBXO28-204ENST00000519894 FLAD1Q8NFF5 587 aa20.1■□□□□ 0.81
FBXO28-204ENST00000519894 CFAP53Q96M91 514 aa20.1■□□□□ 0.81
FBXO28-204ENST00000519894 UBR3Q6ZT12 1888 aa20.09■□□□□ 0.81
FBXO28-204ENST00000519894 POLD1P28340 1107 aa20.09■□□□□ 0.81
FBXO28-204ENST00000519894 SAMD1Q6SPF0 538 aaPredicted RBP20.09■□□□□ 0.81
FBXO28-204ENST00000519894 RNMTO43148 476 aaKnown RBP20.08■□□□□ 0.81
FBXO28-204ENST00000519894 ZNF831Q5JPB2 1677 aa20.07■□□□□ 0.8
FBXO28-204ENST00000519894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.06■□□□□ 0.8
FBXO28-204ENST00000519894 PHF14O94880 888 aa20.06■□□□□ 0.8
FBXO28-204ENST00000519894 MSL1Q68DK7 614 aa20.06■□□□□ 0.8
FBXO28-204ENST00000519894 CHRDL2Q6WN34 429 aa20.06■□□□□ 0.8
FBXO28-204ENST00000519894 SLC52A2Q9HAB3 445 aa20.06■□□□□ 0.8
FBXO28-204ENST00000519894 VIRMAQ69YN4 1812 aaKnown RBP20.05■□□□□ 0.8
FBXO28-204ENST00000519894 GNPATO15228 680 aa20.05■□□□□ 0.8
FBXO28-204ENST00000519894 SSFA2P28290 1259 aa20.05■□□□□ 0.8
FBXO28-204ENST00000519894 MAP3K5Q99683 1374 aa20.05■□□□□ 0.8
FBXO28-204ENST00000519894 ADAMTS7Q9UKP4 1686 aa20.04■□□□□ 0.8
FBXO28-204ENST00000519894 PTCD1O75127 700 aaKnown RBP20.04■□□□□ 0.8
FBXO28-204ENST00000519894 RSPH6AQ9H0K4 717 aa20.04■□□□□ 0.8
FBXO28-204ENST00000519894 NUDCQ9Y266 331 aa20.04■□□□□ 0.8
FBXO28-204ENST00000519894 RC3H1Q5TC82 1133 aaKnown RBP20.03■□□□□ 0.8
FBXO28-204ENST00000519894 MRC1P22897 1456 aa20.03■□□□□ 0.8
FBXO28-204ENST00000519894 COL5A3P25940 1745 aaPredicted RBP20.02■□□□□ 0.8
FBXO28-204ENST00000519894 PRKAR2BP31323 418 aa20.02■□□□□ 0.8
FBXO28-204ENST00000519894 GAS2L2Q8NHY3 880 aa20.02■□□□□ 0.8
FBXO28-204ENST00000519894 PHACTR3Q96KR7 559 aa20.02■□□□□ 0.8
FBXO28-204ENST00000519894 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
FBXO28-204ENST00000519894 KLHL34Q8N239 644 aa20.01■□□□□ 0.79
FBXO28-204ENST00000519894 CNTNAP4Q9C0A0 1308 aa20.01■□□□□ 0.79
FBXO28-204ENST00000519894 U2AF1L5P0DN76 240 aaPredicted RBP20■□□□□ 0.79
FBXO28-204ENST00000519894 U2AF1Q01081 240 aaKnown RBP eCLIP20■□□□□ 0.79
FBXO28-204ENST00000519894 IL17REQ8NFR9 667 aa20■□□□□ 0.79
FBXO28-204ENST00000519894 RTCBQ9Y3I0 505 aaKnown RBP20■□□□□ 0.79
FBXO28-204ENST00000519894 GNAT3A8MTJ3 354 aa19.99■□□□□ 0.79
FBXO28-204ENST00000519894 RPS6KA4O75676 772 aa19.99■□□□□ 0.79
FBXO28-204ENST00000519894 DDX10Q13206 875 aaKnown RBP19.99■□□□□ 0.79
FBXO28-204ENST00000519894 MYH14Q7Z406 1995 aaKnown RBP19.99■□□□□ 0.79
FBXO28-204ENST00000519894 TJP1Q07157 1748 aa19.99■□□□□ 0.79
FBXO28-204ENST00000519894 FCHSD2O94868 740 aa19.98■□□□□ 0.79
FBXO28-204ENST00000519894 TRAPPC3LQ5T215 181 aa19.98■□□□□ 0.79
FBXO28-204ENST00000519894 NLGN2Q8NFZ4 835 aa19.97■□□□□ 0.79
FBXO28-204ENST00000519894 ARHGEF1Q92888 912 aaKnown RBP19.97■□□□□ 0.79
FBXO28-204ENST00000519894 CICQ96RK0 1608 aaPredicted RBP19.97■□□□□ 0.79
FBXO28-204ENST00000519894 CRKLP46109 303 aaKnown RBP19.96■□□□□ 0.79
FBXO28-204ENST00000519894 DNAJC10Q8IXB1 793 aa19.96■□□□□ 0.79
FBXO28-204ENST00000519894 KCPQ6ZWJ8 1503 aa19.96■□□□□ 0.79
FBXO28-204ENST00000519894 INTS5Q6P9B9 1019 aaKnown RBP19.94■□□□□ 0.78
FBXO28-204ENST00000519894 CEMIPQ8WUJ3 1361 aa19.94■□□□□ 0.78
FBXO28-204ENST00000519894 TEFQ10587 303 aa19.93■□□□□ 0.78
FBXO28-204ENST00000519894 RALBP1Q15311 655 aa19.93■□□□□ 0.78
FBXO28-204ENST00000519894 SIPA1L3O60292 1781 aaPredicted RBP19.93■□□□□ 0.78
FBXO28-204ENST00000519894 CYP19A1P11511 503 aaPredicted RBP19.92■□□□□ 0.78
FBXO28-204ENST00000519894 VSIG10Q8N0Z9 540 aa19.92■□□□□ 0.78
FBXO28-204ENST00000519894 CD2APQ9Y5K6 639 aa19.92■□□□□ 0.78
FBXO28-204ENST00000519894 UBR2Q8IWV8 1755 aa19.91■□□□□ 0.78
FBXO28-204ENST00000519894 YY1P25490 414 aa19.91■□□□□ 0.78
FBXO28-204ENST00000519894 RFC4P35249 363 aa19.91■□□□□ 0.78
FBXO28-204ENST00000519894 GYS1P13807 737 aa19.9■□□□□ 0.78
FBXO28-204ENST00000519894 GPR162Q16538 588 aa19.9■□□□□ 0.78
FBXO28-204ENST00000519894 ZNF790Q6PG37 636 aa19.9■□□□□ 0.78
FBXO28-204ENST00000519894 TTC5Q8N0Z6 440 aa19.9■□□□□ 0.78
FBXO28-204ENST00000519894 NLGN1Q8N2Q7 840 aa19.9■□□□□ 0.78
FBXO28-204ENST00000519894 CCDC87Q9NVE4 849 aa19.9■□□□□ 0.78
FBXO28-204ENST00000519894 C4AP0C0L4 1744 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms