RNA–Protein interactions for RNA: ENST00000519848.1

PABPC1-213, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 676 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-213ENST00000519848 SNPHO15079 494 aa12.19□□□□□ -0.46
PABPC1-213ENST00000519848 PTGER2P43116 358 aa12.19□□□□□ -0.46
PABPC1-213ENST00000519848 NBPF6Q5VWK0 638 aa12.19□□□□□ -0.46
PABPC1-213ENST00000519848 NBPF4Q96M43 638 aa12.19□□□□□ -0.46
PABPC1-213ENST00000519848 CDCA7Q9BWT1 371 aaPredicted RBP12.19□□□□□ -0.46
PABPC1-213ENST00000519848 RTL1A6NKG5 1358 aa12.18□□□□□ -0.46
PABPC1-213ENST00000519848 EXOC5O00471 708 aa12.18□□□□□ -0.46
PABPC1-213ENST00000519848 ZBTB7AO95365 584 aa12.18□□□□□ -0.46
PABPC1-213ENST00000519848 ITGB4P16144 1822 aa12.18□□□□□ -0.46
PABPC1-213ENST00000519848 MAP2P11137 1827 aaKnown RBP12.17□□□□□ -0.46
PABPC1-213ENST00000519848 TAF1LQ8IZX4 1826 aa12.17□□□□□ -0.46
PABPC1-213ENST00000519848 NUBP1P53384 320 aa12.17□□□□□ -0.46
PABPC1-213ENST00000519848 HSP90AB2PQ58FF8 381 aa12.17□□□□□ -0.46
PABPC1-213ENST00000519848 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
PABPC1-213ENST00000519848 COG3Q96JB2 828 aa12.16□□□□□ -0.46
PABPC1-213ENST00000519848 C5P01031 1676 aa12.16□□□□□ -0.46
PABPC1-213ENST00000519848 C11orf95C9JLR9 678 aaPredicted RBP12.15□□□□□ -0.46
PABPC1-213ENST00000519848 TMF1P82094 1093 aa12.15□□□□□ -0.46
PABPC1-213ENST00000519848 PCGF6Q9BYE7 350 aa12.15□□□□□ -0.46
PABPC1-213ENST00000519848 KRTAP3-3Q9BYR6 98 aa12.15□□□□□ -0.46
PABPC1-213ENST00000519848 KRTAP3-2Q9BYR7 98 aa12.15□□□□□ -0.46
PABPC1-213ENST00000519848 OCEL1Q9H607 264 aa12.15□□□□□ -0.46
PABPC1-213ENST00000519848 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
PABPC1-213ENST00000519848 DDX54Q8TDD1 881 aaKnown RBP12.14□□□□□ -0.47
PABPC1-213ENST00000519848 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.14□□□□□ -0.47
PABPC1-213ENST00000519848 INSRP06213 1382 aa12.14□□□□□ -0.47
PABPC1-213ENST00000519848 POTEB3A0JP26 581 aa12.13□□□□□ -0.47
PABPC1-213ENST00000519848 NBPF14Q5TI25 921 aa12.13□□□□□ -0.47
PABPC1-213ENST00000519848 POTEBQ6S5H4 581 aa12.13□□□□□ -0.47
PABPC1-213ENST00000519848 AMIGO3Q86WK7 504 aa12.13□□□□□ -0.47
PABPC1-213ENST00000519848 KAT6BQ8WYB5 2073 aa12.12□□□□□ -0.47
PABPC1-213ENST00000519848 AMPHP49418 695 aa12.12□□□□□ -0.47
PABPC1-213ENST00000519848 SPON1Q9HCB6 807 aa12.12□□□□□ -0.47
PABPC1-213ENST00000519848 FLT4P35916 1363 aa12.12□□□□□ -0.47
PABPC1-213ENST00000519848 PNPLA7Q6ZV29 1317 aa12.11□□□□□ -0.47
PABPC1-213ENST00000519848 CYP27B1O15528 508 aa12.11□□□□□ -0.47
PABPC1-213ENST00000519848 HSPA5P11021 654 aaKnown RBP12.11□□□□□ -0.47
PABPC1-213ENST00000519848 PRIM1P49642 420 aaKnown RBP12.11□□□□□ -0.47
PABPC1-213ENST00000519848 SMIM5Q71RC9 77 aa12.1□□□□□ -0.47
PABPC1-213ENST00000519848 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
PABPC1-213ENST00000519848 SMG6Q86US8 1419 aaKnown RBP12.1□□□□□ -0.47
PABPC1-213ENST00000519848 C4BP0C0L5 1744 aa12.09□□□□□ -0.47
PABPC1-213ENST00000519848 ZCRB1Q8TBF4 217 aaKnown RBP12.08□□□□□ -0.48
PABPC1-213ENST00000519848 FHDC1Q9C0D6 1143 aaPredicted RBP12.08□□□□□ -0.48
PABPC1-213ENST00000519848 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
PABPC1-213ENST00000519848 POLKQ9UBT6 870 aa12.08□□□□□ -0.48
PABPC1-213ENST00000519848 EMP3P54852 163 aa12.07□□□□□ -0.48
PABPC1-213ENST00000519848 CLSPNQ9HAW4 1339 aa12.07□□□□□ -0.48
PABPC1-213ENST00000519848 KIF24Q5T7B8 1368 aa12.06□□□□□ -0.48
PABPC1-213ENST00000519848 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
PABPC1-213ENST00000519848 SYTL4Q96C24 671 aaPredicted RBP12.06□□□□□ -0.48
PABPC1-213ENST00000519848 EYA1Q99502 592 aa12.06□□□□□ -0.48
PABPC1-213ENST00000519848 HS3ST6Q96QI5 342 aa12.05□□□□□ -0.48
PABPC1-213ENST00000519848 MTFR1LQ9H019 292 aa12.05□□□□□ -0.48
PABPC1-213ENST00000519848 COL5A3P25940 1745 aaPredicted RBP12.05□□□□□ -0.48
PABPC1-213ENST00000519848 KIAA1551Q9HCM1 1747 aa12.05□□□□□ -0.48
PABPC1-213ENST00000519848 KDM6AO15550 1401 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-213ENST00000519848 TNNT2P45379 298 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-213ENST00000519848 EIF4A2Q14240 407 aaKnown RBP12.04□□□□□ -0.48
PABPC1-213ENST00000519848 SYT17Q9BSW7 474 aa12.04□□□□□ -0.48
PABPC1-213ENST00000519848 PPP1R1BQ9UD71 204 aaPredicted RBP12.04□□□□□ -0.48
PABPC1-213ENST00000519848 WASHC2AQ641Q2 1341 aa12.04□□□□□ -0.48
PABPC1-213ENST00000519848 PALLDQ8WX93 1383 aa12.04□□□□□ -0.48
PABPC1-213ENST00000519848 NLGN2Q8NFZ4 835 aa12.03□□□□□ -0.48
PABPC1-213ENST00000519848 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
PABPC1-213ENST00000519848 TIMELESSQ9UNS1 1208 aa12.03□□□□□ -0.48
PABPC1-213ENST00000519848 TJP1Q07157 1748 aa12.03□□□□□ -0.48
PABPC1-213ENST00000519848 PPM1GO15355 546 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-213ENST00000519848 COL23A1Q86Y22 540 aaPredicted RBP12.02□□□□□ -0.49
PABPC1-213ENST00000519848 AEBP1Q8IUX7 1158 aa12.02□□□□□ -0.49
PABPC1-213ENST00000519848 FAM212AQ96EL1 285 aa12.02□□□□□ -0.49
PABPC1-213ENST00000519848 PANK3Q9H999 370 aa12.02□□□□□ -0.49
PABPC1-213ENST00000519848 IGSF1Q8N6C5 1336 aa12.02□□□□□ -0.49
PABPC1-213ENST00000519848 PCDH11XQ9BZA7 1347 aa12.02□□□□□ -0.49
PABPC1-213ENST00000519848 PCDH11YQ9BZA8 1340 aa12.02□□□□□ -0.49
PABPC1-213ENST00000519848 C4AP0C0L4 1744 aa12.02□□□□□ -0.49
PABPC1-213ENST00000519848 KDRP35968 1356 aa12.02□□□□□ -0.49
PABPC1-213ENST00000519848 MAP3K5Q99683 1374 aa12.02□□□□□ -0.49
PABPC1-213ENST00000519848 VIRMAQ69YN4 1812 aaKnown RBP12.02□□□□□ -0.49
PABPC1-213ENST00000519848 UTRNP46939 3433 aa12.01□□□□□ -0.49
PABPC1-213ENST00000519848 ADAMTS7Q9UKP4 1686 aa12.01□□□□□ -0.49
PABPC1-213ENST00000519848 TATP17735 454 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-213ENST00000519848 SLC27A3Q5K4L6 730 aa12.01□□□□□ -0.49
PABPC1-213ENST00000519848 MSL1Q68DK7 614 aa12.01□□□□□ -0.49
PABPC1-213ENST00000519848 RAPGEF4Q8WZA2 1011 aa12.01□□□□□ -0.49
PABPC1-213ENST00000519848 PIGBQ92521 554 aa12.01□□□□□ -0.49
PABPC1-213ENST00000519848 CCNL1Q9UK58 526 aaPredicted RBP12.01□□□□□ -0.49
PABPC1-213ENST00000519848 CGNL1Q0VF96 1302 aa12.01□□□□□ -0.49
PABPC1-213ENST00000519848 FAM205CA6NFA0 338 aa12□□□□□ -0.49
PABPC1-213ENST00000519848 ITPK1Q13572 414 aa12□□□□□ -0.49
PABPC1-213ENST00000519848 CDCA8Q53HL2 280 aa12□□□□□ -0.49
PABPC1-213ENST00000519848 PDCD7Q8N8D1 485 aaKnown RBP12□□□□□ -0.49
PABPC1-213ENST00000519848 SLC4A9Q96Q91 983 aa12□□□□□ -0.49
PABPC1-213ENST00000519848 KIF7Q2M1P5 1343 aa12□□□□□ -0.49
PABPC1-213ENST00000519848 YY1P25490 414 aa11.99□□□□□ -0.49
PABPC1-213ENST00000519848 EIF4G2P78344 907 aaKnown RBP eCLIP11.99□□□□□ -0.49
PABPC1-213ENST00000519848 NKX1-1Q15270 411 aaPredicted RBP11.99□□□□□ -0.49
PABPC1-213ENST00000519848 LINC00116Q8NCU8 138 aa11.99□□□□□ -0.49
PABPC1-213ENST00000519848 ARXQ96QS3 562 aa11.99□□□□□ -0.49
PABPC1-213ENST00000519848 ZBTB47Q9UFB7 747 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms