RNA–Protein interactions for RNA: ENST00000519624.1

AC055854.1-202, humanhuman

TSL 3

Gene AC055854.1, Length 292 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055854.1-202ENST00000519624 VEGFBP49765 207 aa7.07□□□□□ -1.28
AC055854.1-202ENST00000519624 SIK1P57059 783 aa7.07□□□□□ -1.28
AC055854.1-202ENST00000519624 AMIGO3Q86WK7 504 aa7.07□□□□□ -1.28
AC055854.1-202ENST00000519624 PKD1L3Q7Z443 1732 aa7.07□□□□□ -1.28
AC055854.1-202ENST00000519624 KIAA1210Q9ULL0 1709 aa7.07□□□□□ -1.28
AC055854.1-202ENST00000519624 FAM208AQ9UK61 1670 aaKnown RBP7.06□□□□□ -1.28
AC055854.1-202ENST00000519624 ATP6V1AP38606 617 aa7.06□□□□□ -1.28
AC055854.1-202ENST00000519624 AMPHP49418 695 aa7.06□□□□□ -1.28
AC055854.1-202ENST00000519624 SMIM5Q71RC9 77 aa7.06□□□□□ -1.28
AC055854.1-202ENST00000519624 HDGFL2Q7Z4V5 671 aaPredicted RBP7.06□□□□□ -1.28
AC055854.1-202ENST00000519624 SMG6Q86US8 1419 aaKnown RBP7.06□□□□□ -1.28
AC055854.1-202ENST00000519624 KDM6AO15550 1401 aaPredicted RBP7.05□□□□□ -1.28
AC055854.1-202ENST00000519624 IQCA1LA6NCM1 817 aa7.05□□□□□ -1.28
AC055854.1-202ENST00000519624 DEFB115Q30KQ5 88 aa7.05□□□□□ -1.28
AC055854.1-202ENST00000519624 PRPF38BQ5VTL8 546 aaKnown RBP7.05□□□□□ -1.28
AC055854.1-202ENST00000519624 NME9Q86XW9 330 aa7.05□□□□□ -1.28
AC055854.1-202ENST00000519624 LINC00116Q8NCU8 138 aa7.05□□□□□ -1.28
AC055854.1-202ENST00000519624 CD163L1Q9NR16 1453 aa7.04□□□□□ -1.28
AC055854.1-202ENST00000519624 KIF13BQ9NQT8 1826 aa7.04□□□□□ -1.28
AC055854.1-202ENST00000519624 GYS1P13807 737 aa7.04□□□□□ -1.28
AC055854.1-202ENST00000519624 HOXC9P31274 260 aa7.04□□□□□ -1.28
AC055854.1-202ENST00000519624 NBPF1Q3BBV0 1214 aa7.04□□□□□ -1.28
AC055854.1-202ENST00000519624 LDHDQ86WU2 507 aa7.04□□□□□ -1.28
AC055854.1-202ENST00000519624 TMOD3Q9NYL9 352 aa7.04□□□□□ -1.28
AC055854.1-202ENST00000519624 MEGF6O75095 1541 aa7.04□□□□□ -1.28
AC055854.1-202ENST00000519624 KAT6BQ8WYB5 2073 aa7.04□□□□□ -1.28
AC055854.1-202ENST00000519624 CA12O43570 354 aa7.03□□□□□ -1.28
AC055854.1-202ENST00000519624 ECE1P42892 770 aa7.03□□□□□ -1.28
AC055854.1-202ENST00000519624 RASSF7Q02833 373 aa7.03□□□□□ -1.28
AC055854.1-202ENST00000519624 PIGBQ92521 554 aa7.03□□□□□ -1.28
AC055854.1-202ENST00000519624 ARHGEF1Q92888 912 aaKnown RBP7.03□□□□□ -1.28
AC055854.1-202ENST00000519624 GCC1Q96CN9 775 aa7.03□□□□□ -1.28
AC055854.1-202ENST00000519624 TERF2IPQ9NYB0 399 aa7.03□□□□□ -1.28
AC055854.1-202ENST00000519624 N4BP2Q86UW6 1770 aaPredicted RBP7.03□□□□□ -1.28
AC055854.1-202ENST00000519624 MAP3K19Q56UN5 1328 aa7.02□□□□□ -1.28
AC055854.1-202ENST00000519624 PASKQ96RG2 1323 aa7.02□□□□□ -1.28
AC055854.1-202ENST00000519624 WDR33Q9C0J8 1336 aaKnown RBP7.02□□□□□ -1.28
AC055854.1-202ENST00000519624 EDC4Q6P2E9 1401 aaKnown RBP7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 C4AP0C0L4 1744 aa7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 KIAA1551Q9HCM1 1747 aa7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 TOGARAM1Q9Y4F4 1720 aa7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 RASSF10A6NK89 507 aa7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 POTECB2RU33 542 aa7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 ERFEQ4G0M1 354 aa7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 RC3H1Q5TC82 1133 aaKnown RBP7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 COG3Q96JB2 828 aa7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 RTL1A6NKG5 1358 aa7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 UBR3Q6ZT12 1888 aa7.02□□□□□ -1.29
AC055854.1-202ENST00000519624 ARFGEF1Q9Y6D6 1849 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 LTN1O94822 1766 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 SBNO2Q9Y2G9 1366 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 RPS6KA4O75676 772 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 CHRNA5P30532 468 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 ITPK1Q13572 414 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 NBPF6Q5VWK0 638 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 TTLL6Q8N841 843 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 TMC1Q8TDI8 760 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 NBPF4Q96M43 638 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 ABT1Q9ULW3 272 aaKnown RBP7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 SPG7Q9UQ90 795 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 TAF1LQ8IZX4 1826 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 CNTNAP4Q9C0A0 1308 aa7.01□□□□□ -1.29
AC055854.1-202ENST00000519624 CYP27B1O15528 508 aa7□□□□□ -1.29
AC055854.1-202ENST00000519624 ZEB1P37275 1124 aaPredicted RBP7□□□□□ -1.29
AC055854.1-202ENST00000519624 NKX1-1Q15270 411 aaPredicted RBP7□□□□□ -1.29
AC055854.1-202ENST00000519624 MCOLN1Q9GZU1 580 aa7□□□□□ -1.29
AC055854.1-202ENST00000519624 CLEC11AQ9Y240 323 aa7□□□□□ -1.29
AC055854.1-202ENST00000519624 PAXIP1Q6ZW49 1069 aaPredicted RBP6.99□□□□□ -1.29
AC055854.1-202ENST00000519624 PNMA8AQ86V59 439 aaPredicted RBP6.99□□□□□ -1.29
AC055854.1-202ENST00000519624 USHBP1Q8N6Y0 703 aa6.99□□□□□ -1.29
AC055854.1-202ENST00000519624 ASAP1Q9ULH1 1129 aa6.99□□□□□ -1.29
AC055854.1-202ENST00000519624 PDZRN3Q9UPQ7 1066 aa6.99□□□□□ -1.29
AC055854.1-202ENST00000519624 H0YIN7 160 aa6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 NFKBIEO00221 500 aa6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 ITGBL1O95965 494 aaPredicted RBP6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 POTEIP0CG38 1075 aa6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 POTEJP0CG39 1038 aa6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 MAP2K2P36507 400 aa6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 DGKZQ13574 1117 aa6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 EAPPQ56P03 285 aaPredicted RBP6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 NBPF15Q8N660 670 aa6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 GPR101Q96P66 508 aaPredicted RBP6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 RBM42Q9BTD8 480 aaKnown RBP6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 TAF1DQ9H5J8 278 aaPredicted RBP6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 ZNF219Q9P2Y4 722 aaPredicted RBP6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 MON2Q7Z3U7 1717 aa6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 BRCA1P38398 1863 aaKnown RBP6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 USP42Q9H9J4 1324 aaKnown RBP6.98□□□□□ -1.29
AC055854.1-202ENST00000519624 POLRMTO00411 1230 aaKnown RBP6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 ZPR1O75312 459 aa6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 DDNO94850 711 aaPredicted RBP6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 FKBP8Q14318 412 aa6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 SOGA3Q5TF21 947 aa6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 IFNL2Q8IZJ0 200 aa6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 L3MBTL3Q96JM7 780 aaPredicted RBP6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 CAPNS2Q96L46 248 aa6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 ATG3Q9NT62 314 aa6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 LTBP3Q9NS15 1303 aa6.97□□□□□ -1.29
AC055854.1-202ENST00000519624 RAB3GAP2Q9H2M9 1393 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms