RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	GNAI1	P63096	354 aa		14.11	□□□□□ -0.15
CHTF8-206	ENST00000519534	DCTN1	Q14203	1278 aa		14.1	□□□□□ -0.15
CHTF8-206	ENST00000519534	FAM182B	Q5T319	152 aa		14.1	□□□□□ -0.15
CHTF8-206	ENST00000519534	BTBD11	A6QL63	1104 aa		14.09	□□□□□ -0.15
CHTF8-206	ENST00000519534	KCNQ2	O43526	872 aa		14.09	□□□□□ -0.15
CHTF8-206	ENST00000519534	HNRNPU	Q00839	825 aa	Known RBP eCLIP	14.09	□□□□□ -0.15
CHTF8-206	ENST00000519534	GOLGA2	Q08379	1002 aa		14.09	□□□□□ -0.15
CHTF8-206	ENST00000519534	ACSBG1	Q96GR2	724 aa		14.09	□□□□□ -0.15
CHTF8-206	ENST00000519534	MRC1	P22897	1456 aa		14.09	□□□□□ -0.15
CHTF8-206	ENST00000519534	ADAMTS7	Q9UKP4	1686 aa		14.09	□□□□□ -0.15
CHTF8-206	ENST00000519534	ZBED9	Q6R2W3	1325 aa		14.09	□□□□□ -0.15
CHTF8-206	ENST00000519534		E9PSI1	815 aa		14.08	□□□□□ -0.16
CHTF8-206	ENST00000519534	TRIM37	O94972	964 aa		14.08	□□□□□ -0.16
CHTF8-206	ENST00000519534	ZNF790	Q6PG37	636 aa		14.08	□□□□□ -0.16
CHTF8-206	ENST00000519534	VSIG10	Q8N0Z9	540 aa		14.08	□□□□□ -0.16
CHTF8-206	ENST00000519534	SYTL4	Q96C24	671 aa	Predicted RBP	14.08	□□□□□ -0.16
CHTF8-206	ENST00000519534	CHMP4A	Q9BY43	222 aa		14.08	□□□□□ -0.16
CHTF8-206	ENST00000519534	ATG3	Q9NT62	314 aa		14.08	□□□□□ -0.16
CHTF8-206	ENST00000519534	SHANK3	Q9BYB0	1731 aa		14.07	□□□□□ -0.16
CHTF8-206	ENST00000519534	CNKSR2	Q8WXI2	1034 aa		14.07	□□□□□ -0.16
CHTF8-206	ENST00000519534	MYH16	Q9H6N6	1097 aa		14.07	□□□□□ -0.16
CHTF8-206	ENST00000519534	SOS1	Q07889	1333 aa	Predicted RBP	14.07	□□□□□ -0.16
CHTF8-206	ENST00000519534	SF3B2	Q13435	895 aa	Known RBP	14.06	□□□□□ -0.16
CHTF8-206	ENST00000519534	TRMT2A	Q8IZ69	625 aa	Known RBP	14.06	□□□□□ -0.16
CHTF8-206	ENST00000519534	TTC5	Q8N0Z6	440 aa		14.06	□□□□□ -0.16
CHTF8-206	ENST00000519534	THUMPD2	Q9BTF0	503 aa	Known RBP	14.06	□□□□□ -0.16
CHTF8-206	ENST00000519534	TEX13A	Q9BXU3	409 aa	Predicted RBP	14.06	□□□□□ -0.16
CHTF8-206	ENST00000519534	SLFN5	Q08AF3	891 aa		14.05	□□□□□ -0.16
CHTF8-206	ENST00000519534	SLC27A3	Q5K4L6	730 aa		14.05	□□□□□ -0.16
CHTF8-206	ENST00000519534	ILDR2	Q71H61	639 aa		14.05	□□□□□ -0.16
CHTF8-206	ENST00000519534	RNF216	Q9NWF9	866 aa	Predicted RBP	14.05	□□□□□ -0.16
CHTF8-206	ENST00000519534	TSPYL4	Q9UJ04	414 aa		14.05	□□□□□ -0.16
CHTF8-206	ENST00000519534	ASAP1	Q9ULH1	1129 aa		14.05	□□□□□ -0.16
CHTF8-206	ENST00000519534	SALL2	Q9Y467	1007 aa	Predicted RBP	14.05	□□□□□ -0.16
CHTF8-206	ENST00000519534	APBA3	O96018	575 aa		14.04	□□□□□ -0.16
CHTF8-206	ENST00000519534	FMNL2	Q96PY5	1086 aa		14.04	□□□□□ -0.16
CHTF8-206	ENST00000519534	HEG1	Q9ULI3	1381 aa		14.04	□□□□□ -0.16
CHTF8-206	ENST00000519534	HOXB7	P09629	217 aa		14.03	□□□□□ -0.16
CHTF8-206	ENST00000519534	BAG6	P46379	1132 aa		14.03	□□□□□ -0.16
CHTF8-206	ENST00000519534	EIF4A1	P60842	406 aa	Known RBP	14.03	□□□□□ -0.16
CHTF8-206	ENST00000519534	UPF1	Q92900	1129 aa	Known RBP eCLIP	14.03	□□□□□ -0.16	4e-8	■■■■□ 22.5
CHTF8-206	ENST00000519534	BRWD3	Q6RI45	1802 aa		14.03	□□□□□ -0.16
CHTF8-206	ENST00000519534	SNRPA1	P09661	255 aa	Known RBP	14.02	□□□□□ -0.17
CHTF8-206	ENST00000519534	CT47B1	P0C2W7	299 aa	Predicted RBP	14.02	□□□□□ -0.17
CHTF8-206	ENST00000519534	PTF1A	Q7RTS3	328 aa		14.02	□□□□□ -0.17
CHTF8-206	ENST00000519534	MBIP	Q9NS73	344 aa		14.02	□□□□□ -0.17
CHTF8-206	ENST00000519534	PALLD	Q8WX93	1383 aa		14.01	□□□□□ -0.17
CHTF8-206	ENST00000519534	LOC102724428	A0A0B4J2F2	783 aa		14.01	□□□□□ -0.17
CHTF8-206	ENST00000519534	SIK1	P57059	783 aa		14.01	□□□□□ -0.17
CHTF8-206	ENST00000519534	SLC39A6	Q13433	755 aa		14.01	□□□□□ -0.17
CHTF8-206	ENST00000519534	ZNF428	Q96B54	188 aa		14.01	□□□□□ -0.17
CHTF8-206	ENST00000519534	ZNF496	Q96IT1	587 aa	Predicted RBP	14.01	□□□□□ -0.17
CHTF8-206	ENST00000519534	CAMKK2	Q96RR4	588 aa		14.01	□□□□□ -0.17
CHTF8-206	ENST00000519534	MIS18A	Q9NYP9	233 aa		14.01	□□□□□ -0.17
CHTF8-206	ENST00000519534	SCN11A	Q9UI33	1791 aa		14.01	□□□□□ -0.17
CHTF8-206	ENST00000519534	GIGYF1	O75420	1035 aa	Predicted RBP	14	□□□□□ -0.17
CHTF8-206	ENST00000519534	SPINK5	Q9NQ38	1064 aa	Predicted RBP	14	□□□□□ -0.17
CHTF8-206	ENST00000519534	LAS1L	Q9Y4W2	734 aa	Known RBP	14	□□□□□ -0.17
CHTF8-206	ENST00000519534	NHS	Q6T4R5	1651 aa		14	□□□□□ -0.17
CHTF8-206	ENST00000519534	KCNQ3	O43525	872 aa		13.99	□□□□□ -0.17
CHTF8-206	ENST00000519534	STARD3NL	O95772	234 aa		13.99	□□□□□ -0.17
CHTF8-206	ENST00000519534	TXNRD1	Q16881	649 aa		13.99	□□□□□ -0.17
CHTF8-206	ENST00000519534	RC3H1	Q5TC82	1133 aa	Known RBP	13.99	□□□□□ -0.17
CHTF8-206	ENST00000519534	DUSP27	Q5VZP5	1158 aa		13.99	□□□□□ -0.17
CHTF8-206	ENST00000519534	PROM2	Q8N271	834 aa		13.99	□□□□□ -0.17
CHTF8-206	ENST00000519534	FANCI	Q9NVI1	1328 aa		13.98	□□□□□ -0.17
CHTF8-206	ENST00000519534	PTCD1	O75127	700 aa	Known RBP	13.98	□□□□□ -0.17
CHTF8-206	ENST00000519534	ATP6V1A	P38606	617 aa		13.98	□□□□□ -0.17
CHTF8-206	ENST00000519534	EP400	Q96L91	3159 aa		13.97	□□□□□ -0.17
CHTF8-206	ENST00000519534	CDCA7L	Q96GN5	454 aa		13.97	□□□□□ -0.17
CHTF8-206	ENST00000519534	SLC4A9	Q96Q91	983 aa		13.97	□□□□□ -0.17
CHTF8-206	ENST00000519534	RBM42	Q9BTD8	480 aa	Known RBP	13.97	□□□□□ -0.17
CHTF8-206	ENST00000519534	CCNL1	Q9UK58	526 aa	Predicted RBP	13.97	□□□□□ -0.17
CHTF8-206	ENST00000519534	TOGARAM1	Q9Y4F4	1720 aa		13.97	□□□□□ -0.17
CHTF8-206	ENST00000519534	ERBB4	Q15303	1308 aa		13.96	□□□□□ -0.17
CHTF8-206	ENST00000519534	DLG5	Q8TDM6	1919 aa		13.96	□□□□□ -0.17
CHTF8-206	ENST00000519534	SENP3-EIF4A1	A0A087X0R7	540 aa		13.96	□□□□□ -0.17
CHTF8-206	ENST00000519534	EN1	Q05925	392 aa	Predicted RBP	13.96	□□□□□ -0.17
CHTF8-206	ENST00000519534	C1QBP	Q07021	282 aa	Known RBP	13.96	□□□□□ -0.17
CHTF8-206	ENST00000519534	VAMP4	O75379	141 aa		13.95	□□□□□ -0.18
CHTF8-206	ENST00000519534	CYP19A1	P11511	503 aa	Predicted RBP	13.95	□□□□□ -0.18
CHTF8-206	ENST00000519534	C8orf58	Q8NAV2	365 aa		13.95	□□□□□ -0.18
CHTF8-206	ENST00000519534	TSR2	Q969E8	191 aa	Known RBP	13.95	□□□□□ -0.18
CHTF8-206	ENST00000519534	DOT1L	Q8TEK3	1739 aa		13.95	□□□□□ -0.18
CHTF8-206	ENST00000519534	SBF2	Q86WG5	1849 aa		13.94	□□□□□ -0.18
CHTF8-206	ENST00000519534	EXOSC9	Q06265	439 aa	Known RBP	13.94	□□□□□ -0.18
CHTF8-206	ENST00000519534	TWISTNB	Q3B726	338 aa	Predicted RBP	13.94	□□□□□ -0.18
CHTF8-206	ENST00000519534	LRRC4B	Q9NT99	713 aa		13.94	□□□□□ -0.18
CHTF8-206	ENST00000519534	KCP	Q6ZWJ8	1503 aa		13.94	□□□□□ -0.18
CHTF8-206	ENST00000519534	SIPA1L3	O60292	1781 aa	Predicted RBP	13.94	□□□□□ -0.18
CHTF8-206	ENST00000519534	CNTNAP4	Q9C0A0	1308 aa		13.93	□□□□□ -0.18
CHTF8-206	ENST00000519534	ITPK1	Q13572	414 aa		13.93	□□□□□ -0.18
CHTF8-206	ENST00000519534	EZH2	Q15910	746 aa	Known RBP	13.93	□□□□□ -0.18
CHTF8-206	ENST00000519534	CCDC30	Q5VVM6	783 aa		13.93	□□□□□ -0.18
CHTF8-206	ENST00000519534	DNAJC10	Q8IXB1	793 aa		13.93	□□□□□ -0.18
CHTF8-206	ENST00000519534	USP16	Q9Y5T5	823 aa		13.93	□□□□□ -0.18
CHTF8-206	ENST00000519534	ITGB4	P16144	1822 aa		13.92	□□□□□ -0.18
CHTF8-206	ENST00000519534	ZNF831	Q5JPB2	1677 aa		13.92	□□□□□ -0.18
CHTF8-206	ENST00000519534	SOCS7	O14512	581 aa		13.92	□□□□□ -0.18
CHTF8-206	ENST00000519534	DEFB132	Q7Z7B7	95 aa		13.92	□□□□□ -0.18

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