RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 NGEFQ8N5V2 710 aa10.08□□□□□ -0.8
SDCBP-206ENST00000519115 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
SDCBP-206ENST00000519115 MRS2Q9HD23 443 aa10.08□□□□□ -0.8
SDCBP-206ENST00000519115 SPINK5Q9NQ38 1064 aaPredicted RBP10.08□□□□□ -0.8
SDCBP-206ENST00000519115 ADAMTS7Q9UKP4 1686 aa10.08□□□□□ -0.8
SDCBP-206ENST00000519115 PALLDQ8WX93 1383 aa10.07□□□□□ -0.8
SDCBP-206ENST00000519115 CENPBP07199 599 aaPredicted RBP10.07□□□□□ -0.8
SDCBP-206ENST00000519115 HSP90AB1P08238 724 aaKnown RBP10.07□□□□□ -0.8
SDCBP-206ENST00000519115 MTHFSDQ2M296 383 aaKnown RBP10.07□□□□□ -0.8
SDCBP-206ENST00000519115 PIGBQ92521 554 aa10.07□□□□□ -0.8
SDCBP-206ENST00000519115 DCAF5Q96JK2 942 aa10.07□□□□□ -0.8
SDCBP-206ENST00000519115 TMOD3Q9NYL9 352 aa10.07□□□□□ -0.8
SDCBP-206ENST00000519115 SIPA1L3O60292 1781 aaPredicted RBP10.06□□□□□ -0.8
SDCBP-206ENST00000519115 CASZ1Q86V15 1759 aa10.06□□□□□ -0.8
SDCBP-206ENST00000519115 NBPF14Q5TI25 921 aa10.06□□□□□ -0.8
SDCBP-206ENST00000519115 PHACTR3Q96KR7 559 aa10.06□□□□□ -0.8
SDCBP-206ENST00000519115 LRRC4BQ9NT99 713 aa10.06□□□□□ -0.8
SDCBP-206ENST00000519115 MRC1P22897 1456 aa10.05□□□□□ -0.8
SDCBP-206ENST00000519115 QSER1Q2KHR3 1735 aa10.05□□□□□ -0.8
SDCBP-206ENST00000519115 MAP3K5Q99683 1374 aa10.05□□□□□ -0.8
SDCBP-206ENST00000519115 CAPN15O75808 1086 aa10.05□□□□□ -0.8
SDCBP-206ENST00000519115 AKAP4Q5JQC9 854 aa10.05□□□□□ -0.8
SDCBP-206ENST00000519115 CCNL1Q9UK58 526 aaPredicted RBP10.05□□□□□ -0.8
SDCBP-206ENST00000519115 ASAP1Q9ULH1 1129 aa10.05□□□□□ -0.8
SDCBP-206ENST00000519115 ERVV-2B6SEH9 535 aa10.04□□□□□ -0.8
SDCBP-206ENST00000519115 CABP4P57796 275 aa10.04□□□□□ -0.8
SDCBP-206ENST00000519115 ZNF827Q17R98 1081 aa10.04□□□□□ -0.8
SDCBP-206ENST00000519115 GAS2L2Q8NHY3 880 aa10.04□□□□□ -0.8
SDCBP-206ENST00000519115 LGR6Q9HBX8 967 aa10.04□□□□□ -0.8
SDCBP-206ENST00000519115 STK32BQ9NY57 414 aa10.04□□□□□ -0.8
SDCBP-206ENST00000519115 C4BP0C0L5 1744 aa10.04□□□□□ -0.8
SDCBP-206ENST00000519115 RNMTO43148 476 aaKnown RBP10.03□□□□□ -0.8
SDCBP-206ENST00000519115 FCHSD2O94868 740 aa10.03□□□□□ -0.8
SDCBP-206ENST00000519115 COL5A3P25940 1745 aaPredicted RBP10.03□□□□□ -0.8
SDCBP-206ENST00000519115 SLC27A3Q5K4L6 730 aa10.03□□□□□ -0.8
SDCBP-206ENST00000519115 UBR3Q6ZT12 1888 aa10.03□□□□□ -0.8
SDCBP-206ENST00000519115 SMARCC1Q92922 1105 aaPredicted RBP10.03□□□□□ -0.8
SDCBP-206ENST00000519115 UBR2Q8IWV8 1755 aa10.03□□□□□ -0.8
SDCBP-206ENST00000519115 LRP5O75197 1615 aa10.03□□□□□ -0.8
SDCBP-206ENST00000519115 TJP1Q07157 1748 aa10.02□□□□□ -0.8
SDCBP-206ENST00000519115 GNAT3A8MTJ3 354 aa10.02□□□□□ -0.81
SDCBP-206ENST00000519115 SLC15A2Q16348 729 aa10.02□□□□□ -0.81
SDCBP-206ENST00000519115 NFATC2IPQ8NCF5 419 aa10.02□□□□□ -0.81
SDCBP-206ENST00000519115 PDGFDQ9GZP0 370 aaPredicted RBP10.02□□□□□ -0.81
SDCBP-206ENST00000519115 ATG3Q9NT62 314 aa10.02□□□□□ -0.81
SDCBP-206ENST00000519115 ZNF831Q5JPB2 1677 aa10.02□□□□□ -0.81
SDCBP-206ENST00000519115 MYH14Q7Z406 1995 aaKnown RBP10.01□□□□□ -0.81
SDCBP-206ENST00000519115 LOC102724428A0A0B4J2F2 783 aa10.01□□□□□ -0.81
SDCBP-206ENST00000519115 SIK1P57059 783 aa10.01□□□□□ -0.81
SDCBP-206ENST00000519115 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
SDCBP-206ENST00000519115 PNNQ9H307 717 aaKnown RBP10.01□□□□□ -0.81
SDCBP-206ENST00000519115 SLC52A2Q9HAB3 445 aa10.01□□□□□ -0.81
SDCBP-206ENST00000519115 PTCD1O75127 700 aaKnown RBP10□□□□□ -0.81
SDCBP-206ENST00000519115 NEFMP07197 916 aa10□□□□□ -0.81
SDCBP-206ENST00000519115 ITPK1Q13572 414 aa10□□□□□ -0.81
SDCBP-206ENST00000519115 WDR43Q15061 677 aaKnown RBP eCLIP10□□□□□ -0.81
SDCBP-206ENST00000519115 CCDC184Q52MB2 194 aa10□□□□□ -0.81
SDCBP-206ENST00000519115 CCDC146Q8IYE0 955 aa10□□□□□ -0.81
SDCBP-206ENST00000519115 IL17REQ8NFR9 667 aa10□□□□□ -0.81
SDCBP-206ENST00000519115 AKT1S1Q96B36 256 aa10□□□□□ -0.81
SDCBP-206ENST00000519115 PLEKHF1Q96S99 279 aa10□□□□□ -0.81
SDCBP-206ENST00000519115 MAPK8IP3Q9UPT6 1336 aa10□□□□□ -0.81
SDCBP-206ENST00000519115 CICQ96RK0 1608 aaPredicted RBP10□□□□□ -0.81
SDCBP-206ENST00000519115 KCPQ6ZWJ8 1503 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 ATP6V1AP38606 617 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 TEFQ10587 303 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 SLC39A6Q13433 755 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 DCTN1Q14203 1278 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 MCM10Q7L590 875 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 LINC00116Q8NCU8 138 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 SLC4A9Q96Q91 983 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 TFCP2L1Q9NZI6 479 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 CEMIPQ8WUJ3 1361 aa9.99□□□□□ -0.81
SDCBP-206ENST00000519115 ZBTB7AO95365 584 aa9.98□□□□□ -0.81
SDCBP-206ENST00000519115 NFE2L2Q16236 605 aa9.98□□□□□ -0.81
SDCBP-206ENST00000519115 RTF1Q92541 710 aaKnown RBP9.98□□□□□ -0.81
SDCBP-206ENST00000519115 PNPLA7Q6ZV29 1317 aa9.98□□□□□ -0.81
SDCBP-206ENST00000519115 C4AP0C0L4 1744 aa9.98□□□□□ -0.81
SDCBP-206ENST00000519115 KDM3BQ7LBC6 1761 aa9.97□□□□□ -0.81
SDCBP-206ENST00000519115 ATXN8OSP0DMR3 200 aa9.97□□□□□ -0.81
SDCBP-206ENST00000519115 SMIM5Q71RC9 77 aa9.97□□□□□ -0.81
SDCBP-206ENST00000519115 AMIGO3Q86WK7 504 aa9.97□□□□□ -0.81
SDCBP-206ENST00000519115 FAM9BQ8IZU0 186 aa9.97□□□□□ -0.81
SDCBP-206ENST00000519115 AK7Q96M32 723 aa9.97□□□□□ -0.81
SDCBP-206ENST00000519115 ADAMTS8Q9UP79 889 aa9.97□□□□□ -0.81
SDCBP-206ENST00000519115 ZBED9Q6R2W3 1325 aa9.97□□□□□ -0.81
SDCBP-206ENST00000519115 PHF14O94880 888 aa9.96□□□□□ -0.82
SDCBP-206ENST00000519115 THUMPD2Q9BTF0 503 aaKnown RBP9.96□□□□□ -0.82
SDCBP-206ENST00000519115 ZNF219Q9P2Y4 722 aaPredicted RBP9.96□□□□□ -0.82
SDCBP-206ENST00000519115 ATF5Q9Y2D1 282 aaPredicted RBP9.96□□□□□ -0.82
SDCBP-206ENST00000519115 RRP7AQ9Y3A4 280 aaKnown RBP9.96□□□□□ -0.82
SDCBP-206ENST00000519115 COL24A1Q17RW2 1714 aa9.96□□□□□ -0.82
SDCBP-206ENST00000519115 GNPATO15228 680 aa9.95□□□□□ -0.82
SDCBP-206ENST00000519115 KCNQ3O43525 872 aa9.95□□□□□ -0.82
SDCBP-206ENST00000519115 DSG3P32926 999 aa9.95□□□□□ -0.82
SDCBP-206ENST00000519115 NEUROD2Q15784 382 aa9.95□□□□□ -0.82
SDCBP-206ENST00000519115 TTC5Q8N0Z6 440 aa9.95□□□□□ -0.82
SDCBP-206ENST00000519115 SPON1Q9HCB6 807 aa9.95□□□□□ -0.82
SDCBP-206ENST00000519115 LAMB4A4D0S4 1761 aa9.94□□□□□ -0.82
SDCBP-206ENST00000519115 BTBD11A6QL63 1104 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms