RNA–Protein interactions for RNA: ENST00000518825.5

CTNNA1-210, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 3,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-210ENST00000518825 FLIIQ13045 1269 aa10.43□□□□□ -0.74
CTNNA1-210ENST00000518825 RTF1Q92541 710 aaKnown RBP10.43□□□□□ -0.74
CTNNA1-210ENST00000518825 NGDNQ8NEJ9 315 aaKnown RBP10.42□□□□□ -0.74
CTNNA1-210ENST00000518825 AMPHP49418 695 aa10.42□□□□□ -0.74
CTNNA1-210ENST00000518825 IL25Q9H293 177 aa10.42□□□□□ -0.74
CTNNA1-210ENST00000518825 GNAI2P04899 355 aa10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 KCNA4P22459 653 aa10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 NLRP6P59044 892 aa10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 UNC5CLQ8IV45 518 aa10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 PALD1Q9ULE6 856 aa10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 N4BP2Q86UW6 1770 aaPredicted RBP10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 GNAT3A8MTJ3 354 aa10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 ERC2O15083 957 aa10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 USP44Q9H0E7 712 aa10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 LMBRD1Q9NUN5 540 aa10.41□□□□□ -0.74
CTNNA1-210ENST00000518825 USP54Q70EL1 1684 aa10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 IBTKQ9P2D0 1353 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 KCNA6P17658 529 aa10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 SKOR2Q2VWA4 1001 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 USHBP1Q8N6Y0 703 aa10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 HTATSF1O43719 755 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 ATP8B2P98198 1209 aa10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 FKBP5Q13451 457 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 KLHL40Q2TBA0 621 aa10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 PHAXQ9H814 394 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 EID1Q9Y6B2 187 aa10.4□□□□□ -0.74
CTNNA1-210ENST00000518825 HMMRO75330 724 aa10.4□□□□□ -0.75
CTNNA1-210ENST00000518825 ISY1Q9ULR0 285 aaKnown RBP10.4□□□□□ -0.75
CTNNA1-210ENST00000518825 LRRFIP2Q9Y608 721 aaKnown RBP10.4□□□□□ -0.75
CTNNA1-210ENST00000518825 MCTP1Q6DN14 999 aa10.39□□□□□ -0.75
CTNNA1-210ENST00000518825 CLCN1P35523 988 aa10.39□□□□□ -0.75
CTNNA1-210ENST00000518825 ESYT1Q9BSJ8 1104 aa10.39□□□□□ -0.75
CTNNA1-210ENST00000518825 MAP3K5Q99683 1374 aa10.39□□□□□ -0.75
CTNNA1-210ENST00000518825 CCDC30Q5VVM6 783 aa10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 LRRCC1Q9C099 1032 aa10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 REC8O95072 547 aa10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 MX1P20591 662 aa10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 LTV1Q96GA3 475 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 STK31Q9BXU1 1019 aa10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 CHMLP26374 656 aa10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 GPT2Q8TD30 523 aa10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 STAP2Q9UGK3 403 aa10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 DDX49Q9Y6V7 483 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-210ENST00000518825 NSFL1CQ9UNZ2 370 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 ANKARQ7Z5J8 1434 aa10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 CEMIPQ8WUJ3 1361 aa10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 TAF7Q15545 349 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 CASC1Q6TDU7 716 aa10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 MED1Q15648 1581 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 CACNA1FO60840 1977 aa10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 NUCB2P80303 420 aa10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 ABTB2Q8N961 1025 aa10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 TMX3Q96JJ7 454 aa10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 LGR6Q9HBX8 967 aa10.37□□□□□ -0.75
CTNNA1-210ENST00000518825 LTN1O94822 1766 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 ST18O60284 1047 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 GNAI3P08754 354 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 PXDNLA1KZ92 1463 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 KCNQ3O43525 872 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 NEK4P51957 841 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 SSH3Q8TE77 659 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 RBM33Q96EV2 1170 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 CWC22Q9HCG8 908 aaKnown RBP10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 PTMSP20962 102 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 NBPF6Q5VWK0 638 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 IL17RAQ96F46 866 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 NBPF4Q96M43 638 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 IL1RAPL2Q9NP60 686 aa10.36□□□□□ -0.75
CTNNA1-210ENST00000518825 NBPF7P0C2Y1 421 aaPredicted RBP10.35□□□□□ -0.75
CTNNA1-210ENST00000518825 ZSCAN23Q3MJ62 389 aa10.35□□□□□ -0.75
CTNNA1-210ENST00000518825 NFAT5O94916 1531 aa10.35□□□□□ -0.75
CTNNA1-210ENST00000518825 RGPD2P0DJD1 1756 aa10.35□□□□□ -0.75
CTNNA1-210ENST00000518825 ESPNB1AK53 854 aa10.35□□□□□ -0.75
CTNNA1-210ENST00000518825 ZNF445P59923 1031 aa10.35□□□□□ -0.75
CTNNA1-210ENST00000518825 CAVIN1Q6NZI2 390 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-210ENST00000518825 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
CTNNA1-210ENST00000518825 PRPF40AO75400 957 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 CUL4AQ13619 759 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 POLA2Q14181 598 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 PI4K2BQ8TCG2 481 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 RILPL2Q969X0 211 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 FER1L4A9Z1Z3 1794 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 EIF4A1P60842 406 aaKnown RBP10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 HDGFL1Q5TGJ6 251 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 PPP1R9BQ96SB3 815 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 SOS1Q07889 1333 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 KDM3BQ7LBC6 1761 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 PPP1R42Q7Z4L9 355 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 THEMISQ8N1K5 641 aaPredicted RBP10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 BABAM1Q9NWV8 329 aa10.34□□□□□ -0.75
CTNNA1-210ENST00000518825 GOLGA6L22H0YM25 854 aa10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 MAP4K4O95819 1239 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 FOXD4L5Q5VV16 416 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 FOXD4L4Q8WXT5 416 aaPredicted RBP10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 RBSNQ9H1K0 784 aa10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 TRIM6-TRIM34B2RNG4 842 aa10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 ANXA1P04083 346 aa10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 ANO2Q9NQ90 1003 aa10.33□□□□□ -0.76
CTNNA1-210ENST00000518825 TMEM63CQ9P1W3 806 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms