RNA–Protein interactions for RNA: ENST00000518723.1

TRAPPC9-204, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-204ENST00000518723 IFNL2Q8IZJ0 200 aa17.21■□□□□ 0.35
TRAPPC9-204ENST00000518723 DNAJC5GQ8N7S2 189 aa17.21■□□□□ 0.35
TRAPPC9-204ENST00000518723 CARD14Q9BXL6 1004 aa17.21■□□□□ 0.35
TRAPPC9-204ENST00000518723 KIF13BQ9NQT8 1826 aa17.21■□□□□ 0.35
TRAPPC9-204ENST00000518723 C10orf71Q711Q0 1435 aa17.21■□□□□ 0.34
TRAPPC9-204ENST00000518723 KDRP35968 1356 aa17.2■□□□□ 0.34
TRAPPC9-204ENST00000518723 PHKG2P15735 406 aa17.2■□□□□ 0.34
TRAPPC9-204ENST00000518723 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
TRAPPC9-204ENST00000518723 EYA1Q99502 592 aa17.2■□□□□ 0.34
TRAPPC9-204ENST00000518723 ATG3Q9NT62 314 aa17.2■□□□□ 0.34
TRAPPC9-204ENST00000518723 KIAA1551Q9HCM1 1747 aa17.2■□□□□ 0.34
TRAPPC9-204ENST00000518723 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
TRAPPC9-204ENST00000518723 ADRA2BP18089 450 aa17.18■□□□□ 0.34
TRAPPC9-204ENST00000518723 TRAPPC3LQ5T215 181 aa17.18■□□□□ 0.34
TRAPPC9-204ENST00000518723 BCS1LQ9Y276 419 aa17.18■□□□□ 0.34
TRAPPC9-204ENST00000518723 RTCBQ9Y3I0 505 aaKnown RBP17.18■□□□□ 0.34
TRAPPC9-204ENST00000518723 A0A0G2JLW4 131 aa17.17■□□□□ 0.34
TRAPPC9-204ENST00000518723 PPM1GO15355 546 aaPredicted RBP17.17■□□□□ 0.34
TRAPPC9-204ENST00000518723 RC3H1Q5TC82 1133 aaKnown RBP17.17■□□□□ 0.34
TRAPPC9-204ENST00000518723 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
TRAPPC9-204ENST00000518723 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
TRAPPC9-204ENST00000518723 ARHGAP27Q6ZUM4 889 aa17.15■□□□□ 0.34
TRAPPC9-204ENST00000518723 ARHGEF1Q92888 912 aaKnown RBP17.15■□□□□ 0.34
TRAPPC9-204ENST00000518723 SLC4A9Q96Q91 983 aa17.15■□□□□ 0.34
TRAPPC9-204ENST00000518723 NMRK2Q9NPI5 230 aa17.15■□□□□ 0.34
TRAPPC9-204ENST00000518723 CNTNAP4Q9C0A0 1308 aa17.15■□□□□ 0.34
TRAPPC9-204ENST00000518723 ERVV-2B6SEH9 535 aa17.14■□□□□ 0.33
TRAPPC9-204ENST00000518723 GYS1P13807 737 aa17.14■□□□□ 0.33
TRAPPC9-204ENST00000518723 DPEP1P16444 411 aa17.14■□□□□ 0.33
TRAPPC9-204ENST00000518723 RBM46Q8TBY0 533 aaKnown RBP17.14■□□□□ 0.33
TRAPPC9-204ENST00000518723 POLKQ9UBT6 870 aa17.14■□□□□ 0.33
TRAPPC9-204ENST00000518723 N4BP2Q86UW6 1770 aaPredicted RBP17.13■□□□□ 0.33
TRAPPC9-204ENST00000518723 RPS6KA4O75676 772 aa17.13■□□□□ 0.33
TRAPPC9-204ENST00000518723 FCHSD2O94868 740 aa17.13■□□□□ 0.33
TRAPPC9-204ENST00000518723 C4AP0C0L4 1744 aa17.13■□□□□ 0.33
TRAPPC9-204ENST00000518723 KCNA3P22001 575 aa17.12■□□□□ 0.33
TRAPPC9-204ENST00000518723 RFC4P35249 363 aa17.12■□□□□ 0.33
TRAPPC9-204ENST00000518723 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
TRAPPC9-204ENST00000518723 HSP90AB1P08238 724 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-204ENST00000518723 EIF4A2Q14240 407 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-204ENST00000518723 C9orf131Q5VYM1 1079 aa17.11■□□□□ 0.33
TRAPPC9-204ENST00000518723 DCAF5Q96JK2 942 aa17.11■□□□□ 0.33
TRAPPC9-204ENST00000518723 RBM42Q9BTD8 480 aaKnown RBP17.11■□□□□ 0.33
TRAPPC9-204ENST00000518723 BRCA1P38398 1863 aaKnown RBP17.1■□□□□ 0.33
TRAPPC9-204ENST00000518723 FSTL1Q12841 308 aa17.1■□□□□ 0.33
TRAPPC9-204ENST00000518723 COL5A3P25940 1745 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-204ENST00000518723 JMYQ8N9B5 988 aa17.09■□□□□ 0.33
TRAPPC9-204ENST00000518723 KLRG1Q96E93 195 aa17.09■□□□□ 0.33
TRAPPC9-204ENST00000518723 PIM2Q9P1W9 311 aa17.09■□□□□ 0.33
TRAPPC9-204ENST00000518723 WDR90Q96KV7 1748 aa17.08■□□□□ 0.32
TRAPPC9-204ENST00000518723 C16orf71Q8IYS4 520 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC9-204ENST00000518723 KDM6AO15550 1401 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC9-204ENST00000518723 KDM2BQ8NHM5 1336 aa17.07■□□□□ 0.32
TRAPPC9-204ENST00000518723 ARFGEF1Q9Y6D6 1849 aa17.07■□□□□ 0.32
TRAPPC9-204ENST00000518723 PLEKHO1Q53GL0 409 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-204ENST00000518723 DALRD3Q5D0E6 543 aaKnown RBP17.06■□□□□ 0.32
TRAPPC9-204ENST00000518723 PCNTO95613 3336 aa17.05■□□□□ 0.32
TRAPPC9-204ENST00000518723 USP42Q9H9J4 1324 aaKnown RBP17.05■□□□□ 0.32
TRAPPC9-204ENST00000518723 AMOTQ4VCS5 1084 aa17.05■□□□□ 0.32
TRAPPC9-204ENST00000518723 KCPQ6ZWJ8 1503 aa17.05■□□□□ 0.32
TRAPPC9-204ENST00000518723 CRKLP46109 303 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-204ENST00000518723 CABP4P57796 275 aa17.04■□□□□ 0.32
TRAPPC9-204ENST00000518723 DDR1Q08345 913 aa17.04■□□□□ 0.32
TRAPPC9-204ENST00000518723 FKBP8Q14318 412 aa17.04■□□□□ 0.32
TRAPPC9-204ENST00000518723 ZNF530Q6P9A1 599 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC9-204ENST00000518723 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
TRAPPC9-204ENST00000518723 MYH14Q7Z406 1995 aaKnown RBP17.04■□□□□ 0.32
TRAPPC9-204ENST00000518723 HTRA3P83110 453 aa17.03■□□□□ 0.32
TRAPPC9-204ENST00000518723 SRP68Q9UHB9 627 aaKnown RBP17.03■□□□□ 0.32
TRAPPC9-204ENST00000518723 ZC3H4Q9UPT8 1303 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-204ENST00000518723 PTCD1O75127 700 aaKnown RBP17.02■□□□□ 0.32
TRAPPC9-204ENST00000518723 TNNT2P45379 298 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC9-204ENST00000518723 COL13A1Q5TAT6 717 aaPredicted RBP17.02■□□□□ 0.32
TRAPPC9-204ENST00000518723 MTHFSP49914 203 aa17.01■□□□□ 0.31
TRAPPC9-204ENST00000518723 RRAGCQ9HB90 399 aa17.01■□□□□ 0.31
TRAPPC9-204ENST00000518723 POLRMTO00411 1230 aaKnown RBP17■□□□□ 0.31
TRAPPC9-204ENST00000518723 TM4SF1P30408 202 aa17■□□□□ 0.31
TRAPPC9-204ENST00000518723 CHRNA5P30532 468 aa17■□□□□ 0.31
TRAPPC9-204ENST00000518723 SMC1BQ8NDV3 1235 aa17■□□□□ 0.31
TRAPPC9-204ENST00000518723 C1orf141Q5JVX7 400 aa16.99■□□□□ 0.31
TRAPPC9-204ENST00000518723 INTS5Q6P9B9 1019 aaKnown RBP16.99■□□□□ 0.31
TRAPPC9-204ENST00000518723 NFATC2IPQ8NCF5 419 aa16.99■□□□□ 0.31
TRAPPC9-204ENST00000518723 TNRC6CQ9HCJ0 1690 aaKnown RBP16.99■□□□□ 0.31
TRAPPC9-204ENST00000518723 TJP1Q07157 1748 aa16.98■□□□□ 0.31
TRAPPC9-204ENST00000518723 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
TRAPPC9-204ENST00000518723 AEBP1Q8IUX7 1158 aa16.97■□□□□ 0.31
TRAPPC9-204ENST00000518723 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.3
TRAPPC9-204ENST00000518723 ZPR1O75312 459 aa16.95■□□□□ 0.3
TRAPPC9-204ENST00000518723 USPL1Q5W0Q7 1092 aa16.95■□□□□ 0.3
TRAPPC9-204ENST00000518723 TIMELESSQ9UNS1 1208 aa16.95■□□□□ 0.3
TRAPPC9-204ENST00000518723 SBF1O95248 1867 aa16.95■□□□□ 0.3
TRAPPC9-204ENST00000518723 GLTPD2A6NH11 291 aa16.94■□□□□ 0.3
TRAPPC9-204ENST00000518723 VEGFAP15692 232 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC9-204ENST00000518723 LMNB1P20700 586 aa16.94■□□□□ 0.3
TRAPPC9-204ENST00000518723 RASSF7Q02833 373 aa16.94■□□□□ 0.3
TRAPPC9-204ENST00000518723 TNS4Q8IZW8 715 aa16.94■□□□□ 0.3
TRAPPC9-204ENST00000518723 PRELPP51888 382 aa16.93■□□□□ 0.3
TRAPPC9-204ENST00000518723 SULT6B1Q6IMI4 303 aa16.93■□□□□ 0.3
TRAPPC9-204ENST00000518723 DNAJC10Q8IXB1 793 aa16.93■□□□□ 0.3
TRAPPC9-204ENST00000518723 CYP19A1P11511 503 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms