RNA–Protein interactions for RNA: ENST00000518646.5

EFCAB13-206, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 5

Gene EFCAB13, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-206ENST00000518646 ICMTO60725 284 aa7.87□□□□□ -1.15
EFCAB13-206ENST00000518646 PSEN2P49810 448 aa7.87□□□□□ -1.15
EFCAB13-206ENST00000518646 KCNH2Q12809 1159 aa7.87□□□□□ -1.15
EFCAB13-206ENST00000518646 RETREG3Q86VR2 466 aa7.87□□□□□ -1.15
EFCAB13-206ENST00000518646 RNF135Q8IUD6 432 aa7.87□□□□□ -1.15
EFCAB13-206ENST00000518646 PLPP7Q8NBV4 271 aa7.87□□□□□ -1.15
EFCAB13-206ENST00000518646 POLR3GLQ9BT43 218 aa7.87□□□□□ -1.15
EFCAB13-206ENST00000518646 FKBPLQ9UIM3 349 aa7.87□□□□□ -1.15
EFCAB13-206ENST00000518646 DCTN4Q9UJW0 460 aa7.87□□□□□ -1.15
EFCAB13-206ENST00000518646 ANKRD62A6NC57 917 aa7.86□□□□□ -1.15
EFCAB13-206ENST00000518646 EML3Q32P44 896 aa7.86□□□□□ -1.15
EFCAB13-206ENST00000518646 EAPPQ56P03 285 aaPredicted RBP7.86□□□□□ -1.15
EFCAB13-206ENST00000518646 THSD4Q6ZMP0 1018 aa7.86□□□□□ -1.15
EFCAB13-206ENST00000518646 NEO1Q92859 1461 aa7.86□□□□□ -1.15
EFCAB13-206ENST00000518646 LRRC7Q96NW7 1537 aa7.85□□□□□ -1.15
EFCAB13-206ENST00000518646 LCE2AQ5TA79 106 aaPredicted RBP7.85□□□□□ -1.15
EFCAB13-206ENST00000518646 DESI1Q6ICB0 168 aa7.85□□□□□ -1.15
EFCAB13-206ENST00000518646 BACH2Q9BYV9 841 aa7.85□□□□□ -1.15
EFCAB13-206ENST00000518646 DNAAF2Q9NVR5 837 aaKnown RBP7.85□□□□□ -1.15
EFCAB13-206ENST00000518646 CXXC1Q9P0U4 656 aaPredicted RBP7.85□□□□□ -1.15
EFCAB13-206ENST00000518646 CEP126Q9P2H0 1117 aa7.85□□□□□ -1.15
EFCAB13-206ENST00000518646 LRP5O75197 1615 aa7.85□□□□□ -1.15
EFCAB13-206ENST00000518646 NRG2O14511 850 aaPredicted RBP7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 C21orf2O43822 256 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 ATP6V1AP38606 617 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 ATP1A2P50993 1020 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 CLDN10P78369 228 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 COL19A1Q14993 1142 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 PROX2Q3B8N5 592 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 GIMAP6Q6P9H5 292 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 LYPD8Q6UX82 237 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 DPH6Q7L8W6 267 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 TAS1R3Q7RTX0 852 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 TRIM50Q86XT4 487 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 PRIMPOLQ96LW4 560 aa7.84□□□□□ -1.15
EFCAB13-206ENST00000518646 RICTORQ6R327 1708 aa7.83□□□□□ -1.16
EFCAB13-206ENST00000518646 CEP350Q5VT06 3117 aa7.83□□□□□ -1.16
EFCAB13-206ENST00000518646 C3P01024 1663 aa7.83□□□□□ -1.16
EFCAB13-206ENST00000518646 SCAMP3O14828 347 aaKnown RBP7.83□□□□□ -1.16
EFCAB13-206ENST00000518646 CFHP08603 1231 aa7.83□□□□□ -1.16
EFCAB13-206ENST00000518646 HDLBPQ00341 1268 aaKnown RBP7.83□□□□□ -1.16
EFCAB13-206ENST00000518646 C9orf131Q5VYM1 1079 aa7.83□□□□□ -1.16
EFCAB13-206ENST00000518646 ZNF592Q92610 1267 aa7.83□□□□□ -1.16
EFCAB13-206ENST00000518646 TRAPPC8Q9Y2L5 1435 aa7.83□□□□□ -1.16
EFCAB13-206ENST00000518646 ZC3H4Q9UPT8 1303 aaKnown RBP7.82□□□□□ -1.16
EFCAB13-206ENST00000518646 SLC4A3P48751 1232 aa7.82□□□□□ -1.16
EFCAB13-206ENST00000518646 OCLNQ16625 522 aa7.82□□□□□ -1.16
EFCAB13-206ENST00000518646 PHTF2Q8N3S3 785 aa7.82□□□□□ -1.16
EFCAB13-206ENST00000518646 GTF3C2Q8WUA4 911 aaPredicted RBP7.82□□□□□ -1.16
EFCAB13-206ENST00000518646 HIRIP3Q9BW71 556 aaPredicted RBP7.82□□□□□ -1.16
EFCAB13-206ENST00000518646 CWC22Q9HCG8 908 aaKnown RBP7.82□□□□□ -1.16
EFCAB13-206ENST00000518646 RAPGEF6Q8TEU7 1601 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 SHANK2Q9UPX8 1470 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 WRNQ14191 1432 aaPredicted RBP eCLIP7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 ITGBL1O95965 494 aaPredicted RBP7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 MRPL58Q14197 206 aaKnown RBP7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 MAP7D1Q3KQU3 841 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 RGL4Q8IZJ4 473 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 LARGE2Q8N3Y3 721 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 PIK3R5Q8WYR1 880 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 NOD1Q9Y239 953 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 RBM19Q9Y4C8 960 aaKnown RBP7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 PCDHB9Q9Y5E1 797 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 EFCAB5A4FU69 1503 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 ZFYVE16Q7Z3T8 1539 aa7.81□□□□□ -1.16
EFCAB13-206ENST00000518646 PSDA5PKW4 1024 aaPredicted RBP7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 RXRBP28702 533 aa7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 HDGFP51858 240 aaKnown RBP7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 SEC13P55735 322 aa7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 SIX5Q8N196 739 aa7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 TANGO6Q9C0B7 1094 aa7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 KIAA1024Q9UPX6 916 aa7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 PLA2R1Q13018 1463 aa7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 TCOF1Q13428 1488 aaKnown RBP7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 CDK12Q9NYV4 1490 aaPredicted RBP7.8□□□□□ -1.16
EFCAB13-206ENST00000518646 MCCD1P59942 119 aaPredicted RBP7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 ARHGAP4P98171 946 aa7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 FKBP4Q02790 459 aaKnown RBP eCLIP7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 SUZ12Q15022 739 aaKnown RBP7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 ECM1Q16610 540 aa7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 ZNF772Q68DY9 489 aaPredicted RBP7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 TREML4Q6UXN2 200 aa7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 DNAJC2Q99543 621 aaKnown RBP7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 MKNK1Q9BUB5 465 aa7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 KIAA1468Q9P260 1216 aa7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 SEPT3Q9UH03 358 aa7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 DNMT3AQ9Y6K1 912 aaPredicted RBP7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 DENND4BO75064 1496 aaPredicted RBP7.79□□□□□ -1.16
EFCAB13-206ENST00000518646 FHOD3Q2V2M9 1422 aa7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 ZMYM4Q5VZL5 1548 aa7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 DKK1O94907 266 aa7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 FMNL1O95466 1100 aaPredicted RBP7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 F12P00748 615 aaPredicted RBP7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 P4HBP07237 508 aaKnown RBP7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 SF3B2Q13435 895 aaKnown RBP7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 MTMR3Q13615 1198 aa7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 Q3C1V9 767 aa7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 MAP10Q9P2G4 905 aa7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 STK17AQ9UEE5 414 aa7.78□□□□□ -1.16
EFCAB13-206ENST00000518646 CHIC2Q9UKJ5 165 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms