RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 UPP2O95045 317 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 INHAP05111 366 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 CSB-PGBD3P0DP91 1061 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 GDF10P55107 478 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 DPYDQ12882 1025 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 CLN3Q13286 438 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 FAM200AQ8TCP9 573 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 XAGE2Q96GT9 111 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 ZNF594Q96JF6 807 aaPredicted RBP7.04□□□□□ -1.28
VPS13B-207ENST00000518569 ZFP42Q96MM3 310 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 SLC4A9Q96Q91 983 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 ZMIZ1Q9ULJ6 1067 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 USTQ9Y2C2 406 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 A0A1W2PRU2 124 aa7.03□□□□□ -1.28
VPS13B-207ENST00000518569 SPINT1O43278 529 aa7.03□□□□□ -1.28
VPS13B-207ENST00000518569 LCE2CQ5TA81 110 aa7.03□□□□□ -1.28
VPS13B-207ENST00000518569 MRPL14Q6P1L8 145 aaKnown RBP7.03□□□□□ -1.28
VPS13B-207ENST00000518569 LINC00528Q8N1L1 170 aa7.03□□□□□ -1.28
VPS13B-207ENST00000518569 AGBL1Q96MI9 1066 aa7.03□□□□□ -1.28
VPS13B-207ENST00000518569 PURBQ96QR8 312 aaKnown RBP7.03□□□□□ -1.28
VPS13B-207ENST00000518569 ESYT1Q9BSJ8 1104 aa7.03□□□□□ -1.28
VPS13B-207ENST00000518569 ETNK1Q9HBU6 452 aa7.03□□□□□ -1.28
VPS13B-207ENST00000518569 GPC1P35052 558 aa7.02□□□□□ -1.29
VPS13B-207ENST00000518569 RELBQ01201 579 aa7.02□□□□□ -1.29
VPS13B-207ENST00000518569 SWI5Q1ZZU3 235 aa7.02□□□□□ -1.29
VPS13B-207ENST00000518569 IRF7Q92985 503 aa7.02□□□□□ -1.29
VPS13B-207ENST00000518569 ARHGEF10LQ9HCE6 1279 aa7.02□□□□□ -1.29
VPS13B-207ENST00000518569 HRH3Q9Y5N1 445 aa7.02□□□□□ -1.29
VPS13B-207ENST00000518569 SFI1A8K8P3 1242 aa7.01□□□□□ -1.29
VPS13B-207ENST00000518569 IL2RAP01589 272 aa7.01□□□□□ -1.29
VPS13B-207ENST00000518569 HOMEZQ8IX15 550 aa7.01□□□□□ -1.29
VPS13B-207ENST00000518569 RETREG2Q8NC44 543 aa7.01□□□□□ -1.29
VPS13B-207ENST00000518569 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.01□□□□□ -1.29
VPS13B-207ENST00000518569 STK32AQ8WU08 396 aa7.01□□□□□ -1.29
VPS13B-207ENST00000518569 CNKSR1Q969H4 720 aa7.01□□□□□ -1.29
VPS13B-207ENST00000518569 ZNF358Q9NW07 568 aa7.01□□□□□ -1.29
VPS13B-207ENST00000518569 GMPRP36959 345 aa7□□□□□ -1.29
VPS13B-207ENST00000518569 MTFR1Q15390 333 aa7□□□□□ -1.29
VPS13B-207ENST00000518569 C6orf118Q5T5N4 469 aa7□□□□□ -1.29
VPS13B-207ENST00000518569 TMEM164Q5U3C3 297 aa7□□□□□ -1.29
VPS13B-207ENST00000518569 NLRP3Q96P20 1036 aa7□□□□□ -1.29
VPS13B-207ENST00000518569 ZNF395Q9H8N7 513 aaPredicted RBP7□□□□□ -1.29
VPS13B-207ENST00000518569 RAB6BQ9NRW1 208 aa7□□□□□ -1.29
VPS13B-207ENST00000518569 TMEM88BA6NKF7 163 aa6.99□□□□□ -1.29
VPS13B-207ENST00000518569 SOBPA7XYQ1 873 aa6.99□□□□□ -1.29
VPS13B-207ENST00000518569 STAU1O95793 577 aaKnown RBP6.99□□□□□ -1.29
VPS13B-207ENST00000518569 BMP2P12643 396 aa6.99□□□□□ -1.29
VPS13B-207ENST00000518569 RNF144AP50876 292 aaPredicted RBP6.99□□□□□ -1.29
VPS13B-207ENST00000518569 SMTNP53814 917 aa6.99□□□□□ -1.29
VPS13B-207ENST00000518569 FAM69CQ0P6D2 419 aa6.99□□□□□ -1.29
VPS13B-207ENST00000518569 CLP1Q92989 425 aaKnown RBP6.99□□□□□ -1.29
VPS13B-207ENST00000518569 FAM181BA6NEQ2 426 aa6.98□□□□□ -1.29
VPS13B-207ENST00000518569 A6NJY4 79 aa6.98□□□□□ -1.29
VPS13B-207ENST00000518569 MEN1O00255 615 aa6.98□□□□□ -1.29
VPS13B-207ENST00000518569 CDK2AP1O14519 115 aa6.98□□□□□ -1.29
VPS13B-207ENST00000518569 EPHA4P54764 986 aa6.98□□□□□ -1.29
VPS13B-207ENST00000518569 CENPCQ03188 943 aa6.98□□□□□ -1.29
VPS13B-207ENST00000518569 NPAS3Q8IXF0 933 aa6.98□□□□□ -1.29
VPS13B-207ENST00000518569 FHDC1Q9C0D6 1143 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-207ENST00000518569 GRIP2Q9C0E4 1043 aa6.98□□□□□ -1.29
VPS13B-207ENST00000518569 SERTAD1Q9UHV2 236 aa6.98□□□□□ -1.29
VPS13B-207ENST00000518569 H3BM21 787 aa6.97□□□□□ -1.29
VPS13B-207ENST00000518569 MAN1A2O60476 641 aa6.97□□□□□ -1.29
VPS13B-207ENST00000518569 TLR1Q15399 786 aa6.97□□□□□ -1.29
VPS13B-207ENST00000518569 TSEN2Q8NCE0 465 aaKnown RBP6.97□□□□□ -1.29
VPS13B-207ENST00000518569 GAS2L2Q8NHY3 880 aa6.97□□□□□ -1.29
VPS13B-207ENST00000518569 INSM2Q96T92 566 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-207ENST00000518569 TRAIPQ9BWF2 469 aa6.97□□□□□ -1.29
VPS13B-207ENST00000518569 SOS2Q07890 1332 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-207ENST00000518569 CTSOP43234 321 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-207ENST00000518569 FOXK2Q01167 660 aa6.96□□□□□ -1.3
VPS13B-207ENST00000518569 FOXD4L5Q5VV16 416 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-207ENST00000518569 NBPF15Q8N660 670 aa6.96□□□□□ -1.3
VPS13B-207ENST00000518569 ZSCAN10Q96SZ4 725 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-207ENST00000518569 HINFPQ9BQA5 517 aa6.96□□□□□ -1.3
VPS13B-207ENST00000518569 POLMQ9NP87 494 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-207ENST00000518569 SCHIP1Q9P0W5 487 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-207ENST00000518569 GTF2E1P29083 439 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-207ENST00000518569 PPARGC1BQ86YN6 1023 aaKnown RBP6.95□□□□□ -1.3
VPS13B-207ENST00000518569 TNS4Q8IZW8 715 aa6.95□□□□□ -1.3
VPS13B-207ENST00000518569 ZSCAN1Q8NBB4 408 aa6.95□□□□□ -1.3
VPS13B-207ENST00000518569 IQSEC3Q9UPP2 1182 aaPredicted RBP6.95□□□□□ -1.3
VPS13B-207ENST00000518569 ERBB4Q15303 1308 aa6.95□□□□□ -1.3
VPS13B-207ENST00000518569 TTLL8A6PVC2 850 aa6.94□□□□□ -1.3
VPS13B-207ENST00000518569 SPATA31C2B4DYI2 1134 aa6.94□□□□□ -1.3
VPS13B-207ENST00000518569 IGFBP4P22692 258 aa6.94□□□□□ -1.3
VPS13B-207ENST00000518569 WEE1P30291 646 aa6.94□□□□□ -1.3
VPS13B-207ENST00000518569 WDR44Q5JSH3 913 aa6.94□□□□□ -1.3
VPS13B-207ENST00000518569 SLC27A3Q5K4L6 730 aa6.94□□□□□ -1.3
VPS13B-207ENST00000518569 B4GALNT3Q6L9W6 998 aa6.94□□□□□ -1.3
VPS13B-207ENST00000518569 STAG2Q8N3U4 1231 aa6.94□□□□□ -1.3
VPS13B-207ENST00000518569 RNF217Q8TC41 542 aa6.94□□□□□ -1.3
VPS13B-207ENST00000518569 PDIA4P13667 645 aaKnown RBP6.93□□□□□ -1.3
VPS13B-207ENST00000518569 OCLNQ16625 522 aa6.93□□□□□ -1.3
VPS13B-207ENST00000518569 LYSMD3Q7Z3D4 306 aa6.93□□□□□ -1.3
VPS13B-207ENST00000518569 RHBDD1Q8TEB9 315 aa6.93□□□□□ -1.3
VPS13B-207ENST00000518569 ATAD2Q6PL18 1390 aa6.93□□□□□ -1.3
VPS13B-207ENST00000518569 FOXO3O43524 673 aa6.92□□□□□ -1.3
VPS13B-207ENST00000518569 PSMA6P60900 246 aaKnown RBP6.92□□□□□ -1.3
VPS13B-207ENST00000518569 TEAD4Q15561 434 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms