RNA–Protein interactions for RNA: ENST00000518407.1

IGHV3-6-201, Transcript of immunoglobulin heavy variable 3-6 (pseudogene), humanhuman

BASIC

Gene IGHV3-6, Length 347 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-6-201ENST00000518407 PIGBQ92521 554 aa16.59■□□□□ 0.25
IGHV3-6-201ENST00000518407 SLC52A2Q9HAB3 445 aa16.59■□□□□ 0.25
IGHV3-6-201ENST00000518407 KCPQ6ZWJ8 1503 aa16.59■□□□□ 0.25
IGHV3-6-201ENST00000518407 RIPK4P57078 832 aa16.58■□□□□ 0.24
IGHV3-6-201ENST00000518407 DCTN1Q14203 1278 aa16.58■□□□□ 0.24
IGHV3-6-201ENST00000518407 SYTL4Q96C24 671 aaPredicted RBP16.58■□□□□ 0.24
IGHV3-6-201ENST00000518407 TMOD3Q9NYL9 352 aa16.58■□□□□ 0.24
IGHV3-6-201ENST00000518407 TRIM35Q9UPQ4 493 aa16.58■□□□□ 0.24
IGHV3-6-201ENST00000518407 RRP7AQ9Y3A4 280 aaKnown RBP16.58■□□□□ 0.24
IGHV3-6-201ENST00000518407 LAMB4A4D0S4 1761 aa16.57■□□□□ 0.24
IGHV3-6-201ENST00000518407 MCM10Q7L590 875 aa16.57■□□□□ 0.24
IGHV3-6-201ENST00000518407 QSER1Q2KHR3 1735 aa16.56■□□□□ 0.24
IGHV3-6-201ENST00000518407 PLSCR1O15162 318 aa16.56■□□□□ 0.24
IGHV3-6-201ENST00000518407 APBA3O96018 575 aa16.56■□□□□ 0.24
IGHV3-6-201ENST00000518407 CABP4P57796 275 aa16.56■□□□□ 0.24
IGHV3-6-201ENST00000518407 SF3B2Q13435 895 aaKnown RBP16.55■□□□□ 0.24
IGHV3-6-201ENST00000518407 DEFB132Q7Z7B7 95 aa16.55■□□□□ 0.24
IGHV3-6-201ENST00000518407 NFATC2IPQ8NCF5 419 aa16.55■□□□□ 0.24
IGHV3-6-201ENST00000518407 RTF1Q92541 710 aaKnown RBP16.55■□□□□ 0.24
IGHV3-6-201ENST00000518407 PALLDQ8WX93 1383 aa16.54■□□□□ 0.24
IGHV3-6-201ENST00000518407 BAG6P46379 1132 aa16.54■□□□□ 0.24
IGHV3-6-201ENST00000518407 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
IGHV3-6-201ENST00000518407 NEUROD2Q15784 382 aa16.54■□□□□ 0.24
IGHV3-6-201ENST00000518407 NCBP3Q53F19 620 aaKnown RBP16.54■□□□□ 0.24
IGHV3-6-201ENST00000518407 CAMKK2Q96RR4 588 aa16.54■□□□□ 0.24
IGHV3-6-201ENST00000518407 THUMPD2Q9BTF0 503 aaKnown RBP16.54■□□□□ 0.24
IGHV3-6-201ENST00000518407 MYH14Q7Z406 1995 aaKnown RBP16.54■□□□□ 0.24
IGHV3-6-201ENST00000518407 UBR3Q6ZT12 1888 aa16.53■□□□□ 0.24
IGHV3-6-201ENST00000518407 EN1Q05925 392 aaPredicted RBP16.53■□□□□ 0.24
IGHV3-6-201ENST00000518407 ATG3Q9NT62 314 aa16.53■□□□□ 0.24
IGHV3-6-201ENST00000518407 ASAP1Q9ULH1 1129 aa16.53■□□□□ 0.24
IGHV3-6-201ENST00000518407 C4BP0C0L5 1744 aa16.53■□□□□ 0.24
IGHV3-6-201ENST00000518407 TEFQ10587 303 aa16.52■□□□□ 0.24
IGHV3-6-201ENST00000518407 EZH2Q15910 746 aaKnown RBP16.52■□□□□ 0.24
IGHV3-6-201ENST00000518407 CCDC27Q2M243 656 aa16.52■□□□□ 0.24
IGHV3-6-201ENST00000518407 SENP3-EIF4A1A0A087X0R7 540 aa16.51■□□□□ 0.23
IGHV3-6-201ENST00000518407 PROM2Q8N271 834 aa16.51■□□□□ 0.23
IGHV3-6-201ENST00000518407 SMARCC1Q92922 1105 aaPredicted RBP16.5■□□□□ 0.23
IGHV3-6-201ENST00000518407 SLC39A6Q13433 755 aa16.49■□□□□ 0.23
IGHV3-6-201ENST00000518407 TXNRD1Q16881 649 aa16.49■□□□□ 0.23
IGHV3-6-201ENST00000518407 TAF7Q15545 349 aaPredicted RBP16.48■□□□□ 0.23
IGHV3-6-201ENST00000518407 WWC1Q8IX03 1113 aa16.48■□□□□ 0.23
IGHV3-6-201ENST00000518407 NGEFQ8N5V2 710 aa16.48■□□□□ 0.23
IGHV3-6-201ENST00000518407 SLC4A9Q96Q91 983 aa16.48■□□□□ 0.23
IGHV3-6-201ENST00000518407 LRRC4BQ9NT99 713 aa16.48■□□□□ 0.23
IGHV3-6-201ENST00000518407 ZNF521Q96K83 1311 aa16.47■□□□□ 0.23
IGHV3-6-201ENST00000518407 BTBD11A6QL63 1104 aa16.47■□□□□ 0.23
IGHV3-6-201ENST00000518407 KCNQ3O43525 872 aa16.47■□□□□ 0.23
IGHV3-6-201ENST00000518407 ZNF790Q6PG37 636 aa16.47■□□□□ 0.23
IGHV3-6-201ENST00000518407 C4AP0C0L4 1744 aa16.47■□□□□ 0.23
IGHV3-6-201ENST00000518407 LOC102724428A0A0B4J2F2 783 aa16.46■□□□□ 0.23
IGHV3-6-201ENST00000518407 SIK1P57059 783 aa16.46■□□□□ 0.23
IGHV3-6-201ENST00000518407 SLC27A3Q5K4L6 730 aa16.46■□□□□ 0.23
IGHV3-6-201ENST00000518407 CASZ1Q86V15 1759 aa16.46■□□□□ 0.22
IGHV3-6-201ENST00000518407 ZNF853P0CG23 659 aa16.45■□□□□ 0.22
IGHV3-6-201ENST00000518407 BABAM1Q9NWV8 329 aa16.45■□□□□ 0.22
IGHV3-6-201ENST00000518407 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
IGHV3-6-201ENST00000518407 HEG1Q9ULI3 1381 aa16.45■□□□□ 0.22
IGHV3-6-201ENST00000518407 CHL1O00533 1208 aa16.44■□□□□ 0.22
IGHV3-6-201ENST00000518407 KCNQ4P56696 695 aa16.44■□□□□ 0.22
IGHV3-6-201ENST00000518407 ZNF496Q96IT1 587 aaPredicted RBP16.44■□□□□ 0.22
IGHV3-6-201ENST00000518407 MIS18AQ9NYP9 233 aa16.44■□□□□ 0.22
IGHV3-6-201ENST00000518407 PTCD1O75127 700 aaKnown RBP16.43■□□□□ 0.22
IGHV3-6-201ENST00000518407 ITPK1Q13572 414 aa16.43■□□□□ 0.22
IGHV3-6-201ENST00000518407 TTC5Q8N0Z6 440 aa16.43■□□□□ 0.22
IGHV3-6-201ENST00000518407 CFAP44Q96MT7 982 aa16.43■□□□□ 0.22
IGHV3-6-201ENST00000518407 RBM42Q9BTD8 480 aaKnown RBP16.43■□□□□ 0.22
IGHV3-6-201ENST00000518407 IFT57Q9NWB7 429 aa16.43■□□□□ 0.22
IGHV3-6-201ENST00000518407 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
IGHV3-6-201ENST00000518407 IL16Q14005 1332 aa16.43■□□□□ 0.22
IGHV3-6-201ENST00000518407 CALD1Q05682 793 aaKnown RBP16.42■□□□□ 0.22
IGHV3-6-201ENST00000518407 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
IGHV3-6-201ENST00000518407 VSIG10Q8N0Z9 540 aa16.42■□□□□ 0.22
IGHV3-6-201ENST00000518407 LINC00116Q8NCU8 138 aa16.42■□□□□ 0.22
IGHV3-6-201ENST00000518407 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
IGHV3-6-201ENST00000518407 TSPYL4Q9UJ04 414 aa16.42■□□□□ 0.22
IGHV3-6-201ENST00000518407 CACNA1FO60840 1977 aa16.42■□□□□ 0.22
IGHV3-6-201ENST00000518407 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
IGHV3-6-201ENST00000518407 EIF4A1P60842 406 aaKnown RBP16.41■□□□□ 0.22
IGHV3-6-201ENST00000518407 FMNL2Q96PY5 1086 aa16.41■□□□□ 0.22
IGHV3-6-201ENST00000518407 MBIPQ9NS73 344 aa16.41■□□□□ 0.22
IGHV3-6-201ENST00000518407 COL24A1Q17RW2 1714 aa16.41■□□□□ 0.22
IGHV3-6-201ENST00000518407 GNAI1P63096 354 aa16.4■□□□□ 0.22
IGHV3-6-201ENST00000518407 BCORQ6W2J9 1755 aa16.4■□□□□ 0.22
IGHV3-6-201ENST00000518407 ZNF827Q17R98 1081 aa16.39■□□□□ 0.21
IGHV3-6-201ENST00000518407 AKT1S1Q96B36 256 aa16.39■□□□□ 0.21
IGHV3-6-201ENST00000518407 SPINK5Q9NQ38 1064 aaPredicted RBP16.39■□□□□ 0.21
IGHV3-6-201ENST00000518407 DNAJC10Q8IXB1 793 aa16.38■□□□□ 0.21
IGHV3-6-201ENST00000518407 LAS1LQ9Y4W2 734 aaKnown RBP16.38■□□□□ 0.21
IGHV3-6-201ENST00000518407 CNTNAP4Q9C0A0 1308 aa16.38■□□□□ 0.21
IGHV3-6-201ENST00000518407 SCN7AQ01118 1682 aa16.37■□□□□ 0.21
IGHV3-6-201ENST00000518407 PRAMEF22A3QJZ6 481 aa16.37■□□□□ 0.21
IGHV3-6-201ENST00000518407 GIGYF1O75420 1035 aaPredicted RBP16.36■□□□□ 0.21
IGHV3-6-201ENST00000518407 CYP19A1P11511 503 aaPredicted RBP16.36■□□□□ 0.21
IGHV3-6-201ENST00000518407 HNRNPUQ00839 825 aaKnown RBP eCLIP16.36■□□□□ 0.21
IGHV3-6-201ENST00000518407 KRT24Q2M2I5 525 aa16.36■□□□□ 0.21
IGHV3-6-201ENST00000518407 TSR2Q969E8 191 aaKnown RBP16.36■□□□□ 0.21
IGHV3-6-201ENST00000518407 FANCIQ9NVI1 1328 aa16.36■□□□□ 0.21
IGHV3-6-201ENST00000518407 SNRPA1P09661 255 aaKnown RBP16.35■□□□□ 0.21
IGHV3-6-201ENST00000518407 SLC15A2Q16348 729 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms