RNA–Protein interactions for RNA: ENST00000518310.5

TCEA1-203, Transcript of transcription elongation factor A1, humanhuman

TSL 4

Gene TCEA1, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA1-203ENST00000518310 TMOD3Q9NYL9 352 aa28.51■■■□□ 2.15
TCEA1-203ENST00000518310 NPC1L1Q9UHC9 1359 aa28.5■■■□□ 2.15
TCEA1-203ENST00000518310 PHKG2P15735 406 aa28.5■■■□□ 2.15
TCEA1-203ENST00000518310 TNNT2P45379 298 aaPredicted RBP28.5■■■□□ 2.15
TCEA1-203ENST00000518310 CICQ96RK0 1608 aaPredicted RBP28.5■■■□□ 2.15
TCEA1-203ENST00000518310 LINC00116Q8NCU8 138 aa28.49■■■□□ 2.15
TCEA1-203ENST00000518310 ADCY9O60503 1353 aa28.49■■■□□ 2.15
TCEA1-203ENST00000518310 CEP350Q5VT06 3117 aa28.48■■■□□ 2.15
TCEA1-203ENST00000518310 ATP10DQ9P241 1426 aa28.48■■■□□ 2.15
TCEA1-203ENST00000518310 BRCA1P38398 1863 aaKnown RBP28.48■■■□□ 2.15
TCEA1-203ENST00000518310 KDRP35968 1356 aa28.48■■■□□ 2.15
TCEA1-203ENST00000518310 C4AP0C0L4 1744 aa28.47■■■□□ 2.15
TCEA1-203ENST00000518310 MYH14Q7Z406 1995 aaKnown RBP28.47■■■□□ 2.15
TCEA1-203ENST00000518310 VIRMAQ69YN4 1812 aaKnown RBP28.46■■■□□ 2.15
TCEA1-203ENST00000518310 EIF4A2Q14240 407 aaKnown RBP28.46■■■□□ 2.15
TCEA1-203ENST00000518310 IGSF1Q8N6C5 1336 aa28.45■■■□□ 2.15
TCEA1-203ENST00000518310 PHF14O94880 888 aa28.45■■■□□ 2.14
TCEA1-203ENST00000518310 ASAP1Q9ULH1 1129 aa28.45■■■□□ 2.14
TCEA1-203ENST00000518310 N4BP2Q86UW6 1770 aaPredicted RBP28.45■■■□□ 2.14
TCEA1-203ENST00000518310 ITPK1Q13572 414 aa28.44■■■□□ 2.14
TCEA1-203ENST00000518310 SCN11AQ9UI33 1791 aa28.43■■■□□ 2.14
TCEA1-203ENST00000518310 ATP6V1AP38606 617 aa28.42■■■□□ 2.14
TCEA1-203ENST00000518310 ATG3Q9NT62 314 aa28.42■■■□□ 2.14
TCEA1-203ENST00000518310 ERVV-2B6SEH9 535 aa28.4■■■□□ 2.14
TCEA1-203ENST00000518310 GNPATO15228 680 aa28.4■■■□□ 2.14
TCEA1-203ENST00000518310 CC2D1BQ5T0F9 858 aaKnown RBP28.39■■■□□ 2.14
TCEA1-203ENST00000518310 SMIM5Q71RC9 77 aa28.39■■■□□ 2.14
TCEA1-203ENST00000518310 ARFGEF1Q9Y6D6 1849 aa28.39■■■□□ 2.13
TCEA1-203ENST00000518310 HSP90AB1P08238 724 aaKnown RBP28.38■■■□□ 2.13
TCEA1-203ENST00000518310 KDM6AO15550 1401 aaPredicted RBP28.36■■■□□ 2.13
TCEA1-203ENST00000518310 TJP1Q07157 1748 aa28.36■■■□□ 2.13
TCEA1-203ENST00000518310 DCAF5Q96JK2 942 aa28.36■■■□□ 2.13
TCEA1-203ENST00000518310 PXDNLA1KZ92 1463 aa28.35■■■□□ 2.13
TCEA1-203ENST00000518310 ADRA2BP18089 450 aa28.34■■■□□ 2.13
TCEA1-203ENST00000518310 ZEB1P37275 1124 aaPredicted RBP28.34■■■□□ 2.13
TCEA1-203ENST00000518310 RC3H1Q5TC82 1133 aaKnown RBP28.34■■■□□ 2.13
TCEA1-203ENST00000518310 GPBP1L1Q9HC44 474 aaPredicted RBP28.34■■■□□ 2.13
TCEA1-203ENST00000518310 CNTNAP4Q9C0A0 1308 aa28.34■■■□□ 2.13
TCEA1-203ENST00000518310 C10orf71Q711Q0 1435 aa28.33■■■□□ 2.13
TCEA1-203ENST00000518310 AMOTQ4VCS5 1084 aa28.32■■■□□ 2.12
TCEA1-203ENST00000518310 PLEKHO1Q53GL0 409 aaPredicted RBP28.32■■■□□ 2.12
TCEA1-203ENST00000518310 SLC4A9Q96Q91 983 aa28.32■■■□□ 2.12
TCEA1-203ENST00000518310 RTCBQ9Y3I0 505 aaKnown RBP28.32■■■□□ 2.12
TCEA1-203ENST00000518310 MMP10P09238 476 aa28.31■■■□□ 2.12
TCEA1-203ENST00000518310 MTHFSP49914 203 aa28.31■■■□□ 2.12
TCEA1-203ENST00000518310 TRAPPC3LQ5T215 181 aa28.3■■■□□ 2.12
TCEA1-203ENST00000518310 ADAMTS7Q9UKP4 1686 aa28.29■■■□□ 2.12
TCEA1-203ENST00000518310 IL13P35225 146 aa28.29■■■□□ 2.12
TCEA1-203ENST00000518310 NLGN1Q8N2Q7 840 aa28.29■■■□□ 2.12
TCEA1-203ENST00000518310 TGFB2P61812 414 aa28.27■■■□□ 2.12
TCEA1-203ENST00000518310 ZNF530Q6P9A1 599 aaPredicted RBP28.27■■■□□ 2.12
TCEA1-203ENST00000518310 RBM42Q9BTD8 480 aaKnown RBP28.26■■■□□ 2.11
TCEA1-203ENST00000518310 RPS6KA4O75676 772 aa28.25■■■□□ 2.11
TCEA1-203ENST00000518310 COL3A1P02461 1466 aaPredicted RBP28.24■■■□□ 2.11
TCEA1-203ENST00000518310 CABP4P57796 275 aa28.24■■■□□ 2.11
TCEA1-203ENST00000518310 ARHGEF1Q92888 912 aaKnown RBP28.24■■■□□ 2.11
TCEA1-203ENST00000518310 GYS1P13807 737 aa28.23■■■□□ 2.11
TCEA1-203ENST00000518310 C1orf141Q5JVX7 400 aa28.22■■■□□ 2.11
TCEA1-203ENST00000518310 WWC3Q9ULE0 1092 aa28.22■■■□□ 2.11
TCEA1-203ENST00000518310 MRC1P22897 1456 aa28.21■■■□□ 2.11
TCEA1-203ENST00000518310 CNGB1Q14028 1251 aaPredicted RBP28.21■■■□□ 2.11
TCEA1-203ENST00000518310 AEBP1Q8IUX7 1158 aa28.21■■■□□ 2.11
TCEA1-203ENST00000518310 CCDC87Q9NVE4 849 aa28.21■■■□□ 2.11
TCEA1-203ENST00000518310 SBF1O95248 1867 aa28.21■■■□□ 2.11
TCEA1-203ENST00000518310 RFC4P35249 363 aa28.2■■■□□ 2.1
TCEA1-203ENST00000518310 AFDNP55196 1824 aaKnown RBP28.2■■■□□ 2.1
TCEA1-203ENST00000518310 HSPA6P17066 643 aa28.19■■■□□ 2.1
TCEA1-203ENST00000518310 ZNF526Q8TF50 670 aaPredicted RBP28.19■■■□□ 2.1
TCEA1-203ENST00000518310 UBR2Q8IWV8 1755 aa28.19■■■□□ 2.1
TCEA1-203ENST00000518310 DLEC1Q9Y238 1755 aa28.17■■■□□ 2.1
TCEA1-203ENST00000518310 KIF3CO14782 793 aa28.16■■■□□ 2.1
TCEA1-203ENST00000518310 DIAPH1O60610 1272 aaKnown RBP28.16■■■□□ 2.1
TCEA1-203ENST00000518310 PPP2R1AP30153 589 aa28.16■■■□□ 2.1
TCEA1-203ENST00000518310 SULT6B1Q6IMI4 303 aa28.16■■■□□ 2.1
TCEA1-203ENST00000518310 NFATC2IPQ8NCF5 419 aa28.16■■■□□ 2.1
TCEA1-203ENST00000518310 PARP3Q9Y6F1 533 aa28.16■■■□□ 2.1
TCEA1-203ENST00000518310 NRXN2Q9P2S2 1712 aa28.15■■■□□ 2.1
TCEA1-203ENST00000518310 USP42Q9H9J4 1324 aaKnown RBP28.15■■■□□ 2.1
TCEA1-203ENST00000518310 A0A0G2JLW4 131 aa28.14■■■□□ 2.1
TCEA1-203ENST00000518310 CRKLP46109 303 aaKnown RBP28.14■■■□□ 2.1
TCEA1-203ENST00000518310 BCS1LQ9Y276 419 aa28.14■■■□□ 2.1
TCEA1-203ENST00000518310 PTCD1O75127 700 aaKnown RBP28.13■■■□□ 2.09
TCEA1-203ENST00000518310 DPEP1P16444 411 aa28.12■■■□□ 2.09
TCEA1-203ENST00000518310 DDX10Q13206 875 aaKnown RBP28.12■■■□□ 2.09
TCEA1-203ENST00000518310 AKAP4Q5JQC9 854 aa28.11■■■□□ 2.09
TCEA1-203ENST00000518310 KCPQ6ZWJ8 1503 aa28.1■■■□□ 2.09
TCEA1-203ENST00000518310 KCNA3P22001 575 aa28.1■■■□□ 2.09
TCEA1-203ENST00000518310 TNRC6CQ9HCJ0 1690 aaKnown RBP28.1■■■□□ 2.09
TCEA1-203ENST00000518310 SIPA1L3O60292 1781 aaPredicted RBP28.09■■■□□ 2.09
TCEA1-203ENST00000518310 FCHSD2O94868 740 aa28.07■■■□□ 2.08
TCEA1-203ENST00000518310 INTS5Q6P9B9 1019 aaKnown RBP28.07■■■□□ 2.08
TCEA1-203ENST00000518310 SLC52A2Q9HAB3 445 aa28.07■■■□□ 2.08
TCEA1-203ENST00000518310 WDR90Q96KV7 1748 aa28.06■■■□□ 2.08
TCEA1-203ENST00000518310 CCDC88AQ3V6T2 1871 aa28.06■■■□□ 2.08
TCEA1-203ENST00000518310 HMOX1P09601 288 aa28.06■■■□□ 2.08
TCEA1-203ENST00000518310 DDR1Q08345 913 aa28.06■■■□□ 2.08
TCEA1-203ENST00000518310 FKBP8Q14318 412 aa28.06■■■□□ 2.08
TCEA1-203ENST00000518310 ARHGAP27Q6ZUM4 889 aa28.06■■■□□ 2.08
TCEA1-203ENST00000518310 SRP68Q9UHB9 627 aaKnown RBP28.06■■■□□ 2.08
TCEA1-203ENST00000518310 CFAP53Q96M91 514 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms