RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 AATKQ6ZMQ8 1374 aa10.59□□□□□ -0.71
SRGAP3-211ENST00000518265 USP19O94966 1318 aa10.59□□□□□ -0.71
SRGAP3-211ENST00000518265 HMOX1P09601 288 aa10.59□□□□□ -0.71
SRGAP3-211ENST00000518265 HNRNPUQ00839 825 aaKnown RBP eCLIP10.59□□□□□ -0.71
SRGAP3-211ENST00000518265 TRAIPQ9BWF2 469 aa10.59□□□□□ -0.71
SRGAP3-211ENST00000518265 CDK12Q9NYV4 1490 aaPredicted RBP10.59□□□□□ -0.71
SRGAP3-211ENST00000518265 SMG6Q86US8 1419 aaKnown RBP10.59□□□□□ -0.71
SRGAP3-211ENST00000518265 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 NUTM2BA6NNL0 878 aaPredicted RBP10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 NUTM2EB1AL46 878 aaPredicted RBP10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 RAD21O60216 631 aa10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 HOXC9P31274 260 aa10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 NUTM2AQ8IVF1 878 aaPredicted RBP10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 CFAP53Q96M91 514 aa10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 PCMTD1Q96MG8 357 aaPredicted RBP10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 AXIN2Q9Y2T1 843 aa10.58□□□□□ -0.72
SRGAP3-211ENST00000518265 GNPATO15228 680 aa10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 DIAPH1O60610 1272 aaKnown RBP10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 U2AF1L5P0DN76 240 aaPredicted RBP10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 U2AF1Q01081 240 aaKnown RBP eCLIP10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 EIF4A2Q14240 407 aaKnown RBP10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 USHBP1Q8N6Y0 703 aa10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 COL22A1Q8NFW1 1626 aaPredicted RBP10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 ARHGEF10O15013 1369 aa10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 KIAA0232Q92628 1395 aa10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 IQSEC2Q5JU85 1478 aa10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 FNBP4Q8N3X1 1017 aaPredicted RBP10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 LRRC59Q96AG4 307 aaKnown RBP10.57□□□□□ -0.72
SRGAP3-211ENST00000518265 HSPA1LP34931 641 aa10.56□□□□□ -0.72
SRGAP3-211ENST00000518265 IL13P35225 146 aa10.56□□□□□ -0.72
SRGAP3-211ENST00000518265 PLCH1Q4KWH8 1693 aa10.56□□□□□ -0.72
SRGAP3-211ENST00000518265 FLT4P35916 1363 aa10.56□□□□□ -0.72
SRGAP3-211ENST00000518265 PNPLA6Q8IY17 1366 aa10.56□□□□□ -0.72
SRGAP3-211ENST00000518265 ARHGEF25Q86VW2 580 aa10.55□□□□□ -0.72
SRGAP3-211ENST00000518265 KCNH5Q8NCM2 988 aa10.55□□□□□ -0.72
SRGAP3-211ENST00000518265 RRP7AQ9Y3A4 280 aaKnown RBP10.55□□□□□ -0.72
SRGAP3-211ENST00000518265 ADAMTS2O95450 1211 aa10.54□□□□□ -0.72
SRGAP3-211ENST00000518265 KAT6BQ8WYB5 2073 aa10.54□□□□□ -0.72
SRGAP3-211ENST00000518265 LMO7Q8WWI1 1683 aa10.54□□□□□ -0.72
SRGAP3-211ENST00000518265 CAMTA1Q9Y6Y1 1673 aa10.53□□□□□ -0.72
SRGAP3-211ENST00000518265 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
SRGAP3-211ENST00000518265 OSBPP22059 807 aa10.53□□□□□ -0.72
SRGAP3-211ENST00000518265 RETREG2Q8NC44 543 aa10.53□□□□□ -0.72
SRGAP3-211ENST00000518265 IP6K1Q92551 441 aa10.53□□□□□ -0.72
SRGAP3-211ENST00000518265 BLMP54132 1417 aaPredicted RBP10.53□□□□□ -0.72
SRGAP3-211ENST00000518265 APAF1O14727 1248 aa10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 GOLGA2Q08379 1002 aa10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 SULT6B1Q6IMI4 303 aa10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 RGS22Q8NE09 1264 aa10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 OXER1Q8TDS5 423 aa10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 ANKRD24Q8TF21 1146 aa10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 CCDC97Q96F63 343 aaPredicted RBP10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 EYA1Q99502 592 aa10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 PRDM11Q9NQV5 511 aa10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 BCCIPQ9P287 314 aaKnown RBP eCLIP10.52□□□□□ -0.72
SRGAP3-211ENST00000518265 FAM83GA6ND36 823 aa10.52□□□□□ -0.73
SRGAP3-211ENST00000518265 MTMR7Q9Y216 660 aa10.52□□□□□ -0.73
SRGAP3-211ENST00000518265 NUDCQ9Y266 331 aa10.52□□□□□ -0.73
SRGAP3-211ENST00000518265 INSRP06213 1382 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 COL14A1Q05707 1796 aaKnown RBP10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 FAM208AQ9UK61 1670 aaKnown RBP10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 PRKAR2BP31323 418 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 HIC1Q14526 733 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 NBPF6Q5VWK0 638 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 ZNF428Q96B54 188 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 PHACTR3Q96KR7 559 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 NBPF4Q96M43 638 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 TMEM106CQ9BVX2 250 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 STRN4Q9NRL3 753 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 TRPC6Q9Y210 931 aa10.51□□□□□ -0.73
SRGAP3-211ENST00000518265 PRIM1P49642 420 aaKnown RBP10.5□□□□□ -0.73
SRGAP3-211ENST00000518265 NRAPQ86VF7 1730 aa10.5□□□□□ -0.73
SRGAP3-211ENST00000518265 RTL1A6NKG5 1358 aa10.5□□□□□ -0.73
SRGAP3-211ENST00000518265 CSB-PGBD3P0DP91 1061 aa10.49□□□□□ -0.73
SRGAP3-211ENST00000518265 IRF5Q13568 498 aa10.49□□□□□ -0.73
SRGAP3-211ENST00000518265 CCDC136Q96JN2 1154 aa10.49□□□□□ -0.73
SRGAP3-211ENST00000518265 SERPINA10Q9UK55 444 aa10.49□□□□□ -0.73
SRGAP3-211ENST00000518265 LRP6O75581 1613 aa10.49□□□□□ -0.73
SRGAP3-211ENST00000518265 SH3D19Q5HYK7 790 aa10.49□□□□□ -0.73
SRGAP3-211ENST00000518265 PLEKHF1Q96S99 279 aa10.49□□□□□ -0.73
SRGAP3-211ENST00000518265 BTG4Q9NY30 223 aa10.49□□□□□ -0.73
SRGAP3-211ENST00000518265 USP35Q9P2H5 1018 aa10.49□□□□□ -0.73
SRGAP3-211ENST00000518265 FCHSD2O94868 740 aa10.48□□□□□ -0.73
SRGAP3-211ENST00000518265 TCP11L2Q8N4U5 519 aa10.48□□□□□ -0.73
SRGAP3-211ENST00000518265 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
SRGAP3-211ENST00000518265 RUNDC1Q96C34 613 aa10.48□□□□□ -0.73
SRGAP3-211ENST00000518265 NLRP2Q9NX02 1062 aa10.48□□□□□ -0.73
SRGAP3-211ENST00000518265 WNK3Q9BYP7 1800 aa10.48□□□□□ -0.73
SRGAP3-211ENST00000518265 COL5A2P05997 1499 aaPredicted RBP10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 IGSF3O75054 1194 aa10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 HMGB1P09429 215 aaKnown RBP10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 FOXD4L5Q5VV16 416 aaPredicted RBP10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 LARP1Q6PKG0 1096 aaKnown RBP10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 FOXD4L4Q8WXT5 416 aaPredicted RBP10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 CDCA7LQ96GN5 454 aa10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 ERBB3P21860 1342 aa10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 IGSF1Q8N6C5 1336 aa10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 CPDO75976 1380 aa10.47□□□□□ -0.73
SRGAP3-211ENST00000518265 FXR2P51116 673 aaKnown RBP eCLIP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms