RNA–Protein interactions for RNA: ENST00000518263.5

CTNNA1-207, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-207ENST00000518263 FOXO3O43524 673 aa6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 CD2BP2O95400 341 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 ZNF16P17020 682 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 DHX9Q08211 1270 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 SF3B2Q13435 895 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 NAA30Q147X3 362 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 SLC4A9Q96Q91 983 aa6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 TSPAN10Q9H1Z9 355 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 ESF1Q9H501 851 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 KIAA1522Q9P206 1035 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 SERTAD1Q9UHV2 236 aa6.85□□□□□ -1.31
CTNNA1-207ENST00000518263 ATAD2Q6PL18 1390 aa6.84□□□□□ -1.31
CTNNA1-207ENST00000518263 ADD1P35611 737 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-207ENST00000518263 PPP1R26Q5T8A7 1209 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-207ENST00000518263 BCL2L13Q9BXK5 485 aa6.84□□□□□ -1.31
CTNNA1-207ENST00000518263 ADH1CP00326 375 aa6.83□□□□□ -1.32
CTNNA1-207ENST00000518263 NR3C2P08235 984 aa6.83□□□□□ -1.32
CTNNA1-207ENST00000518263 FOXK2Q01167 660 aa6.83□□□□□ -1.32
CTNNA1-207ENST00000518263 CCDC116Q8IYX3 515 aa6.83□□□□□ -1.32
CTNNA1-207ENST00000518263 HELQQ8TDG4 1101 aa6.83□□□□□ -1.32
CTNNA1-207ENST00000518263 GIPC2Q8TF65 315 aa6.83□□□□□ -1.32
CTNNA1-207ENST00000518263 IGSF5Q9NSI5 407 aa6.83□□□□□ -1.32
CTNNA1-207ENST00000518263 DCTN4Q9UJW0 460 aa6.83□□□□□ -1.32
CTNNA1-207ENST00000518263 A0A1W2PRU2 124 aa6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 GNRH1P01148 92 aa6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 NPR3P17342 541 aa6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 MAPK1P28482 360 aa6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 MYT1Q01538 1121 aa6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 NR5A1Q13285 461 aa6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 CYP2U1Q7Z449 544 aa6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 MRRFQ96E11 262 aaKnown RBP6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 ASB16Q96NS5 453 aa6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 SAP130Q9H0E3 1048 aa6.82□□□□□ -1.32
CTNNA1-207ENST00000518263 TBCELQ5QJ74 424 aa6.81□□□□□ -1.32
CTNNA1-207ENST00000518263 FBXO33Q7Z6M2 555 aa6.81□□□□□ -1.32
CTNNA1-207ENST00000518263 CHMP7Q8WUX9 453 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-207ENST00000518263 RNF166Q96A37 237 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-207ENST00000518263 TRIM52Q96A61 297 aa6.81□□□□□ -1.32
CTNNA1-207ENST00000518263 SCHIP1Q9P0W5 487 aaPredicted RBP6.81□□□□□ -1.32
CTNNA1-207ENST00000518263 A6NJY4 79 aa6.8□□□□□ -1.32
CTNNA1-207ENST00000518263 WNT7AO00755 349 aa6.8□□□□□ -1.32
CTNNA1-207ENST00000518263 PPP1R12BO60237 982 aaPredicted RBP6.8□□□□□ -1.32
CTNNA1-207ENST00000518263 TAGLNQ01995 201 aaKnown RBP6.8□□□□□ -1.32
CTNNA1-207ENST00000518263 MTFR1Q15390 333 aa6.8□□□□□ -1.32
CTNNA1-207ENST00000518263 SLC9A9Q8IVB4 645 aa6.8□□□□□ -1.32
CTNNA1-207ENST00000518263 XAGE2Q96GT9 111 aa6.8□□□□□ -1.32
CTNNA1-207ENST00000518263 MRGPRX2Q96LB1 330 aa6.8□□□□□ -1.32
CTNNA1-207ENST00000518263 RAB6BQ9NRW1 208 aa6.8□□□□□ -1.32
CTNNA1-207ENST00000518263 FAM13AO94988 1023 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 IL2RAP01589 272 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 MPSTP25325 297 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 SMTNP53814 917 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 ESCO1Q5FWF5 840 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 STAG2Q8N3U4 1231 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 VTI1AQ96AJ9 217 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 C2orf49Q9BVC5 232 aaPredicted RBP6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 ARHGEF10LQ9HCE6 1279 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 HRH3Q9Y5N1 445 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 USP3Q9Y6I4 520 aa6.79□□□□□ -1.32
CTNNA1-207ENST00000518263 TNFRSF10BO14763 440 aa6.78□□□□□ -1.32
CTNNA1-207ENST00000518263 C16orf46Q6P387 395 aa6.78□□□□□ -1.32
CTNNA1-207ENST00000518263 RGL4Q8IZJ4 473 aa6.78□□□□□ -1.32
CTNNA1-207ENST00000518263 KDF1Q8NAX2 398 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-207ENST00000518263 PGPEP1Q9NXJ5 209 aa6.78□□□□□ -1.32
CTNNA1-207ENST00000518263 IQSEC3Q9UPP2 1182 aaPredicted RBP6.78□□□□□ -1.32
CTNNA1-207ENST00000518263 IGSF3O75054 1194 aa6.77□□□□□ -1.33
CTNNA1-207ENST00000518263 SLC19A1P41440 591 aa6.77□□□□□ -1.33
CTNNA1-207ENST00000518263 COX20Q5RI15 118 aa6.77□□□□□ -1.33
CTNNA1-207ENST00000518263 ZSCAN29Q8IWY8 852 aaPredicted RBP6.77□□□□□ -1.33
CTNNA1-207ENST00000518263 QTRT2Q9H974 415 aaKnown RBP6.77□□□□□ -1.33
CTNNA1-207ENST00000518263 EMILIN1Q9Y6C2 1016 aa6.77□□□□□ -1.33
CTNNA1-207ENST00000518263 CDK2AP1O14519 115 aa6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 ADH1AP07327 375 aa6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 PSMA6P60900 246 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 COL19A1Q14993 1142 aa6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 ZNF326Q5BKZ1 582 aaKnown RBP6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 POTEAQ6S8J7 498 aa6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 TMC7Q7Z402 723 aa6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 SPNS2Q8IVW8 549 aa6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 CNKSR1Q969H4 720 aa6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 RBCK1Q9BYM8 510 aa6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 LRFN2Q9ULH4 789 aa6.76□□□□□ -1.33
CTNNA1-207ENST00000518263 CBLBQ13191 982 aa6.75□□□□□ -1.33
CTNNA1-207ENST00000518263 NNTQ13423 1086 aa6.75□□□□□ -1.33
CTNNA1-207ENST00000518263 TLR1Q15399 786 aa6.75□□□□□ -1.33
CTNNA1-207ENST00000518263 FAM26DQ5JW98 314 aa6.75□□□□□ -1.33
CTNNA1-207ENST00000518263 SPRYD7Q5W111 196 aa6.75□□□□□ -1.33
CTNNA1-207ENST00000518263 ZNF295-AS1Q8N0V1 137 aa6.75□□□□□ -1.33
CTNNA1-207ENST00000518263 ESYT1Q9BSJ8 1104 aa6.75□□□□□ -1.33
CTNNA1-207ENST00000518263 EML1O00423 815 aa6.74□□□□□ -1.33
CTNNA1-207ENST00000518263 FZD6O60353 706 aa6.74□□□□□ -1.33
CTNNA1-207ENST00000518263 ALDH1A1P00352 501 aa6.74□□□□□ -1.33
CTNNA1-207ENST00000518263 EIF1AXP47813 144 aaKnown RBP6.74□□□□□ -1.33
CTNNA1-207ENST00000518263 CLN3Q13286 438 aa6.74□□□□□ -1.33
CTNNA1-207ENST00000518263 SH3PXD2AQ5TCZ1 1133 aa6.74□□□□□ -1.33
CTNNA1-207ENST00000518263 ZDHHC1Q8WTX9 485 aa6.74□□□□□ -1.33
CTNNA1-207ENST00000518263 MYO19Q96H55 970 aa6.74□□□□□ -1.33
CTNNA1-207ENST00000518263 KLF16Q9BXK1 252 aaPredicted RBP6.74□□□□□ -1.33
CTNNA1-207ENST00000518263 FHDC1Q9C0D6 1143 aaPredicted RBP6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms