RNA–Protein interactions for RNA: ENST00000518251.1

BRD9-216, Transcript of bromodomain containing 9, humanhuman

TSL 4

Gene BRD9, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-216ENST00000518251 RRP7AQ9Y3A4 280 aaKnown RBP13.79□□□□□ -0.2
BRD9-216ENST00000518251 C5P01031 1676 aa13.79□□□□□ -0.2
BRD9-216ENST00000518251 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
BRD9-216ENST00000518251 TMPOP42166 694 aaKnown RBP13.78□□□□□ -0.2
BRD9-216ENST00000518251 CCDC27Q2M243 656 aa13.78□□□□□ -0.2
BRD9-216ENST00000518251 AEBP1Q8IUX7 1158 aa13.78□□□□□ -0.2
BRD9-216ENST00000518251 EYA1Q99502 592 aa13.78□□□□□ -0.2
BRD9-216ENST00000518251 YBX3P16989 372 aaKnown RBP eCLIP13.77□□□□□ -0.214e-6■□□□□ 8.3
BRD9-216ENST00000518251 GOLGA2Q08379 1002 aa13.77□□□□□ -0.21
BRD9-216ENST00000518251 NEUROD2Q15784 382 aa13.77□□□□□ -0.21
BRD9-216ENST00000518251 DDX54Q8TDD1 881 aaKnown RBP13.77□□□□□ -0.21
BRD9-216ENST00000518251 TFCP2L1Q9NZI6 479 aa13.77□□□□□ -0.21
BRD9-216ENST00000518251 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
BRD9-216ENST00000518251 NCAPD2Q15021 1401 aa13.76□□□□□ -0.21
BRD9-216ENST00000518251 NFE2L2Q16236 605 aa13.76□□□□□ -0.21
BRD9-216ENST00000518251 WWC1Q8IX03 1113 aa13.76□□□□□ -0.21
BRD9-216ENST00000518251 PELP1Q8IZL8 1130 aaKnown RBP13.76□□□□□ -0.21
BRD9-216ENST00000518251 DLG5Q8TDM6 1919 aa13.76□□□□□ -0.21
BRD9-216ENST00000518251 ADCY9O60503 1353 aa13.75□□□□□ -0.21
BRD9-216ENST00000518251 SYTL4Q96C24 671 aaPredicted RBP13.75□□□□□ -0.21
BRD9-216ENST00000518251 CDCA7LQ96GN5 454 aa13.75□□□□□ -0.21
BRD9-216ENST00000518251 PRIM1P49642 420 aaKnown RBP13.74□□□□□ -0.21
BRD9-216ENST00000518251 RIPK4P57078 832 aa13.74□□□□□ -0.21
BRD9-216ENST00000518251 WDR63Q8IWG1 891 aa13.74□□□□□ -0.21
BRD9-216ENST00000518251 PHACTR3Q96KR7 559 aa13.74□□□□□ -0.21
BRD9-216ENST00000518251 CCNL1Q9UK58 526 aaPredicted RBP13.74□□□□□ -0.21
BRD9-216ENST00000518251 ATP10DQ9P241 1426 aa13.73□□□□□ -0.21
BRD9-216ENST00000518251 LMOD3Q0VAK6 560 aa13.73□□□□□ -0.21
BRD9-216ENST00000518251 E9PSI1 815 aa13.72□□□□□ -0.21
BRD9-216ENST00000518251 SLFN5Q08AF3 891 aa13.72□□□□□ -0.21
BRD9-216ENST00000518251 NBPF6Q5VWK0 638 aa13.72□□□□□ -0.21
BRD9-216ENST00000518251 USHBP1Q8N6Y0 703 aa13.72□□□□□ -0.21
BRD9-216ENST00000518251 NBPF4Q96M43 638 aa13.72□□□□□ -0.21
BRD9-216ENST00000518251 TRIM35Q9UPQ4 493 aa13.72□□□□□ -0.21
BRD9-216ENST00000518251 C4BP0C0L5 1744 aa13.71□□□□□ -0.21
BRD9-216ENST00000518251 MSL1Q68DK7 614 aa13.71□□□□□ -0.21
BRD9-216ENST00000518251 COL23A1Q86Y22 540 aaPredicted RBP13.71□□□□□ -0.21
BRD9-216ENST00000518251 CEP350Q5VT06 3117 aa13.7□□□□□ -0.22
BRD9-216ENST00000518251 PKD1L3Q7Z443 1732 aa13.7□□□□□ -0.22
BRD9-216ENST00000518251 DUSP27Q5VZP5 1158 aa13.7□□□□□ -0.22
BRD9-216ENST00000518251 GAS2L2Q8NHY3 880 aa13.7□□□□□ -0.22
BRD9-216ENST00000518251 ZCRB1Q8TBF4 217 aaKnown RBP13.7□□□□□ -0.22
BRD9-216ENST00000518251 CICQ96RK0 1608 aaPredicted RBP13.7□□□□□ -0.22
BRD9-216ENST00000518251 PALLDQ8WX93 1383 aa13.7□□□□□ -0.22
BRD9-216ENST00000518251 IL16Q14005 1332 aa13.69□□□□□ -0.22
BRD9-216ENST00000518251 TRMT2AQ8IZ69 625 aaKnown RBP13.69□□□□□ -0.22
BRD9-216ENST00000518251 SPINK5Q9NQ38 1064 aaPredicted RBP13.69□□□□□ -0.22
BRD9-216ENST00000518251 TAF1LQ8IZX4 1826 aa13.69□□□□□ -0.22
BRD9-216ENST00000518251 GRIN3BO60391 1043 aa13.68□□□□□ -0.22
BRD9-216ENST00000518251 CALD1Q05682 793 aaKnown RBP13.68□□□□□ -0.22
BRD9-216ENST00000518251 MTHFSDQ2M296 383 aaKnown RBP13.68□□□□□ -0.22
BRD9-216ENST00000518251 IFFO2Q5TF58 517 aa13.68□□□□□ -0.22
BRD9-216ENST00000518251 PLEKHG2Q9H7P9 1386 aa13.68□□□□□ -0.22
BRD9-216ENST00000518251 PCDH11XQ9BZA7 1347 aa13.67□□□□□ -0.22
BRD9-216ENST00000518251 PCDH11YQ9BZA8 1340 aa13.67□□□□□ -0.22
BRD9-216ENST00000518251 MSH5O43196 834 aa13.67□□□□□ -0.22
BRD9-216ENST00000518251 AMIGO3Q86WK7 504 aa13.67□□□□□ -0.22
BRD9-216ENST00000518251 MYH16Q9H6N6 1097 aa13.67□□□□□ -0.22
BRD9-216ENST00000518251 SUPT16HQ9Y5B9 1047 aaKnown RBP13.66□□□□□ -0.22
BRD9-216ENST00000518251 NEFLP07196 543 aa13.65□□□□□ -0.22
BRD9-216ENST00000518251 RCAN3Q9UKA8 241 aa13.65□□□□□ -0.22
BRD9-216ENST00000518251 CD2APQ9Y5K6 639 aa13.65□□□□□ -0.22
BRD9-216ENST00000518251 GTF3C3Q9Y5Q9 886 aa13.65□□□□□ -0.22
BRD9-216ENST00000518251 UBR3Q6ZT12 1888 aa13.65□□□□□ -0.22
BRD9-216ENST00000518251 FANCIQ9NVI1 1328 aa13.64□□□□□ -0.23
BRD9-216ENST00000518251 AMOTQ4VCS5 1084 aa13.64□□□□□ -0.23
BRD9-216ENST00000518251 PLEKHO1Q53GL0 409 aaPredicted RBP13.64□□□□□ -0.23
BRD9-216ENST00000518251 RAPGEF4Q8WZA2 1011 aa13.64□□□□□ -0.23
BRD9-216ENST00000518251 RTF1Q92541 710 aaKnown RBP13.64□□□□□ -0.23
BRD9-216ENST00000518251 HTATSF1O43719 755 aaKnown RBP13.63□□□□□ -0.23
BRD9-216ENST00000518251 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
BRD9-216ENST00000518251 THUMPD2Q9BTF0 503 aaKnown RBP13.63□□□□□ -0.23
BRD9-216ENST00000518251 KIAA1551Q9HCM1 1747 aa13.63□□□□□ -0.23
BRD9-216ENST00000518251 GNAT3A8MTJ3 354 aa13.62□□□□□ -0.23
BRD9-216ENST00000518251 CYP27B1O15528 508 aa13.62□□□□□ -0.23
BRD9-216ENST00000518251 GNAI1P63096 354 aa13.62□□□□□ -0.23
BRD9-216ENST00000518251 DCTN1Q14203 1278 aa13.62□□□□□ -0.23
BRD9-216ENST00000518251 GPBP1L1Q9HC44 474 aaPredicted RBP13.62□□□□□ -0.23
BRD9-216ENST00000518251 IFT57Q9NWB7 429 aa13.62□□□□□ -0.23
BRD9-216ENST00000518251 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
BRD9-216ENST00000518251 ZNF530Q6P9A1 599 aaPredicted RBP13.61□□□□□ -0.23
BRD9-216ENST00000518251 MCM10Q7L590 875 aa13.61□□□□□ -0.23
BRD9-216ENST00000518251 TSR2Q969E8 191 aaKnown RBP13.61□□□□□ -0.23
BRD9-216ENST00000518251 ITGB4P16144 1822 aa13.61□□□□□ -0.23
BRD9-216ENST00000518251 RNF123Q5XPI4 1314 aa13.61□□□□□ -0.23
BRD9-216ENST00000518251 PXDNLA1KZ92 1463 aa13.61□□□□□ -0.23
BRD9-216ENST00000518251 ADAMTS7Q9UKP4 1686 aa13.6□□□□□ -0.23
BRD9-216ENST00000518251 AKAP4Q5JQC9 854 aa13.6□□□□□ -0.23
BRD9-216ENST00000518251 FLAD1Q8NFF5 587 aa13.6□□□□□ -0.23
BRD9-216ENST00000518251 AK7Q96M32 723 aa13.6□□□□□ -0.23
BRD9-216ENST00000518251 CFAP44Q96MT7 982 aa13.6□□□□□ -0.23
BRD9-216ENST00000518251 LAS1LQ9Y4W2 734 aaKnown RBP13.6□□□□□ -0.23
BRD9-216ENST00000518251 PHF14O94880 888 aa13.59□□□□□ -0.23
BRD9-216ENST00000518251 ZNF853P0CG23 659 aa13.59□□□□□ -0.23
BRD9-216ENST00000518251 HSPA6P17066 643 aa13.59□□□□□ -0.23
BRD9-216ENST00000518251 C1orf141Q5JVX7 400 aa13.59□□□□□ -0.23
BRD9-216ENST00000518251 MPRIPQ6WCQ1 1025 aa13.59□□□□□ -0.23
BRD9-216ENST00000518251 SMIM5Q71RC9 77 aa13.59□□□□□ -0.23
BRD9-216ENST00000518251 ZNF526Q8TF50 670 aaPredicted RBP13.59□□□□□ -0.23
BRD9-216ENST00000518251 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms