RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 LAS1LQ9Y4W2 734 aaKnown RBP13.74□□□□□ -0.21
PABPC1-203ENST00000517921 C5P01031 1676 aa13.73□□□□□ -0.21
PABPC1-203ENST00000517921 CHL1O00533 1208 aa13.73□□□□□ -0.21
PABPC1-203ENST00000517921 MPRIPQ6WCQ1 1025 aa13.73□□□□□ -0.21
PABPC1-203ENST00000517921 SEPT12Q8IYM1 358 aa13.73□□□□□ -0.21
PABPC1-203ENST00000517921 BRWD3Q6RI45 1802 aa13.73□□□□□ -0.21
PABPC1-203ENST00000517921 RNF123Q5XPI4 1314 aa13.72□□□□□ -0.21
PABPC1-203ENST00000517921 EXOSC9Q06265 439 aaKnown RBP13.72□□□□□ -0.21
PABPC1-203ENST00000517921 BARGINQ6ZT62 677 aa13.72□□□□□ -0.21
PABPC1-203ENST00000517921 SUPT16HQ9Y5B9 1047 aaKnown RBP13.72□□□□□ -0.21
PABPC1-203ENST00000517921 LAMB4A4D0S4 1761 aa13.72□□□□□ -0.21
PABPC1-203ENST00000517921 SBF2Q86WG5 1849 aa13.71□□□□□ -0.21
PABPC1-203ENST00000517921 HSP90AB1P08238 724 aaKnown RBP13.71□□□□□ -0.21
PABPC1-203ENST00000517921 CDCA7Q9BWT1 371 aaPredicted RBP13.71□□□□□ -0.21
PABPC1-203ENST00000517921 CT47B1P0C2W7 299 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-203ENST00000517921 NKX1-1Q15270 411 aaPredicted RBP13.7□□□□□ -0.22
PABPC1-203ENST00000517921 FAM98CQ17RN3 349 aaKnown RBP13.7□□□□□ -0.22
PABPC1-203ENST00000517921 CCDC125Q86Z20 511 aa13.7□□□□□ -0.22
PABPC1-203ENST00000517921 DCAF5Q96JK2 942 aa13.7□□□□□ -0.22
PABPC1-203ENST00000517921 BABAM1Q9NWV8 329 aa13.7□□□□□ -0.22
PABPC1-203ENST00000517921 TSPYL4Q9UJ04 414 aa13.7□□□□□ -0.22
PABPC1-203ENST00000517921 TEFQ10587 303 aa13.69□□□□□ -0.22
PABPC1-203ENST00000517921 TAF7Q15545 349 aaPredicted RBP13.69□□□□□ -0.22
PABPC1-203ENST00000517921 MIS18AQ9NYP9 233 aa13.69□□□□□ -0.22
PABPC1-203ENST00000517921 ONECUT3O60422 494 aaPredicted RBP13.68□□□□□ -0.22
PABPC1-203ENST00000517921 SF3B2Q13435 895 aaKnown RBP13.68□□□□□ -0.22
PABPC1-203ENST00000517921 KRT27Q7Z3Y8 459 aa13.68□□□□□ -0.22
PABPC1-203ENST00000517921 TSPYL6Q8N831 410 aa13.68□□□□□ -0.22
PABPC1-203ENST00000517921 SLC52A2Q9HAB3 445 aa13.68□□□□□ -0.22
PABPC1-203ENST00000517921 RARSP54136 660 aaKnown RBP13.67□□□□□ -0.22
PABPC1-203ENST00000517921 C8orf58Q8NAV2 365 aa13.67□□□□□ -0.22
PABPC1-203ENST00000517921 DDX54Q8TDD1 881 aaKnown RBP13.67□□□□□ -0.22
PABPC1-203ENST00000517921 N4BP2Q86UW6 1770 aaPredicted RBP13.66□□□□□ -0.22
PABPC1-203ENST00000517921 EXOC5O00471 708 aa13.66□□□□□ -0.22
PABPC1-203ENST00000517921 RRP1P56182 461 aaKnown RBP13.66□□□□□ -0.22
PABPC1-203ENST00000517921 DDB1Q16531 1140 aa13.66□□□□□ -0.22
PABPC1-203ENST00000517921 KRT24Q2M2I5 525 aa13.66□□□□□ -0.22
PABPC1-203ENST00000517921 NHSQ6T4R5 1651 aa13.66□□□□□ -0.22
PABPC1-203ENST00000517921 VAMP4O75379 141 aa13.65□□□□□ -0.22
PABPC1-203ENST00000517921 TWISTNBQ3B726 338 aaPredicted RBP13.65□□□□□ -0.22
PABPC1-203ENST00000517921 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
PABPC1-203ENST00000517921 BTAF1O14981 1849 aa13.64□□□□□ -0.23
PABPC1-203ENST00000517921 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
PABPC1-203ENST00000517921 ERVV-2B6SEH9 535 aa13.64□□□□□ -0.23
PABPC1-203ENST00000517921 KCNQ3O43525 872 aa13.64□□□□□ -0.23
PABPC1-203ENST00000517921 BCAR3O75815 825 aa13.64□□□□□ -0.23
PABPC1-203ENST00000517921 ZNF428Q96B54 188 aa13.64□□□□□ -0.23
PABPC1-203ENST00000517921 HEG1Q9ULI3 1381 aa13.63□□□□□ -0.23
PABPC1-203ENST00000517921 CABP4P57796 275 aa13.63□□□□□ -0.23
PABPC1-203ENST00000517921 EIF4A1P60842 406 aaKnown RBP13.63□□□□□ -0.23
PABPC1-203ENST00000517921 NFATC2IPQ8NCF5 419 aa13.63□□□□□ -0.23
PABPC1-203ENST00000517921 GTF3C3Q9Y5Q9 886 aa13.63□□□□□ -0.23
PABPC1-203ENST00000517921 CICQ96RK0 1608 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-203ENST00000517921 ELL2O00472 640 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-203ENST00000517921 NEFLP07196 543 aa13.62□□□□□ -0.23
PABPC1-203ENST00000517921 ALDH1L2Q3SY69 923 aa13.62□□□□□ -0.23
PABPC1-203ENST00000517921 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-203ENST00000517921 SSH1Q8WYL5 1049 aa13.62□□□□□ -0.23
PABPC1-203ENST00000517921 BCL2L13Q9BXK5 485 aa13.62□□□□□ -0.23
PABPC1-203ENST00000517921 SOS1Q07889 1333 aaPredicted RBP13.62□□□□□ -0.23
PABPC1-203ENST00000517921 TJP1Q07157 1748 aa13.61□□□□□ -0.23
PABPC1-203ENST00000517921 PLIN1O60240 522 aa13.61□□□□□ -0.23
PABPC1-203ENST00000517921 IRX6P78412 446 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-203ENST00000517921 SLC39A6Q13433 755 aa13.61□□□□□ -0.23
PABPC1-203ENST00000517921 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
PABPC1-203ENST00000517921 BCL9O00512 1426 aa13.61□□□□□ -0.23
PABPC1-203ENST00000517921 ZNF790Q6PG37 636 aa13.6□□□□□ -0.23
PABPC1-203ENST00000517921 ZNF831Q5JPB2 1677 aa13.59□□□□□ -0.23
PABPC1-203ENST00000517921 HOXB7P09629 217 aa13.59□□□□□ -0.23
PABPC1-203ENST00000517921 BRPF1P55201 1214 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-203ENST00000517921 FAM182BQ5T319 152 aa13.59□□□□□ -0.23
PABPC1-203ENST00000517921 DEFB132Q7Z7B7 95 aa13.59□□□□□ -0.23
PABPC1-203ENST00000517921 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-203ENST00000517921 LY75O60449 1722 aa13.59□□□□□ -0.23
PABPC1-203ENST00000517921 COL5A3P25940 1745 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-203ENST00000517921 BAG6P46379 1132 aa13.58□□□□□ -0.24
PABPC1-203ENST00000517921 FKBP8Q14318 412 aa13.58□□□□□ -0.24
PABPC1-203ENST00000517921 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
PABPC1-203ENST00000517921 TMOD3Q9NYL9 352 aa13.58□□□□□ -0.24
PABPC1-203ENST00000517921 GIGYF1O75420 1035 aaPredicted RBP13.57□□□□□ -0.24
PABPC1-203ENST00000517921 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
PABPC1-203ENST00000517921 PIGBQ92521 554 aa13.57□□□□□ -0.24
PABPC1-203ENST00000517921 EP400Q96L91 3159 aa13.57□□□□□ -0.24
PABPC1-203ENST00000517921 KIF16BQ96L93 1317 aa13.57□□□□□ -0.24
PABPC1-203ENST00000517921 TAF1LQ8IZX4 1826 aa13.57□□□□□ -0.24
PABPC1-203ENST00000517921 TCERG1O14776 1098 aaKnown RBP13.56□□□□□ -0.24
PABPC1-203ENST00000517921 C20orf194Q5TEA3 1177 aa13.56□□□□□ -0.24
PABPC1-203ENST00000517921 FAM196AQ6ZSG2 479 aa13.56□□□□□ -0.24
PABPC1-203ENST00000517921 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
PABPC1-203ENST00000517921 RREB1Q92766 1687 aa13.56□□□□□ -0.24
PABPC1-203ENST00000517921 MYH14Q7Z406 1995 aaKnown RBP13.55□□□□□ -0.24
PABPC1-203ENST00000517921 PRAMEF22A3QJZ6 481 aa13.55□□□□□ -0.24
PABPC1-203ENST00000517921 CANXP27824 592 aaKnown RBP13.55□□□□□ -0.24
PABPC1-203ENST00000517921 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
PABPC1-203ENST00000517921 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
PABPC1-203ENST00000517921 FRAT1Q92837 279 aaPredicted RBP13.55□□□□□ -0.24
PABPC1-203ENST00000517921 FMNL2Q96PY5 1086 aa13.55□□□□□ -0.24
PABPC1-203ENST00000517921 TNNQ9UQP3 1299 aa13.55□□□□□ -0.24
PABPC1-203ENST00000517921 ARFGEF2Q9Y6D5 1785 aa13.55□□□□□ -0.24
PABPC1-203ENST00000517921 NUP188Q5SRE5 1749 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms