RNA–Protein interactions for RNA: ENST00000517484.5

EFCAB13-203, Transcript of EF-hand calcium binding domain 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene EFCAB13, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-203ENST00000517484 USP19O94966 1318 aa12.23□□□□□ -0.45
EFCAB13-203ENST00000517484 A1BGP04217 495 aa12.23□□□□□ -0.45
EFCAB13-203ENST00000517484 SMIM5Q71RC9 77 aa12.23□□□□□ -0.45
EFCAB13-203ENST00000517484 COL3A1P02461 1466 aaPredicted RBP12.23□□□□□ -0.45
EFCAB13-203ENST00000517484 SIL1Q9H173 461 aa12.23□□□□□ -0.45
EFCAB13-203ENST00000517484 TMOD3Q9NYL9 352 aa12.23□□□□□ -0.45
EFCAB13-203ENST00000517484 IL1RAPL2Q9NP60 686 aa12.23□□□□□ -0.45
EFCAB13-203ENST00000517484 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
EFCAB13-203ENST00000517484 EIF4A1P60842 406 aaKnown RBP12.22□□□□□ -0.45
EFCAB13-203ENST00000517484 ALDH1L2Q3SY69 923 aa12.22□□□□□ -0.45
EFCAB13-203ENST00000517484 ZNF790Q6PG37 636 aa12.22□□□□□ -0.45
EFCAB13-203ENST00000517484 COPS6Q7L5N1 327 aa12.22□□□□□ -0.45
EFCAB13-203ENST00000517484 C16orf71Q8IYS4 520 aaPredicted RBP12.22□□□□□ -0.45
EFCAB13-203ENST00000517484 ASAP1Q9ULH1 1129 aa12.22□□□□□ -0.45
EFCAB13-203ENST00000517484 MFAP1P55081 439 aaKnown RBP12.21□□□□□ -0.45
EFCAB13-203ENST00000517484 MAP3K2Q9Y2U5 619 aa12.21□□□□□ -0.45
EFCAB13-203ENST00000517484 SETD1AO15047 1707 aaKnown RBP12.21□□□□□ -0.45
EFCAB13-203ENST00000517484 SRCAPQ6ZRS2 3230 aa12.21□□□□□ -0.46
EFCAB13-203ENST00000517484 UBTFL1P0CB47 393 aaPredicted RBP12.21□□□□□ -0.46
EFCAB13-203ENST00000517484 XAGE3Q8WTP9 111 aa12.21□□□□□ -0.46
EFCAB13-203ENST00000517484 LRRFIP2Q9Y608 721 aaKnown RBP12.21□□□□□ -0.46
EFCAB13-203ENST00000517484 GPTP24298 496 aa12.2□□□□□ -0.46
EFCAB13-203ENST00000517484 MYD88Q99836 296 aa12.2□□□□□ -0.46
EFCAB13-203ENST00000517484 TNS3Q68CZ2 1445 aa12.2□□□□□ -0.46
EFCAB13-203ENST00000517484 SOS2Q07890 1332 aaPredicted RBP12.2□□□□□ -0.46
EFCAB13-203ENST00000517484 CT47B1P0C2W7 299 aaPredicted RBP12.2□□□□□ -0.46
EFCAB13-203ENST00000517484 DDB1Q16531 1140 aa12.2□□□□□ -0.46
EFCAB13-203ENST00000517484 SLC52A2Q9HAB3 445 aa12.2□□□□□ -0.46
EFCAB13-203ENST00000517484 NPHP1O15259 732 aa12.19□□□□□ -0.46
EFCAB13-203ENST00000517484 MAP4K4O95819 1239 aaPredicted RBP12.19□□□□□ -0.46
EFCAB13-203ENST00000517484 SRCIN1Q9C0H9 1055 aa12.19□□□□□ -0.46
EFCAB13-203ENST00000517484 ZBTB7BO15156 539 aaPredicted RBP12.19□□□□□ -0.46
EFCAB13-203ENST00000517484 NBR1Q14596 966 aa12.19□□□□□ -0.46
EFCAB13-203ENST00000517484 WDR17Q8IZU2 1322 aa12.19□□□□□ -0.46
EFCAB13-203ENST00000517484 SURF6O75683 361 aaKnown RBP12.19□□□□□ -0.46
EFCAB13-203ENST00000517484 ZBTB40Q9NUA8 1239 aa12.19□□□□□ -0.46
EFCAB13-203ENST00000517484 BICDL1Q6ZP65 573 aa12.18□□□□□ -0.46
EFCAB13-203ENST00000517484 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
EFCAB13-203ENST00000517484 GIGYF1O75420 1035 aaPredicted RBP12.18□□□□□ -0.46
EFCAB13-203ENST00000517484 USP32Q8NFA0 1604 aa12.18□□□□□ -0.46
EFCAB13-203ENST00000517484 NBPF7P0C2Y1 421 aaPredicted RBP12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 HSPA1LP34931 641 aa12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 DBF4Q9UBU7 674 aaPredicted RBP12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 TBC1D2BQ9UPU7 963 aa12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 GOLGB1Q14789 3259 aaKnown RBP12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 KLHDC4Q8TBB5 520 aa12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 OTUD7AQ8TE49 926 aaPredicted RBP12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 FMNL2Q96PY5 1086 aa12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 TRIM6-TRIM34B2RNG4 842 aa12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 KCNQ2O43526 872 aa12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 NEXNQ0ZGT2 675 aa12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 DNAAF4Q8WXU2 420 aa12.17□□□□□ -0.46
EFCAB13-203ENST00000517484 DNAJC10Q8IXB1 793 aa12.16□□□□□ -0.46
EFCAB13-203ENST00000517484 NALCNQ8IZF0 1738 aa12.16□□□□□ -0.46
EFCAB13-203ENST00000517484 RILPL2Q969X0 211 aa12.16□□□□□ -0.46
EFCAB13-203ENST00000517484 GNAI2P04899 355 aa12.16□□□□□ -0.46
EFCAB13-203ENST00000517484 PA2G4Q9UQ80 394 aaKnown RBP12.16□□□□□ -0.46
EFCAB13-203ENST00000517484 IQSEC2Q5JU85 1478 aa12.15□□□□□ -0.46
EFCAB13-203ENST00000517484 ITSN1Q15811 1721 aa12.15□□□□□ -0.46
EFCAB13-203ENST00000517484 SNRPA1P09661 255 aaKnown RBP12.15□□□□□ -0.46
EFCAB13-203ENST00000517484 USP21Q9UK80 565 aa12.15□□□□□ -0.46
EFCAB13-203ENST00000517484 MSH5O43196 834 aa12.15□□□□□ -0.46
EFCAB13-203ENST00000517484 HTATSF1O43719 755 aaKnown RBP12.15□□□□□ -0.46
EFCAB13-203ENST00000517484 NUTM1Q86Y26 1132 aa12.15□□□□□ -0.46
EFCAB13-203ENST00000517484 TTLL7Q6ZT98 887 aa12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 UBE3BQ7Z3V4 1068 aa12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 CCDC24Q8N4L8 307 aa12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 CARD10Q9BWT7 1032 aa12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 KDRP35968 1356 aa12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 HSP90AB1P08238 724 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 PNMA6EA0A0J9YXQ4 647 aa12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 SEC24BO95487 1268 aa12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 PIGBQ92521 554 aa12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 UPF2Q9HAU5 1272 aaKnown RBP12.14□□□□□ -0.47
EFCAB13-203ENST00000517484 FAM161AQ3B820 660 aa12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 XRN1Q8IZH2 1706 aaKnown RBP12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 CCT4P50991 539 aaKnown RBP12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 ANKRD13DQ6ZTN6 518 aa12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 CHD2O14647 1828 aaKnown RBP12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 PXDNQ92626 1479 aa12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 CRB1P82279 1406 aa12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 CHD1LQ86WJ1 897 aa12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 SIRT2Q8IXJ6 389 aa12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 CHMP4BQ9H444 224 aaKnown RBP12.13□□□□□ -0.47
EFCAB13-203ENST00000517484 PCDH11XQ9BZA7 1347 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 PCDH11YQ9BZA8 1340 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 SHPRHQ149N8 1683 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 HMMRO75330 724 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 PPP1R42Q7Z4L9 355 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 A0A087WZG4 1122 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 CERKQ8TCT0 537 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 PIK3C2AO00443 1686 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 PHF14O94880 888 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 GTF2E1P29083 439 aaPredicted RBP12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 PTF1AQ7RTS3 328 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 FOXD4L1Q9NU39 408 aa12.12□□□□□ -0.47
EFCAB13-203ENST00000517484 KIF20BQ96Q89 1820 aa12.11□□□□□ -0.47
EFCAB13-203ENST00000517484 RTL1A6NKG5 1358 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms