RNA–Protein interactions for RNA: ENST00000517147.1

RNA5SP40-201, Transcript of RNA, 5S ribosomal pseudogene 40, humanhuman

BASIC

Gene RNA5SP40, Length 110 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP40-201ENST00000517147 FXR1P51114 621 aaKnown RBP eCLIP13.71□□□□□ -0.21
RNA5SP40-201ENST00000517147 GRM1Q13255 1194 aa13.71□□□□□ -0.21
RNA5SP40-201ENST00000517147 PALLDQ8WX93 1383 aa13.71□□□□□ -0.22
RNA5SP40-201ENST00000517147 LTBP1Q14766 1721 aa13.7□□□□□ -0.22
RNA5SP40-201ENST00000517147 SLC17A8Q8NDX2 589 aa13.7□□□□□ -0.22
RNA5SP40-201ENST00000517147 NSD3Q9BZ95 1437 aa13.7□□□□□ -0.22
RNA5SP40-201ENST00000517147 CHRNA5P30532 468 aa13.69□□□□□ -0.22
RNA5SP40-201ENST00000517147 DPY19L2Q6NUT2 758 aa13.69□□□□□ -0.22
RNA5SP40-201ENST00000517147 PAXIP1Q6ZW49 1069 aaPredicted RBP13.69□□□□□ -0.22
RNA5SP40-201ENST00000517147 ABT1Q9ULW3 272 aaKnown RBP13.69□□□□□ -0.22
RNA5SP40-201ENST00000517147 C4AP0C0L4 1744 aa13.69□□□□□ -0.22
RNA5SP40-201ENST00000517147 ITGBL1O95965 494 aaPredicted RBP13.68□□□□□ -0.22
RNA5SP40-201ENST00000517147 NFAT5O94916 1531 aa13.68□□□□□ -0.22
RNA5SP40-201ENST00000517147 THSD7BQ9C0I4 1608 aa13.68□□□□□ -0.22
RNA5SP40-201ENST00000517147 HMGB2P26583 209 aaKnown RBP13.67□□□□□ -0.22
RNA5SP40-201ENST00000517147 NBPF15Q8N660 670 aa13.67□□□□□ -0.22
RNA5SP40-201ENST00000517147 ANKRD24Q8TF21 1146 aa13.67□□□□□ -0.22
RNA5SP40-201ENST00000517147 GNPATO15228 680 aa13.66□□□□□ -0.22
RNA5SP40-201ENST00000517147 CAPNS2Q96L46 248 aa13.66□□□□□ -0.22
RNA5SP40-201ENST00000517147 GPR101Q96P66 508 aaPredicted RBP13.66□□□□□ -0.22
RNA5SP40-201ENST00000517147 TMF1P82094 1093 aa13.65□□□□□ -0.22
RNA5SP40-201ENST00000517147 LDHDQ86WU2 507 aa13.65□□□□□ -0.22
RNA5SP40-201ENST00000517147 LINC00116Q8NCU8 138 aa13.65□□□□□ -0.22
RNA5SP40-201ENST00000517147 PARP3Q9Y6F1 533 aa13.65□□□□□ -0.22
RNA5SP40-201ENST00000517147 SRPK2P78362 688 aaKnown RBP13.64□□□□□ -0.23
RNA5SP40-201ENST00000517147 CYP4F22Q6NT55 531 aa13.64□□□□□ -0.23
RNA5SP40-201ENST00000517147 NLGN1Q8N2Q7 840 aa13.64□□□□□ -0.23
RNA5SP40-201ENST00000517147 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
RNA5SP40-201ENST00000517147 CENPBP07199 599 aaPredicted RBP13.63□□□□□ -0.23
RNA5SP40-201ENST00000517147 CABP1Q9NZU7 370 aa13.63□□□□□ -0.23
RNA5SP40-201ENST00000517147 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
RNA5SP40-201ENST00000517147 CUL9Q8IWT3 2517 aa13.62□□□□□ -0.23
RNA5SP40-201ENST00000517147 A0A0C4DFX4 3053 aa13.62□□□□□ -0.23
RNA5SP40-201ENST00000517147 AOC2O75106 756 aa13.62□□□□□ -0.23
RNA5SP40-201ENST00000517147 DDNO94850 711 aaPredicted RBP13.62□□□□□ -0.23
RNA5SP40-201ENST00000517147 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
RNA5SP40-201ENST00000517147 ZCRB1Q8TBF4 217 aaKnown RBP13.62□□□□□ -0.23
RNA5SP40-201ENST00000517147 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
RNA5SP40-201ENST00000517147 EAPPQ56P03 285 aaPredicted RBP13.61□□□□□ -0.23
RNA5SP40-201ENST00000517147 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
RNA5SP40-201ENST00000517147 LTN1O94822 1766 aa13.6□□□□□ -0.23
RNA5SP40-201ENST00000517147 ECE1P42892 770 aa13.6□□□□□ -0.23
RNA5SP40-201ENST00000517147 ADAMTS7Q9UKP4 1686 aa13.59□□□□□ -0.23
RNA5SP40-201ENST00000517147 NFKBIEO00221 500 aa13.59□□□□□ -0.23
RNA5SP40-201ENST00000517147 LTV1Q96GA3 475 aaPredicted RBP13.59□□□□□ -0.23
RNA5SP40-201ENST00000517147 TTC21BQ7Z4L5 1316 aa13.59□□□□□ -0.23
RNA5SP40-201ENST00000517147 ERFEQ4G0M1 354 aa13.58□□□□□ -0.24
RNA5SP40-201ENST00000517147 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
RNA5SP40-201ENST00000517147 TAF1DQ9H5J8 278 aaPredicted RBP13.58□□□□□ -0.24
RNA5SP40-201ENST00000517147 CA12O43570 354 aa13.57□□□□□ -0.24
RNA5SP40-201ENST00000517147 GYS1P13807 737 aa13.57□□□□□ -0.24
RNA5SP40-201ENST00000517147 NBPF1Q3BBV0 1214 aa13.57□□□□□ -0.24
RNA5SP40-201ENST00000517147 TRAPPC3LQ5T215 181 aa13.57□□□□□ -0.24
RNA5SP40-201ENST00000517147 DICER1Q9UPY3 1922 aaKnown RBP13.56□□□□□ -0.24
RNA5SP40-201ENST00000517147 ITPK1Q13572 414 aa13.56□□□□□ -0.24
RNA5SP40-201ENST00000517147 CNTROBQ8N137 903 aa13.56□□□□□ -0.24
RNA5SP40-201ENST00000517147 SMARCC1Q92922 1105 aaPredicted RBP13.56□□□□□ -0.24
RNA5SP40-201ENST00000517147 KDM2AQ9Y2K7 1162 aa13.56□□□□□ -0.24
RNA5SP40-201ENST00000517147 MAP2P11137 1827 aaKnown RBP13.55□□□□□ -0.24
RNA5SP40-201ENST00000517147 MEGF6O75095 1541 aa13.55□□□□□ -0.24
RNA5SP40-201ENST00000517147 SZT2Q5T011 3432 aa13.55□□□□□ -0.24
RNA5SP40-201ENST00000517147 FMR1Q06787 632 aaKnown RBP eCLIP13.55□□□□□ -0.24
RNA5SP40-201ENST00000517147 LOC102724428A0A0B4J2F2 783 aa13.54□□□□□ -0.24
RNA5SP40-201ENST00000517147 IQCA1LA6NCM1 817 aa13.54□□□□□ -0.24
RNA5SP40-201ENST00000517147 MAP2K2P36507 400 aa13.54□□□□□ -0.24
RNA5SP40-201ENST00000517147 SIK1P57059 783 aa13.54□□□□□ -0.24
RNA5SP40-201ENST00000517147 ARHGEF1Q92888 912 aaKnown RBP13.54□□□□□ -0.24
RNA5SP40-201ENST00000517147 ITGB4P16144 1822 aa13.54□□□□□ -0.24
RNA5SP40-201ENST00000517147 SCN4AP35499 1836 aa13.54□□□□□ -0.24
RNA5SP40-201ENST00000517147 RTCBQ9Y3I0 505 aaKnown RBP13.53□□□□□ -0.24
RNA5SP40-201ENST00000517147 RGPD2P0DJD1 1756 aa13.53□□□□□ -0.24
RNA5SP40-201ENST00000517147 DDR1Q08345 913 aa13.52□□□□□ -0.25
RNA5SP40-201ENST00000517147 DDX21Q9NR30 783 aaKnown RBP eCLIP13.52□□□□□ -0.25
RNA5SP40-201ENST00000517147 ADAMTSL1Q8N6G6 1762 aa13.51□□□□□ -0.25
RNA5SP40-201ENST00000517147 FAM208AQ9UK61 1670 aaKnown RBP13.51□□□□□ -0.25
RNA5SP40-201ENST00000517147 RFC4P35249 363 aa13.51□□□□□ -0.25
RNA5SP40-201ENST00000517147 ATP6V1AP38606 617 aa13.51□□□□□ -0.25
RNA5SP40-201ENST00000517147 TTC21AQ8NDW8 1320 aa13.5□□□□□ -0.25
RNA5SP40-201ENST00000517147 CIAPIN1Q6FI81 312 aa13.5□□□□□ -0.25
RNA5SP40-201ENST00000517147 PIGBQ92521 554 aa13.5□□□□□ -0.25
RNA5SP40-201ENST00000517147 BRPF1P55201 1214 aaPredicted RBP13.48□□□□□ -0.25
RNA5SP40-201ENST00000517147 DIEXFQ68CQ4 756 aaKnown RBP13.48□□□□□ -0.25
RNA5SP40-201ENST00000517147 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
RNA5SP40-201ENST00000517147 L3MBTL3Q96JM7 780 aaPredicted RBP13.48□□□□□ -0.25
RNA5SP40-201ENST00000517147 COLQQ9Y215 455 aaPredicted RBP13.48□□□□□ -0.25
RNA5SP40-201ENST00000517147 EPHX2P34913 555 aa13.47□□□□□ -0.25
RNA5SP40-201ENST00000517147 FKBP8Q14318 412 aa13.47□□□□□ -0.25
RNA5SP40-201ENST00000517147 MPNDQ8N594 471 aa13.47□□□□□ -0.25
RNA5SP40-201ENST00000517147 HACL1Q9UJ83 578 aa13.47□□□□□ -0.25
RNA5SP40-201ENST00000517147 HPS5Q9UPZ3 1129 aa13.47□□□□□ -0.25
RNA5SP40-201ENST00000517147 TLL2Q9Y6L7 1015 aa13.47□□□□□ -0.25
RNA5SP40-201ENST00000517147 COL6A3P12111 3177 aa13.47□□□□□ -0.25
RNA5SP40-201ENST00000517147 CST9Q5W186 159 aa13.46□□□□□ -0.25
RNA5SP40-201ENST00000517147 MPHOSPH9Q99550 1183 aa13.46□□□□□ -0.25
RNA5SP40-201ENST00000517147 SRP68Q9UHB9 627 aaKnown RBP13.46□□□□□ -0.25
RNA5SP40-201ENST00000517147 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
RNA5SP40-201ENST00000517147 MKI67P46013 3256 aaKnown RBP13.45□□□□□ -0.26
RNA5SP40-201ENST00000517147 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.45□□□□□ -0.26
RNA5SP40-201ENST00000517147 DCAF11Q8TEB1 546 aa13.45□□□□□ -0.26
RNA5SP40-201ENST00000517147 ASAP1Q9ULH1 1129 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms