RNA–Protein interactions for RNA: ENST00000516600.1

SCARNA21.2-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 166 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21.2-201ENST00000516600 UBR3Q6ZT12 1888 aa8.53□□□□□ -1.04
SCARNA21.2-201ENST00000516600 LTBP1Q14766 1721 aa8.52□□□□□ -1.05
SCARNA21.2-201ENST00000516600 THSD7BQ9C0I4 1608 aa8.52□□□□□ -1.05
SCARNA21.2-201ENST00000516600 CA12O43570 354 aa8.52□□□□□ -1.05
SCARNA21.2-201ENST00000516600 ITGAEP38570 1179 aa8.52□□□□□ -1.05
SCARNA21.2-201ENST00000516600 ECE1P42892 770 aa8.52□□□□□ -1.05
SCARNA21.2-201ENST00000516600 LDHDQ86WU2 507 aa8.52□□□□□ -1.05
SCARNA21.2-201ENST00000516600 KCNH5Q8NCM2 988 aa8.52□□□□□ -1.05
SCARNA21.2-201ENST00000516600 CDK19Q9BWU1 502 aa8.52□□□□□ -1.05
SCARNA21.2-201ENST00000516600 CAPNS2Q96L46 248 aa8.51□□□□□ -1.05
SCARNA21.2-201ENST00000516600 GPR101Q96P66 508 aaPredicted RBP8.51□□□□□ -1.05
SCARNA21.2-201ENST00000516600 PALLDQ8WX93 1383 aa8.5□□□□□ -1.05
SCARNA21.2-201ENST00000516600 SLC4A1APQ9BWU0 796 aaKnown RBP8.5□□□□□ -1.05
SCARNA21.2-201ENST00000516600 ADAMTS7Q9UKP4 1686 aa8.49□□□□□ -1.05
SCARNA21.2-201ENST00000516600 ADGRB1O14514 1584 aa8.49□□□□□ -1.05
SCARNA21.2-201ENST00000516600 ITGBL1O95965 494 aaPredicted RBP8.49□□□□□ -1.05
SCARNA21.2-201ENST00000516600 NLGN1Q8N2Q7 840 aa8.49□□□□□ -1.05
SCARNA21.2-201ENST00000516600 PARP3Q9Y6F1 533 aa8.49□□□□□ -1.05
SCARNA21.2-201ENST00000516600 C4AP0C0L4 1744 aa8.49□□□□□ -1.05
SCARNA21.2-201ENST00000516600 IQCA1LA6NCM1 817 aa8.48□□□□□ -1.05
SCARNA21.2-201ENST00000516600 GNPATO15228 680 aa8.48□□□□□ -1.05
SCARNA21.2-201ENST00000516600 TMF1P82094 1093 aa8.48□□□□□ -1.05
SCARNA21.2-201ENST00000516600 CHRNA5P30532 468 aa8.47□□□□□ -1.05
SCARNA21.2-201ENST00000516600 CYP4F22Q6NT55 531 aa8.47□□□□□ -1.05
SCARNA21.2-201ENST00000516600 MAP2K2P36507 400 aa8.46□□□□□ -1.06
SCARNA21.2-201ENST00000516600 EAPPQ56P03 285 aaPredicted RBP8.46□□□□□ -1.06
SCARNA21.2-201ENST00000516600 ANKRD24Q8TF21 1146 aa8.46□□□□□ -1.06
SCARNA21.2-201ENST00000516600 CLEC11AQ9Y240 323 aa8.46□□□□□ -1.06
SCARNA21.2-201ENST00000516600 CCDC88AQ3V6T2 1871 aa8.46□□□□□ -1.06
SCARNA21.2-201ENST00000516600 NFAT5O94916 1531 aa8.45□□□□□ -1.06
SCARNA21.2-201ENST00000516600 ERFEQ4G0M1 354 aa8.45□□□□□ -1.06
SCARNA21.2-201ENST00000516600 MPNDQ8N594 471 aa8.45□□□□□ -1.06
SCARNA21.2-201ENST00000516600 SMARCC1Q92922 1105 aaPredicted RBP8.45□□□□□ -1.06
SCARNA21.2-201ENST00000516600 AOC2O75106 756 aa8.44□□□□□ -1.06
SCARNA21.2-201ENST00000516600 DDNO94850 711 aaPredicted RBP8.44□□□□□ -1.06
SCARNA21.2-201ENST00000516600 MNX1P50219 401 aaPredicted RBP8.44□□□□□ -1.06
SCARNA21.2-201ENST00000516600 CNTROBQ8N137 903 aa8.44□□□□□ -1.06
SCARNA21.2-201ENST00000516600 ZCRB1Q8TBF4 217 aaKnown RBP8.44□□□□□ -1.06
SCARNA21.2-201ENST00000516600 TAF1DQ9H5J8 278 aaPredicted RBP8.44□□□□□ -1.06
SCARNA21.2-201ENST00000516600 BRPF1P55201 1214 aaPredicted RBP8.43□□□□□ -1.06
SCARNA21.2-201ENST00000516600 SRPK2P78362 688 aaKnown RBP8.43□□□□□ -1.06
SCARNA21.2-201ENST00000516600 NBPF1Q3BBV0 1214 aa8.43□□□□□ -1.06
SCARNA21.2-201ENST00000516600 MPRIPQ6WCQ1 1025 aa8.43□□□□□ -1.06
SCARNA21.2-201ENST00000516600 LINC00116Q8NCU8 138 aa8.43□□□□□ -1.06
SCARNA21.2-201ENST00000516600 TRIOBPQ9H2D6 2365 aa8.43□□□□□ -1.06
SCARNA21.2-201ENST00000516600 SZT2Q5T011 3432 aa8.42□□□□□ -1.06
SCARNA21.2-201ENST00000516600 NFKBIEO00221 500 aa8.42□□□□□ -1.06
SCARNA21.2-201ENST00000516600 TRAPPC3LQ5T215 181 aa8.42□□□□□ -1.06
SCARNA21.2-201ENST00000516600 MAP1SQ66K74 1059 aaPredicted RBP8.42□□□□□ -1.06
SCARNA21.2-201ENST00000516600 DDX21Q9NR30 783 aaKnown RBP eCLIP8.42□□□□□ -1.06
SCARNA21.2-201ENST00000516600 SCN4AP35499 1836 aa8.42□□□□□ -1.06
SCARNA21.2-201ENST00000516600 GYS1P13807 737 aa8.41□□□□□ -1.06
SCARNA21.2-201ENST00000516600 RTCBQ9Y3I0 505 aaKnown RBP8.41□□□□□ -1.06
SCARNA21.2-201ENST00000516600 LOC102724428A0A0B4J2F2 783 aa8.4□□□□□ -1.06
SCARNA21.2-201ENST00000516600 SIK1P57059 783 aa8.4□□□□□ -1.06
SCARNA21.2-201ENST00000516600 CIAPIN1Q6FI81 312 aa8.4□□□□□ -1.06
SCARNA21.2-201ENST00000516600 L3MBTL3Q96JM7 780 aaPredicted RBP8.4□□□□□ -1.06
SCARNA21.2-201ENST00000516600 CABP1Q9NZU7 370 aa8.4□□□□□ -1.06
SCARNA21.2-201ENST00000516600 HPS5Q9UPZ3 1129 aa8.4□□□□□ -1.06
SCARNA21.2-201ENST00000516600 MEGF6O75095 1541 aa8.39□□□□□ -1.07
SCARNA21.2-201ENST00000516600 DICER1Q9UPY3 1922 aaKnown RBP8.39□□□□□ -1.07
SCARNA21.2-201ENST00000516600 RFC4P35249 363 aa8.39□□□□□ -1.07
SCARNA21.2-201ENST00000516600 PNMA8AQ86V59 439 aaPredicted RBP8.39□□□□□ -1.07
SCARNA21.2-201ENST00000516600 TTLL6Q8N841 843 aa8.39□□□□□ -1.07
SCARNA21.2-201ENST00000516600 HACL1Q9UJ83 578 aa8.39□□□□□ -1.07
SCARNA21.2-201ENST00000516600 COLQQ9Y215 455 aaPredicted RBP8.39□□□□□ -1.07
SCARNA21.2-201ENST00000516600 LTN1O94822 1766 aa8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 TTC21BQ7Z4L5 1316 aa8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 FAM208AQ9UK61 1670 aaKnown RBP8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 ADRA2BP18089 450 aa8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 EPHX2P34913 555 aa8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 CTU1Q7Z7A3 348 aaKnown RBP8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 LTV1Q96GA3 475 aaPredicted RBP8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 CABP2Q9NPB3 220 aa8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 TLL2Q9Y6L7 1015 aa8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 ADAMTSL1Q8N6G6 1762 aa8.38□□□□□ -1.07
SCARNA21.2-201ENST00000516600 COL6A3P12111 3177 aa8.37□□□□□ -1.07
SCARNA21.2-201ENST00000516600 TTC21AQ8NDW8 1320 aa8.37□□□□□ -1.07
SCARNA21.2-201ENST00000516600 ATP6V1AP38606 617 aa8.37□□□□□ -1.07
SCARNA21.2-201ENST00000516600 ITPK1Q13572 414 aa8.37□□□□□ -1.07
SCARNA21.2-201ENST00000516600 ARHGEF1Q92888 912 aaKnown RBP8.37□□□□□ -1.07
SCARNA21.2-201ENST00000516600 DDR1Q08345 913 aa8.36□□□□□ -1.07
SCARNA21.2-201ENST00000516600 MAP2P11137 1827 aaKnown RBP8.36□□□□□ -1.07
SCARNA21.2-201ENST00000516600 CEP290O15078 2479 aa8.35□□□□□ -1.07
SCARNA21.2-201ENST00000516600 AKAP4Q5JQC9 854 aa8.35□□□□□ -1.07
SCARNA21.2-201ENST00000516600 TAOK3Q9H2K8 898 aa8.35□□□□□ -1.07
SCARNA21.2-201ENST00000516600 PCDH11XQ9BZA7 1347 aa8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 PCDH11YQ9BZA8 1340 aa8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 FMR1Q06787 632 aaKnown RBP eCLIP8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 NOGQ13253 232 aa8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 PKN2Q16513 984 aaKnown RBP8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 PIGBQ92521 554 aa8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 SAGE1Q9NXZ1 904 aa8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 DLEC1Q9Y238 1755 aa8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 MKI67P46013 3256 aaKnown RBP8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 SMG6Q86US8 1419 aaKnown RBP8.34□□□□□ -1.07
SCARNA21.2-201ENST00000516600 ITGB4P16144 1822 aa8.33□□□□□ -1.08
SCARNA21.2-201ENST00000516600 CGNL1Q0VF96 1302 aa8.33□□□□□ -1.08
SCARNA21.2-201ENST00000516600 LTBP3Q9NS15 1303 aa8.33□□□□□ -1.08
SCARNA21.2-201ENST00000516600 FKBP8Q14318 412 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.8 ms