RNA–Protein interactions for RNA: ENST00000516546.1

RN7SKP287-201, Transcript of RNA, 7SK small nuclear pseudogene 287, humanhuman

BASIC

Gene RN7SKP287, Length 266 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP287-201ENST00000516546 USP17L4A6NCW7 530 aa10.11□□□□□ -0.79
RN7SKP287-201ENST00000516546 GTF2IP78347 998 aa10.11□□□□□ -0.79
RN7SKP287-201ENST00000516546 USP17L2Q6R6M4 530 aa10.11□□□□□ -0.79
RN7SKP287-201ENST00000516546 USP17L1Q7RTZ2 530 aa10.11□□□□□ -0.79
RN7SKP287-201ENST00000516546 PLEKHM2Q8IWE5 1019 aa10.11□□□□□ -0.79
RN7SKP287-201ENST00000516546 TMEM229AB2RXF0 380 aa10.1□□□□□ -0.79
RN7SKP287-201ENST00000516546 GTF2E1P29083 439 aaPredicted RBP10.1□□□□□ -0.79
RN7SKP287-201ENST00000516546 GNASQ5JWF2 1037 aa10.1□□□□□ -0.79
RN7SKP287-201ENST00000516546 RIPOR1Q6ZS17 1223 aa10.1□□□□□ -0.79
RN7SKP287-201ENST00000516546 PPARGC1BQ86YN6 1023 aaKnown RBP10.1□□□□□ -0.79
RN7SKP287-201ENST00000516546 GAS2L1Q99501 681 aaPredicted RBP10.1□□□□□ -0.79
RN7SKP287-201ENST00000516546 PHKA2P46019 1235 aa10.09□□□□□ -0.79
RN7SKP287-201ENST00000516546 COL25A1Q9BXS0 654 aaPredicted RBP10.09□□□□□ -0.79
RN7SKP287-201ENST00000516546 LORP23490 312 aaPredicted RBP10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 SMTNP53814 917 aa10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 KRT76Q01546 638 aa10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 PSME1Q06323 249 aa10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 C4orf17Q53FE4 359 aa10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 TRIM22Q8IYM9 498 aa10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 RHBDD1Q8TEB9 315 aa10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 ZNF837Q96EG3 531 aaPredicted RBP10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 CALR3Q96L12 384 aaKnown RBP10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 SERTAD1Q9UHV2 236 aa10.08□□□□□ -0.8
RN7SKP287-201ENST00000516546 F11P03951 625 aa10.07□□□□□ -0.8
RN7SKP287-201ENST00000516546 DBN1Q16643 649 aa10.07□□□□□ -0.8
RN7SKP287-201ENST00000516546 TRIM50Q86XT4 487 aa10.07□□□□□ -0.8
RN7SKP287-201ENST00000516546 ZSCAN1Q8NBB4 408 aa10.07□□□□□ -0.8
RN7SKP287-201ENST00000516546 GMCL1Q96IK5 515 aa10.07□□□□□ -0.8
RN7SKP287-201ENST00000516546 SLC4A9Q96Q91 983 aa10.07□□□□□ -0.8
RN7SKP287-201ENST00000516546 A0A1B0GTH6 734 aa10.06□□□□□ -0.8
RN7SKP287-201ENST00000516546 RNFT1Q5M7Z0 435 aa10.06□□□□□ -0.8
RN7SKP287-201ENST00000516546 CNTNAP3BQ96NU0 1288 aa10.06□□□□□ -0.8
RN7SKP287-201ENST00000516546 CNTNAP3Q9BZ76 1288 aa10.06□□□□□ -0.8
RN7SKP287-201ENST00000516546 TFIP11Q9UBB9 837 aaKnown RBP10.06□□□□□ -0.8
RN7SKP287-201ENST00000516546 STK17AQ9UEE5 414 aa10.06□□□□□ -0.8
RN7SKP287-201ENST00000516546 H7C1W4 665 aa10.05□□□□□ -0.8
RN7SKP287-201ENST00000516546 CLDN10P78369 228 aa10.05□□□□□ -0.8
RN7SKP287-201ENST00000516546 MAFBQ9Y5Q3 323 aaPredicted RBP10.05□□□□□ -0.8
RN7SKP287-201ENST00000516546 A6NJY4 79 aa10.04□□□□□ -0.8
RN7SKP287-201ENST00000516546 ATP1A2P50993 1020 aa10.04□□□□□ -0.8
RN7SKP287-201ENST00000516546 MTFR1Q15390 333 aa10.04□□□□□ -0.8
RN7SKP287-201ENST00000516546 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.04□□□□□ -0.8
RN7SKP287-201ENST00000516546 GPAMQ9HCL2 828 aa10.04□□□□□ -0.8
RN7SKP287-201ENST00000516546 ZNF358Q9NW07 568 aa10.04□□□□□ -0.8
RN7SKP287-201ENST00000516546 MKRN1Q9UHC7 482 aaKnown RBP10.04□□□□□ -0.8
RN7SKP287-201ENST00000516546 KIAA1024Q9UPX6 916 aa10.04□□□□□ -0.8
RN7SKP287-201ENST00000516546 PALM3A6NDB9 673 aaPredicted RBP10.03□□□□□ -0.8
RN7SKP287-201ENST00000516546 BACH1O14867 736 aa10.03□□□□□ -0.8
RN7SKP287-201ENST00000516546 ZBTB7BO15156 539 aaPredicted RBP10.03□□□□□ -0.8
RN7SKP287-201ENST00000516546 TPCN2Q8NHX9 752 aa10.03□□□□□ -0.8
RN7SKP287-201ENST00000516546 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
RN7SKP287-201ENST00000516546 PPP1R12CQ9BZL4 782 aa10.03□□□□□ -0.8
RN7SKP287-201ENST00000516546 ZNF777Q9ULD5 760 aaPredicted RBP10.03□□□□□ -0.8
RN7SKP287-201ENST00000516546 IQSEC3Q9UPP2 1182 aaPredicted RBP10.03□□□□□ -0.8
RN7SKP287-201ENST00000516546 CDK2AP1O14519 115 aa10.02□□□□□ -0.81
RN7SKP287-201ENST00000516546 PLA2G4AP47712 749 aa10.02□□□□□ -0.81
RN7SKP287-201ENST00000516546 FOXR1Q6PIV2 292 aa10.02□□□□□ -0.81
RN7SKP287-201ENST00000516546 ZNF295-AS1Q8N0V1 137 aa10.02□□□□□ -0.81
RN7SKP287-201ENST00000516546 OGFOD1Q8N543 542 aa10.02□□□□□ -0.81
RN7SKP287-201ENST00000516546 NUCKS1Q9H1E3 243 aaKnown RBP10.02□□□□□ -0.81
RN7SKP287-201ENST00000516546 DNAAF2Q9NVR5 837 aaKnown RBP10.02□□□□□ -0.81
RN7SKP287-201ENST00000516546 USP3Q9Y6I4 520 aa10.02□□□□□ -0.81
RN7SKP287-201ENST00000516546 GPR25O00155 361 aa10.01□□□□□ -0.81
RN7SKP287-201ENST00000516546 MSX1P28360 303 aa10.01□□□□□ -0.81
RN7SKP287-201ENST00000516546 GAS6Q14393 721 aa10.01□□□□□ -0.81
RN7SKP287-201ENST00000516546 CCDC102BQ68D86 513 aa10.01□□□□□ -0.81
RN7SKP287-201ENST00000516546 GTPBP3Q969Y2 492 aaKnown RBP10.01□□□□□ -0.81
RN7SKP287-201ENST00000516546 LARGE2Q8N3Y3 721 aa10□□□□□ -0.81
RN7SKP287-201ENST00000516546 SCHIP1Q9P0W5 487 aaPredicted RBP10□□□□□ -0.81
RN7SKP287-201ENST00000516546 GTF3C3Q9Y5Q9 886 aa10□□□□□ -0.81
RN7SKP287-201ENST00000516546 THBS1P07996 1170 aa9.99□□□□□ -0.81
RN7SKP287-201ENST00000516546 EPHA4P54764 986 aa9.99□□□□□ -0.81
RN7SKP287-201ENST00000516546 ZNF594Q96JF6 807 aaPredicted RBP9.99□□□□□ -0.81
RN7SKP287-201ENST00000516546 RUBCNLQ9H714 662 aa9.99□□□□□ -0.81
RN7SKP287-201ENST00000516546 CSB-PGBD3P0DP91 1061 aa9.98□□□□□ -0.81
RN7SKP287-201ENST00000516546 TNS4Q8IZW8 715 aa9.98□□□□□ -0.81
RN7SKP287-201ENST00000516546 SIX5Q8N196 739 aa9.98□□□□□ -0.81
RN7SKP287-201ENST00000516546 PGBD3Q8N328 593 aa9.98□□□□□ -0.81
RN7SKP287-201ENST00000516546 TRERF1Q96PN7 1200 aa9.98□□□□□ -0.81
RN7SKP287-201ENST00000516546 FAM181BA6NEQ2 426 aa9.97□□□□□ -0.81
RN7SKP287-201ENST00000516546 SLURP2P0DP57 97 aa9.97□□□□□ -0.81
RN7SKP287-201ENST00000516546 RASA1P20936 1047 aa9.97□□□□□ -0.81
RN7SKP287-201ENST00000516546 FOXK2Q01167 660 aa9.97□□□□□ -0.81
RN7SKP287-201ENST00000516546 AIDAQ96BJ3 306 aa9.97□□□□□ -0.81
RN7SKP287-201ENST00000516546 CABP1Q9NZU7 370 aa9.97□□□□□ -0.81
RN7SKP287-201ENST00000516546 DKK1O94907 266 aa9.96□□□□□ -0.82
RN7SKP287-201ENST00000516546 ATP4AP20648 1035 aa9.96□□□□□ -0.82
RN7SKP287-201ENST00000516546 LMOD1P29536 600 aaPredicted RBP9.96□□□□□ -0.82
RN7SKP287-201ENST00000516546 LBRQ14739 615 aaKnown RBP9.96□□□□□ -0.82
RN7SKP287-201ENST00000516546 C1orf216Q8TAB5 229 aa9.96□□□□□ -0.82
RN7SKP287-201ENST00000516546 ZMYND15Q9H091 742 aa9.96□□□□□ -0.82
RN7SKP287-201ENST00000516546 CRISPLD1Q9H336 500 aa9.96□□□□□ -0.82
RN7SKP287-201ENST00000516546 SRSF11Q05519 484 aaKnown RBP9.95□□□□□ -0.82
RN7SKP287-201ENST00000516546 UBAP2LQ14157 1087 aaKnown RBP9.95□□□□□ -0.82
RN7SKP287-201ENST00000516546 NBPF1Q3BBV0 1214 aa9.95□□□□□ -0.82
RN7SKP287-201ENST00000516546 EFHC2Q5JST6 749 aa9.95□□□□□ -0.82
RN7SKP287-201ENST00000516546 KANK4Q5T7N3 995 aaPredicted RBP9.95□□□□□ -0.82
RN7SKP287-201ENST00000516546 MBIPQ9NS73 344 aa9.95□□□□□ -0.82
RN7SKP287-201ENST00000516546 M0R2N6 131 aa9.94□□□□□ -0.82
RN7SKP287-201ENST00000516546 ADAMTS2O95450 1211 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms