RNA–Protein interactions for RNA: ENST00000516133.1

SCARNA16.1-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 183 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.1-201ENST00000516133 RNMTO43148 476 aaKnown RBP14.96□□□□□ -0.01
SCARNA16.1-201ENST00000516133 PRKAR2BP31323 418 aa14.96□□□□□ -0.01
SCARNA16.1-201ENST00000516133 RSPH6AQ9H0K4 717 aa14.96□□□□□ -0.01
SCARNA16.1-201ENST00000516133 SLC52A2Q9HAB3 445 aa14.96□□□□□ -0.01
SCARNA16.1-201ENST00000516133 LGR6Q9HBX8 967 aa14.96□□□□□ -0.01
SCARNA16.1-201ENST00000516133 GNAT3A8MTJ3 354 aa14.95□□□□□ -0.02
SCARNA16.1-201ENST00000516133 PTGER2P43116 358 aa14.95□□□□□ -0.02
SCARNA16.1-201ENST00000516133 AK7Q96M32 723 aa14.95□□□□□ -0.02
SCARNA16.1-201ENST00000516133 RBM42Q9BTD8 480 aaKnown RBP14.95□□□□□ -0.02
SCARNA16.1-201ENST00000516133 CASZ1Q86V15 1759 aa14.94□□□□□ -0.02
SCARNA16.1-201ENST00000516133 MSH5O43196 834 aa14.94□□□□□ -0.02
SCARNA16.1-201ENST00000516133 PHACTR3Q96KR7 559 aa14.94□□□□□ -0.02
SCARNA16.1-201ENST00000516133 NEFMP07197 916 aa14.93□□□□□ -0.02
SCARNA16.1-201ENST00000516133 ITPK1Q13572 414 aa14.93□□□□□ -0.02
SCARNA16.1-201ENST00000516133 COL23A1Q86Y22 540 aaPredicted RBP14.93□□□□□ -0.02
SCARNA16.1-201ENST00000516133 PTCD1O75127 700 aaKnown RBP14.92□□□□□ -0.02
SCARNA16.1-201ENST00000516133 LINC00116Q8NCU8 138 aa14.92□□□□□ -0.02
SCARNA16.1-201ENST00000516133 SGIP1Q9BQI5 828 aa14.92□□□□□ -0.02
SCARNA16.1-201ENST00000516133 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
SCARNA16.1-201ENST00000516133 MAP3K5Q99683 1374 aa14.92□□□□□ -0.02
SCARNA16.1-201ENST00000516133 SSFA2P28290 1259 aa14.91□□□□□ -0.02
SCARNA16.1-201ENST00000516133 POLD1P28340 1107 aa14.91□□□□□ -0.02
SCARNA16.1-201ENST00000516133 TEFQ10587 303 aa14.91□□□□□ -0.02
SCARNA16.1-201ENST00000516133 RC3H1Q5TC82 1133 aaKnown RBP14.91□□□□□ -0.02
SCARNA16.1-201ENST00000516133 IL17REQ8NFR9 667 aa14.91□□□□□ -0.02
SCARNA16.1-201ENST00000516133 SLC4A9Q96Q91 983 aa14.91□□□□□ -0.02
SCARNA16.1-201ENST00000516133 ARXQ96QS3 562 aa14.91□□□□□ -0.02
SCARNA16.1-201ENST00000516133 RTF1Q92541 710 aaKnown RBP14.9□□□□□ -0.02
SCARNA16.1-201ENST00000516133 SCN11AQ9UI33 1791 aa14.9□□□□□ -0.02
SCARNA16.1-201ENST00000516133 C5P01031 1676 aa14.9□□□□□ -0.02
SCARNA16.1-201ENST00000516133 MYBBP1AQ9BQG0 1328 aaKnown RBP14.9□□□□□ -0.02
SCARNA16.1-201ENST00000516133 QSER1Q2KHR3 1735 aa14.89□□□□□ -0.03
SCARNA16.1-201ENST00000516133 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.89□□□□□ -0.03
SCARNA16.1-201ENST00000516133 GNPATO15228 680 aa14.89□□□□□ -0.03
SCARNA16.1-201ENST00000516133 TAF1LQ8IZX4 1826 aa14.89□□□□□ -0.03
SCARNA16.1-201ENST00000516133 HTATSF1O43719 755 aaKnown RBP14.88□□□□□ -0.03
SCARNA16.1-201ENST00000516133 TRAPPC3LQ5T215 181 aa14.88□□□□□ -0.03
SCARNA16.1-201ENST00000516133 RTCBQ9Y3I0 505 aaKnown RBP14.88□□□□□ -0.03
SCARNA16.1-201ENST00000516133 C4BP0C0L5 1744 aa14.88□□□□□ -0.03
SCARNA16.1-201ENST00000516133 CNTNAP4Q9C0A0 1308 aa14.88□□□□□ -0.03
SCARNA16.1-201ENST00000516133 ZNF316A6NFI3 1004 aaPredicted RBP14.87□□□□□ -0.03
SCARNA16.1-201ENST00000516133 PHF14O94880 888 aa14.87□□□□□ -0.03
SCARNA16.1-201ENST00000516133 SLC39A6Q13433 755 aa14.87□□□□□ -0.03
SCARNA16.1-201ENST00000516133 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
SCARNA16.1-201ENST00000516133 VSIG10Q8N0Z9 540 aa14.87□□□□□ -0.03
SCARNA16.1-201ENST00000516133 DCAF8L1A6NGE4 600 aa14.86□□□□□ -0.03
SCARNA16.1-201ENST00000516133 RPS6KA4O75676 772 aa14.86□□□□□ -0.03
SCARNA16.1-201ENST00000516133 ADRA2BP18089 450 aa14.86□□□□□ -0.03
SCARNA16.1-201ENST00000516133 AMIGO3Q86WK7 504 aa14.86□□□□□ -0.03
SCARNA16.1-201ENST00000516133 SYT17Q9BSW7 474 aa14.86□□□□□ -0.03
SCARNA16.1-201ENST00000516133 FHDC1Q9C0D6 1143 aaPredicted RBP14.86□□□□□ -0.03
SCARNA16.1-201ENST00000516133 PRKRIP1Q9H875 184 aaPredicted RBP14.86□□□□□ -0.03
SCARNA16.1-201ENST00000516133 MRC1P22897 1456 aa14.86□□□□□ -0.03
SCARNA16.1-201ENST00000516133 ZNF831Q5JPB2 1677 aa14.86□□□□□ -0.03
SCARNA16.1-201ENST00000516133 CEMIPQ8WUJ3 1361 aa14.85□□□□□ -0.03
SCARNA16.1-201ENST00000516133 ADAMTS7Q9UKP4 1686 aa14.85□□□□□ -0.03
SCARNA16.1-201ENST00000516133 ZNF790Q6PG37 636 aa14.85□□□□□ -0.03
SCARNA16.1-201ENST00000516133 PLEKHF1Q96S99 279 aa14.85□□□□□ -0.03
SCARNA16.1-201ENST00000516133 CRKLP46109 303 aaKnown RBP14.84□□□□□ -0.03
SCARNA16.1-201ENST00000516133 SMIM5Q71RC9 77 aa14.84□□□□□ -0.03
SCARNA16.1-201ENST00000516133 MAPK8IP3Q9UPT6 1336 aa14.84□□□□□ -0.03
SCARNA16.1-201ENST00000516133 TUBGCP6Q96RT7 1819 aa14.83□□□□□ -0.04
SCARNA16.1-201ENST00000516133 BTBD11A6QL63 1104 aa14.83□□□□□ -0.04
SCARNA16.1-201ENST00000516133 RFC4P35249 363 aa14.83□□□□□ -0.04
SCARNA16.1-201ENST00000516133 MSL1Q68DK7 614 aa14.83□□□□□ -0.04
SCARNA16.1-201ENST00000516133 MCM10Q7L590 875 aa14.83□□□□□ -0.04
SCARNA16.1-201ENST00000516133 DNAJC10Q8IXB1 793 aa14.83□□□□□ -0.04
SCARNA16.1-201ENST00000516133 NLGN1Q8N2Q7 840 aa14.83□□□□□ -0.04
SCARNA16.1-201ENST00000516133 ARHGEF1Q92888 912 aaKnown RBP14.83□□□□□ -0.04
SCARNA16.1-201ENST00000516133 TEX13AQ9BXU3 409 aaPredicted RBP14.83□□□□□ -0.04
SCARNA16.1-201ENST00000516133 STARD3NLO95772 234 aa14.82□□□□□ -0.04
SCARNA16.1-201ENST00000516133 CYP19A1P11511 503 aaPredicted RBP14.82□□□□□ -0.04
SCARNA16.1-201ENST00000516133 NFE2L2Q16236 605 aa14.82□□□□□ -0.04
SCARNA16.1-201ENST00000516133 INTS5Q6P9B9 1019 aaKnown RBP14.82□□□□□ -0.04
SCARNA16.1-201ENST00000516133 FMNL2Q96PY5 1086 aa14.82□□□□□ -0.04
SCARNA16.1-201ENST00000516133 CCDC87Q9NVE4 849 aa14.82□□□□□ -0.04
SCARNA16.1-201ENST00000516133 UBR3Q6ZT12 1888 aa14.82□□□□□ -0.04
SCARNA16.1-201ENST00000516133 WDR43Q15061 677 aaKnown RBP eCLIP14.81□□□□□ -0.04
SCARNA16.1-201ENST00000516133 TAF7Q15545 349 aaPredicted RBP14.81□□□□□ -0.04
SCARNA16.1-201ENST00000516133 ZNF496Q96IT1 587 aaPredicted RBP14.81□□□□□ -0.04
SCARNA16.1-201ENST00000516133 DCTN1Q14203 1278 aa14.8□□□□□ -0.04
SCARNA16.1-201ENST00000516133 COL24A1Q17RW2 1714 aa14.79□□□□□ -0.04
SCARNA16.1-201ENST00000516133 VIRMAQ69YN4 1812 aaKnown RBP14.79□□□□□ -0.04
SCARNA16.1-201ENST00000516133 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
SCARNA16.1-201ENST00000516133 PNISRQ8TF01 805 aaKnown RBP14.79□□□□□ -0.04
SCARNA16.1-201ENST00000516133 MYH14Q7Z406 1995 aaKnown RBP14.78□□□□□ -0.04
SCARNA16.1-201ENST00000516133 KCPQ6ZWJ8 1503 aa14.78□□□□□ -0.04
SCARNA16.1-201ENST00000516133 HEG1Q9ULI3 1381 aa14.78□□□□□ -0.04
SCARNA16.1-201ENST00000516133 CD2APQ9Y5K6 639 aa14.78□□□□□ -0.04
SCARNA16.1-201ENST00000516133 COL5A3P25940 1745 aaPredicted RBP14.78□□□□□ -0.04
SCARNA16.1-201ENST00000516133 GYS1P13807 737 aa14.77□□□□□ -0.05
SCARNA16.1-201ENST00000516133 RIPK4P57078 832 aa14.77□□□□□ -0.05
SCARNA16.1-201ENST00000516133 ADAMTS8Q9UP79 889 aa14.77□□□□□ -0.05
SCARNA16.1-201ENST00000516133 CICQ96RK0 1608 aaPredicted RBP14.77□□□□□ -0.05
SCARNA16.1-201ENST00000516133 SOS1Q07889 1333 aaPredicted RBP14.76□□□□□ -0.05
SCARNA16.1-201ENST00000516133 KCNQ3O43525 872 aa14.76□□□□□ -0.05
SCARNA16.1-201ENST00000516133 ZPR1O75312 459 aa14.76□□□□□ -0.05
SCARNA16.1-201ENST00000516133 MMP10P09238 476 aa14.76□□□□□ -0.05
SCARNA16.1-201ENST00000516133 SNRPA1P09661 255 aaKnown RBP14.76□□□□□ -0.05
SCARNA16.1-201ENST00000516133 TMPOP42166 694 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms