RNA–Protein interactions for RNA: ENST00000515943.1

RNU4-29P-201, Transcript of RNA, U4 small nuclear 29, pseudogene, humanhuman

BASIC

Gene RNU4-29P, Length 174 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-29P-201ENST00000515943 GMPRP36959 345 aa6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 WDR44Q5JSH3 913 aa6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 TAS1R3Q7RTX0 852 aa6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 TRIM50Q86XT4 487 aa6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 NANOS1Q8WY41 292 aaKnown RBP6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 PPP1R12CQ9BZL4 782 aa6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 ZMYND15Q9H091 742 aa6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 TFIP11Q9UBB9 837 aaKnown RBP6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 STK17AQ9UEE5 414 aa6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 ZNF777Q9ULD5 760 aaPredicted RBP6.53□□□□□ -1.36
RNU4-29P-201ENST00000515943 CLDN10P78369 228 aa6.52□□□□□ -1.37
RNU4-29P-201ENST00000515943 PSME1Q06323 249 aa6.52□□□□□ -1.37
RNU4-29P-201ENST00000515943 KIAA1024Q9UPX6 916 aa6.52□□□□□ -1.37
RNU4-29P-201ENST00000515943 DYRK1BQ9Y463 629 aa6.52□□□□□ -1.37
RNU4-29P-201ENST00000515943 ATP1A2P50993 1020 aa6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 SMTNP53814 917 aa6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 MTFR1Q15390 333 aa6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 C4orf17Q53FE4 359 aa6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 GNASQ5JWF2 1037 aa6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 PPARGC1BQ86YN6 1023 aaKnown RBP6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 RHBDD1Q8TEB9 315 aa6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 SLC4A9Q96Q91 983 aa6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 CUEDC1Q9NWM3 386 aaPredicted RBP6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 MKRN1Q9UHC7 482 aaKnown RBP6.51□□□□□ -1.37
RNU4-29P-201ENST00000515943 ZBTB7BO15156 539 aaPredicted RBP6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 TMEM214Q6NUQ4 689 aaKnown RBP6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 ZNF295-AS1Q8N0V1 137 aa6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 TPCN2Q8NHX9 752 aa6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 TIMMDC1Q9NPL8 285 aa6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 DNAAF2Q9NVR5 837 aaKnown RBP6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 ZNF358Q9NW07 568 aa6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 SERTAD1Q9UHV2 236 aa6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 IQSEC3Q9UPP2 1182 aaPredicted RBP6.5□□□□□ -1.37
RNU4-29P-201ENST00000515943 GTF2E1P29083 439 aaPredicted RBP6.49□□□□□ -1.37
RNU4-29P-201ENST00000515943 CFAP70Q5T0N1 1121 aa6.49□□□□□ -1.37
RNU4-29P-201ENST00000515943 SIX5Q8N196 739 aa6.49□□□□□ -1.37
RNU4-29P-201ENST00000515943 VWA5B2Q8N398 1253 aa6.49□□□□□ -1.37
RNU4-29P-201ENST00000515943 OGFOD1Q8N543 542 aa6.49□□□□□ -1.37
RNU4-29P-201ENST00000515943 GPR161Q8N6U8 529 aaKnown RBP6.49□□□□□ -1.37
RNU4-29P-201ENST00000515943 ZNF837Q96EG3 531 aaPredicted RBP6.49□□□□□ -1.37
RNU4-29P-201ENST00000515943 USP3Q9Y6I4 520 aa6.49□□□□□ -1.37
RNU4-29P-201ENST00000515943 A0A1B0GTH6 734 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 CDC14CA4D256 554 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 A6NJY4 79 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 BACH1O14867 736 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 DKK1O94907 266 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 PHKA2P46019 1235 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 EPHA4P54764 986 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 CCDC102BQ68D86 513 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 SV2AQ7L0J3 742 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 TRIM22Q8IYM9 498 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 LARGE2Q8N3Y3 721 aa6.48□□□□□ -1.37
RNU4-29P-201ENST00000515943 CDK2AP1O14519 115 aa6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 F11P03951 625 aa6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 LMOD1P29536 600 aaPredicted RBP6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 PLA2G4AP47712 749 aa6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 FOXK2Q01167 660 aa6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 KANK4Q5T7N3 995 aaPredicted RBP6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 GMCL1Q96IK5 515 aa6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 ZNF594Q96JF6 807 aaPredicted RBP6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 GAS2L1Q99501 681 aaPredicted RBP6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 NIFKQ9BYG3 293 aaKnown RBP6.47□□□□□ -1.37
RNU4-29P-201ENST00000515943 M0R2N6 131 aa6.46□□□□□ -1.38
RNU4-29P-201ENST00000515943 RASA1P20936 1047 aa6.46□□□□□ -1.38
RNU4-29P-201ENST00000515943 KRT76Q01546 638 aa6.46□□□□□ -1.38
RNU4-29P-201ENST00000515943 DBN1Q16643 649 aa6.46□□□□□ -1.38
RNU4-29P-201ENST00000515943 CRTC2Q53ET0 693 aaPredicted RBP6.46□□□□□ -1.38
RNU4-29P-201ENST00000515943 RIPOR1Q6ZS17 1223 aa6.46□□□□□ -1.38
RNU4-29P-201ENST00000515943 SCHIP1Q9P0W5 487 aaPredicted RBP6.46□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L15C9J2P7 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L10C9JJH3 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L13C9JLJ4 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L12C9JPN9 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L11C9JVI0 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L21D6R901 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L18D6R9N7 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L22D6RA61 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L17D6RBQ6 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L19D6RCP7 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L20D6RJB6 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 H7C1W4 665 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 THBS1P07996 1170 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 MSX1P28360 303 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 INSM1Q01101 510 aaPredicted RBP6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 USP17L24Q0WX57 530 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 RNFT1Q5M7Z0 435 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 TNS4Q8IZW8 715 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 COL25A1Q9BXS0 654 aaPredicted RBP6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 GPAMQ9HCL2 828 aa6.45□□□□□ -1.38
RNU4-29P-201ENST00000515943 FAM196BA6NMK8 535 aa6.44□□□□□ -1.38
RNU4-29P-201ENST00000515943 SFI1A8K8P3 1242 aa6.44□□□□□ -1.38
RNU4-29P-201ENST00000515943 ATP4AP20648 1035 aa6.44□□□□□ -1.38
RNU4-29P-201ENST00000515943 PTK7Q13308 1070 aa6.44□□□□□ -1.38
RNU4-29P-201ENST00000515943 LARP1Q6PKG0 1096 aaKnown RBP6.44□□□□□ -1.38
RNU4-29P-201ENST00000515943 SLC9A9Q8IVB4 645 aa6.44□□□□□ -1.38
RNU4-29P-201ENST00000515943 NUCKS1Q9H1E3 243 aaKnown RBP6.44□□□□□ -1.38
RNU4-29P-201ENST00000515943 GAS6Q14393 721 aa6.43□□□□□ -1.38
RNU4-29P-201ENST00000515943 LBRQ14739 615 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms