RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 IVNS1ABPQ9Y6Y0 642 aa11.38□□□□□ -0.59
SFXN1-211ENST00000515736 UBR1Q8IWV7 1749 aa11.38□□□□□ -0.59
SFXN1-211ENST00000515736 MED1Q15648 1581 aaPredicted RBP11.37□□□□□ -0.59
SFXN1-211ENST00000515736 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
SFXN1-211ENST00000515736 ATP9BO43861 1147 aa11.37□□□□□ -0.59
SFXN1-211ENST00000515736 DESI1Q6ICB0 168 aa11.37□□□□□ -0.59
SFXN1-211ENST00000515736 POTEHQ6S545 545 aa11.37□□□□□ -0.59
SFXN1-211ENST00000515736 MROH1Q8NDA8 1641 aa11.37□□□□□ -0.59
SFXN1-211ENST00000515736 MED14O60244 1454 aa11.37□□□□□ -0.59
SFXN1-211ENST00000515736 ERVK-7P63135 1459 aa11.37□□□□□ -0.59
SFXN1-211ENST00000515736 ARHGAP33O14559 1287 aa11.36□□□□□ -0.59
SFXN1-211ENST00000515736 ZNF428Q96B54 188 aa11.36□□□□□ -0.59
SFXN1-211ENST00000515736 NUP155O75694 1391 aa11.36□□□□□ -0.59
SFXN1-211ENST00000515736 LAMC1P11047 1609 aa11.35□□□□□ -0.59
SFXN1-211ENST00000515736 CCER2I3L3R5 266 aa11.35□□□□□ -0.59
SFXN1-211ENST00000515736 NR1H3Q13133 447 aa11.35□□□□□ -0.59
SFXN1-211ENST00000515736 POTEEQ6S8J3 1075 aa11.35□□□□□ -0.59
SFXN1-211ENST00000515736 SYNMO15061 1565 aa11.35□□□□□ -0.59
SFXN1-211ENST00000515736 RBM25P49756 843 aaKnown RBP11.34□□□□□ -0.59
SFXN1-211ENST00000515736 KMT5BQ4FZB7 885 aa11.34□□□□□ -0.59
SFXN1-211ENST00000515736 MORN1Q5T089 497 aa11.34□□□□□ -0.59
SFXN1-211ENST00000515736 L3MBTL2Q969R5 705 aa11.34□□□□□ -0.59
SFXN1-211ENST00000515736 RALGAPBQ86X10 1494 aa11.33□□□□□ -0.6
SFXN1-211ENST00000515736 DMRTA1Q5VZB9 504 aa11.33□□□□□ -0.6
SFXN1-211ENST00000515736 LYPD8Q6UX82 237 aa11.33□□□□□ -0.6
SFXN1-211ENST00000515736 SND1Q7KZF4 910 aaKnown RBP eCLIP11.33□□□□□ -0.6
SFXN1-211ENST00000515736 LAPTM4BQ86VI4 370 aa11.33□□□□□ -0.6
SFXN1-211ENST00000515736 SCAF11Q99590 1463 aaKnown RBP11.32□□□□□ -0.6
SFXN1-211ENST00000515736 PRDM15P57071 1507 aaPredicted RBP11.32□□□□□ -0.6
SFXN1-211ENST00000515736 ELOAQ14241 798 aaKnown RBP11.32□□□□□ -0.6
SFXN1-211ENST00000515736 CCDC27Q2M243 656 aa11.32□□□□□ -0.6
SFXN1-211ENST00000515736 VPS9D1Q9Y2B5 631 aa11.32□□□□□ -0.6
SFXN1-211ENST00000515736 SLC27A5Q9Y2P5 690 aa11.32□□□□□ -0.6
SFXN1-211ENST00000515736 SPATA31E1Q6ZUB1 1445 aa11.32□□□□□ -0.6
SFXN1-211ENST00000515736 PIK3C2BO00750 1634 aa11.31□□□□□ -0.6
SFXN1-211ENST00000515736 LRRC7Q96NW7 1537 aa11.31□□□□□ -0.6
SFXN1-211ENST00000515736 TET3O43151 1660 aa11.31□□□□□ -0.6
SFXN1-211ENST00000515736 ANP32CO43423 234 aa11.31□□□□□ -0.6
SFXN1-211ENST00000515736 RNF40O75150 1001 aa11.31□□□□□ -0.6
SFXN1-211ENST00000515736 FBXO45P0C2W1 286 aa11.31□□□□□ -0.6
SFXN1-211ENST00000515736 Q3C1V9 767 aa11.31□□□□□ -0.6
SFXN1-211ENST00000515736 ALKQ9UM73 1620 aa11.31□□□□□ -0.6
SFXN1-211ENST00000515736 PUS10Q3MIT2 529 aaKnown RBP11.3□□□□□ -0.6
SFXN1-211ENST00000515736 TXNDC2Q86VQ3 553 aa11.3□□□□□ -0.6
SFXN1-211ENST00000515736 GNEQ9Y223 722 aaKnown RBP11.3□□□□□ -0.6
SFXN1-211ENST00000515736 KANK1Q14678 1352 aa11.29□□□□□ -0.6
SFXN1-211ENST00000515736 SPHKAPQ2M3C7 1700 aa11.29□□□□□ -0.6
SFXN1-211ENST00000515736 PIK3CDO00329 1044 aa11.29□□□□□ -0.6
SFXN1-211ENST00000515736 ACTN4O43707 911 aaKnown RBP11.29□□□□□ -0.6
SFXN1-211ENST00000515736 DDX10Q13206 875 aaKnown RBP11.29□□□□□ -0.6
SFXN1-211ENST00000515736 NFATC2IPQ8NCF5 419 aa11.29□□□□□ -0.6
SFXN1-211ENST00000515736 EID1Q9Y6B2 187 aa11.29□□□□□ -0.6
SFXN1-211ENST00000515736 XIRP1Q702N8 1843 aaKnown RBP11.29□□□□□ -0.6
SFXN1-211ENST00000515736 TRPM1Q7Z4N2 1603 aa11.28□□□□□ -0.6
SFXN1-211ENST00000515736 CCDC144AA2RUR9 1427 aa11.28□□□□□ -0.6
SFXN1-211ENST00000515736 ZBBXA8MT70 800 aa11.28□□□□□ -0.6
SFXN1-211ENST00000515736 AXIN2Q9Y2T1 843 aa11.28□□□□□ -0.6
SFXN1-211ENST00000515736 SLIT1O75093 1534 aa11.28□□□□□ -0.6
SFXN1-211ENST00000515736 ARHGAP31Q2M1Z3 1444 aa11.27□□□□□ -0.6
SFXN1-211ENST00000515736 ARHGAP23Q9P227 1491 aa11.27□□□□□ -0.6
SFXN1-211ENST00000515736 HSPA5P11021 654 aaKnown RBP11.27□□□□□ -0.61
SFXN1-211ENST00000515736 B4GALNT3Q6L9W6 998 aa11.27□□□□□ -0.61
SFXN1-211ENST00000515736 NBPF3Q9H094 633 aa11.27□□□□□ -0.61
SFXN1-211ENST00000515736 FKBPLQ9UIM3 349 aa11.27□□□□□ -0.61
SFXN1-211ENST00000515736 ZMIZ1Q9ULJ6 1067 aa11.27□□□□□ -0.61
SFXN1-211ENST00000515736 AMOTL2Q9Y2J4 779 aa11.27□□□□□ -0.61
SFXN1-211ENST00000515736 E9PCH4 1651 aa11.27□□□□□ -0.61
SFXN1-211ENST00000515736 TRPM2O94759 1503 aa11.26□□□□□ -0.61
SFXN1-211ENST00000515736 LTKP29376 864 aa11.26□□□□□ -0.61
SFXN1-211ENST00000515736 RNF19BQ6ZMZ0 732 aa11.26□□□□□ -0.61
SFXN1-211ENST00000515736 ZFRQ96KR1 1074 aaKnown RBP11.26□□□□□ -0.61
SFXN1-211ENST00000515736 STAC3Q96MF2 364 aa11.26□□□□□ -0.61
SFXN1-211ENST00000515736 ROCK2O75116 1388 aaKnown RBP11.26□□□□□ -0.61
SFXN1-211ENST00000515736 CCDC7Q96M83 1385 aa11.26□□□□□ -0.61
SFXN1-211ENST00000515736 EFCAB6Q5THR3 1501 aa11.25□□□□□ -0.61
SFXN1-211ENST00000515736 KDM5AP29375 1690 aaKnown RBP11.25□□□□□ -0.61
SFXN1-211ENST00000515736 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
SFXN1-211ENST00000515736 PBX2P40425 430 aa11.25□□□□□ -0.61
SFXN1-211ENST00000515736 VARS2Q5ST30 1063 aaKnown RBP11.25□□□□□ -0.61
SFXN1-211ENST00000515736 TMEM164Q5U3C3 297 aa11.25□□□□□ -0.61
SFXN1-211ENST00000515736 USP17L3A6NCW0 530 aa11.24□□□□□ -0.61
SFXN1-211ENST00000515736 USP17L4A6NCW7 530 aa11.24□□□□□ -0.61
SFXN1-211ENST00000515736 F12P00748 615 aaPredicted RBP11.24□□□□□ -0.61
SFXN1-211ENST00000515736 BLOC1S3Q6QNY0 202 aa11.24□□□□□ -0.61
SFXN1-211ENST00000515736 USP17L2Q6R6M4 530 aa11.24□□□□□ -0.61
SFXN1-211ENST00000515736 USP17L1Q7RTZ2 530 aa11.24□□□□□ -0.61
SFXN1-211ENST00000515736 PLEKHM2Q8IWE5 1019 aa11.24□□□□□ -0.61
SFXN1-211ENST00000515736 STK32AQ8WU08 396 aa11.24□□□□□ -0.61
SFXN1-211ENST00000515736 YTHDC1Q96MU7 727 aaKnown RBP11.24□□□□□ -0.61
SFXN1-211ENST00000515736 USB1Q9BQ65 265 aaKnown RBP11.24□□□□□ -0.61
SFXN1-211ENST00000515736 ERBB3P21860 1342 aa11.24□□□□□ -0.61
SFXN1-211ENST00000515736 ZC3H4Q9UPT8 1303 aaKnown RBP11.24□□□□□ -0.61
SFXN1-211ENST00000515736 TMEM2Q9UHN6 1383 aa11.24□□□□□ -0.61
SFXN1-211ENST00000515736 KIAA1210Q9ULL0 1709 aa11.23□□□□□ -0.61
SFXN1-211ENST00000515736 E9PSI1 815 aa11.23□□□□□ -0.61
SFXN1-211ENST00000515736 SKIP12755 728 aa11.23□□□□□ -0.61
SFXN1-211ENST00000515736 NBPF8Q3BBV2 869 aa11.23□□□□□ -0.61
SFXN1-211ENST00000515736 NOVA2Q9UNW9 492 aaKnown RBP11.23□□□□□ -0.61
SFXN1-211ENST00000515736 SALL2Q9Y467 1007 aaPredicted RBP11.23□□□□□ -0.61
SFXN1-211ENST00000515736 USP17L5A8MUK1 530 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms