RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 KDM3BQ7LBC6 1761 aa25.57■■□□□ 1.68
TRIO-223ENST00000515710 HOXB7P09629 217 aa25.57■■□□□ 1.68
TRIO-223ENST00000515710 LARP1Q6PKG0 1096 aaKnown RBP25.57■■□□□ 1.68
TRIO-223ENST00000515710 SLC4A2P04920 1241 aa25.56■■□□□ 1.68
TRIO-223ENST00000515710 STK31Q9BXU1 1019 aa25.56■■□□□ 1.68
TRIO-223ENST00000515710 PARP4Q9UKK3 1724 aaKnown RBP25.55■■□□□ 1.68
TRIO-223ENST00000515710 DCAF5Q96JK2 942 aa25.55■■□□□ 1.68
TRIO-223ENST00000515710 BTG4Q9NY30 223 aa25.55■■□□□ 1.68
TRIO-223ENST00000515710 IL2RBP14784 551 aa25.55■■□□□ 1.68
TRIO-223ENST00000515710 PIP4K2BP78356 416 aa25.55■■□□□ 1.68
TRIO-223ENST00000515710 AEBP2Q6ZN18 517 aaPredicted RBP25.55■■□□□ 1.68
TRIO-223ENST00000515710 TSHZ2Q9NRE2 1034 aa25.55■■□□□ 1.68
TRIO-223ENST00000515710 CYP27B1O15528 508 aa25.54■■□□□ 1.68
TRIO-223ENST00000515710 ZCRB1Q8TBF4 217 aaKnown RBP25.54■■□□□ 1.68
TRIO-223ENST00000515710 VIRMAQ69YN4 1812 aaKnown RBP25.53■■□□□ 1.68
TRIO-223ENST00000515710 SLC52A2Q9HAB3 445 aa25.53■■□□□ 1.68
TRIO-223ENST00000515710 PCDHB15Q9Y5E8 787 aa25.53■■□□□ 1.68
TRIO-223ENST00000515710 KDM6AO15550 1401 aaPredicted RBP25.52■■□□□ 1.68
TRIO-223ENST00000515710 UBAP1LF5GYI3 381 aa25.52■■□□□ 1.68
TRIO-223ENST00000515710 ZBTB40Q9NUA8 1239 aa25.52■■□□□ 1.68
TRIO-223ENST00000515710 IGHDP01880 384 aa25.51■■□□□ 1.67
TRIO-223ENST00000515710 PCDH11XQ9BZA7 1347 aa25.51■■□□□ 1.67
TRIO-223ENST00000515710 PCDH11YQ9BZA8 1340 aa25.51■■□□□ 1.67
TRIO-223ENST00000515710 SIPA1L3O60292 1781 aaPredicted RBP25.51■■□□□ 1.67
TRIO-223ENST00000515710 SCN11AQ9UI33 1791 aa25.51■■□□□ 1.67
TRIO-223ENST00000515710 KCNQ3O43525 872 aa25.5■■□□□ 1.67
TRIO-223ENST00000515710 RWDD1Q9H446 243 aaPredicted RBP25.5■■□□□ 1.67
TRIO-223ENST00000515710 ZBTB7BO15156 539 aaPredicted RBP25.49■■□□□ 1.67
TRIO-223ENST00000515710 INTS3Q68E01 1043 aaKnown RBP25.49■■□□□ 1.67
TRIO-223ENST00000515710 HDGFL1Q5TGJ6 251 aa25.49■■□□□ 1.67
TRIO-223ENST00000515710 HEG1Q9ULI3 1381 aa25.48■■□□□ 1.67
TRIO-223ENST00000515710 ANP32EQ9BTT0 268 aa25.47■■□□□ 1.67
TRIO-223ENST00000515710 MRC1P22897 1456 aa25.47■■□□□ 1.67
TRIO-223ENST00000515710 RGS12O14924 1447 aa25.47■■□□□ 1.67
TRIO-223ENST00000515710 NKX1-1Q15270 411 aaPredicted RBP25.46■■□□□ 1.67
TRIO-223ENST00000515710 G2E3Q7L622 706 aa25.45■■□□□ 1.67
TRIO-223ENST00000515710 NFATC2IPQ8NCF5 419 aa25.45■■□□□ 1.67
TRIO-223ENST00000515710 ZNF790Q6PG37 636 aa25.44■■□□□ 1.66
TRIO-223ENST00000515710 GIGYF1O75420 1035 aaPredicted RBP25.43■■□□□ 1.66
TRIO-223ENST00000515710 CABP4P57796 275 aa25.43■■□□□ 1.66
TRIO-223ENST00000515710 FLIIQ13045 1269 aa25.43■■□□□ 1.66
TRIO-223ENST00000515710 HDAC1Q13547 482 aaPredicted RBP25.43■■□□□ 1.66
TRIO-223ENST00000515710 NECTIN2Q92692 538 aa25.43■■□□□ 1.66
TRIO-223ENST00000515710 CACNA1FO60840 1977 aa25.43■■□□□ 1.66
TRIO-223ENST00000515710 EIF2S2P20042 333 aaKnown RBP25.42■■□□□ 1.66
TRIO-223ENST00000515710 ERVV-2B6SEH9 535 aa25.41■■□□□ 1.66
TRIO-223ENST00000515710 ADAMTS2O95450 1211 aa25.41■■□□□ 1.66
TRIO-223ENST00000515710 USP35Q9P2H5 1018 aa25.41■■□□□ 1.66
TRIO-223ENST00000515710 CCT4P50991 539 aaKnown RBP25.4■■□□□ 1.66
TRIO-223ENST00000515710 FKBP5Q13451 457 aaPredicted RBP25.39■■□□□ 1.65
TRIO-223ENST00000515710 CERKQ8TCT0 537 aa25.39■■□□□ 1.65
TRIO-223ENST00000515710 DISP2A7MBM2 1401 aa25.38■■□□□ 1.65
TRIO-223ENST00000515710 SLC39A6Q13433 755 aa25.38■■□□□ 1.65
TRIO-223ENST00000515710 DDX54Q8TDD1 881 aaKnown RBP25.38■■□□□ 1.65
TRIO-223ENST00000515710 DBF4Q9UBU7 674 aaPredicted RBP25.38■■□□□ 1.65
TRIO-223ENST00000515710 NUTM2BA6NNL0 878 aaPredicted RBP25.37■■□□□ 1.65
TRIO-223ENST00000515710 NUTM2EB1AL46 878 aaPredicted RBP25.37■■□□□ 1.65
TRIO-223ENST00000515710 NUTM2AQ8IVF1 878 aaPredicted RBP25.37■■□□□ 1.65
TRIO-223ENST00000515710 TTC5Q8N0Z6 440 aa25.37■■□□□ 1.65
TRIO-223ENST00000515710 CHPF2Q9P2E5 772 aa25.37■■□□□ 1.65
TRIO-223ENST00000515710 PLCH1Q4KWH8 1693 aa25.36■■□□□ 1.65
TRIO-223ENST00000515710 JCADQ9P266 1359 aa25.36■■□□□ 1.65
TRIO-223ENST00000515710 SHANK3Q9BYB0 1731 aa25.36■■□□□ 1.65
TRIO-223ENST00000515710 THRAP3Q9Y2W1 955 aaKnown RBP25.35■■□□□ 1.65
TRIO-223ENST00000515710 F6X3S4 739 aa25.35■■□□□ 1.65
TRIO-223ENST00000515710 FMNL2Q96PY5 1086 aa25.35■■□□□ 1.65
TRIO-223ENST00000515710 CDCA7Q9BWT1 371 aaPredicted RBP25.35■■□□□ 1.65
TRIO-223ENST00000515710 SLC4A10Q6U841 1118 aa25.34■■□□□ 1.65
TRIO-223ENST00000515710 PHAXQ9H814 394 aaKnown RBP25.34■■□□□ 1.65
TRIO-223ENST00000515710 PXDNLA1KZ92 1463 aa25.33■■□□□ 1.65
TRIO-223ENST00000515710 NRAPQ86VF7 1730 aa25.32■■□□□ 1.64
TRIO-223ENST00000515710 SNRPA1P09661 255 aaKnown RBP25.32■■□□□ 1.64
TRIO-223ENST00000515710 ZNF496Q96IT1 587 aaPredicted RBP25.32■■□□□ 1.64
TRIO-223ENST00000515710 HYPKQ9NX55 129 aa25.31■■□□□ 1.64
TRIO-223ENST00000515710 SPATA31A1Q5TZJ5 1347 aa25.31■■□□□ 1.64
TRIO-223ENST00000515710 EXOC5O00471 708 aa25.31■■□□□ 1.64
TRIO-223ENST00000515710 SMC5Q8IY18 1101 aa25.31■■□□□ 1.64
TRIO-223ENST00000515710 SLIT2O94813 1529 aa25.31■■□□□ 1.64
TRIO-223ENST00000515710 PRAMEF22A3QJZ6 481 aa25.3■■□□□ 1.64
TRIO-223ENST00000515710 SKAP1Q86WV1 359 aa25.3■■□□□ 1.64
TRIO-223ENST00000515710 DDX21Q9NR30 783 aaKnown RBP eCLIP25.3■■□□□ 1.64
TRIO-223ENST00000515710 NWD2Q9ULI1 1742 aa25.3■■□□□ 1.64
TRIO-223ENST00000515710 PDZRN3Q9UPQ7 1066 aa25.29■■□□□ 1.64
TRIO-223ENST00000515710 C1orf115Q9H7X2 142 aa25.29■■□□□ 1.64
TRIO-223ENST00000515710 RBM19Q9Y4C8 960 aaKnown RBP25.29■■□□□ 1.64
TRIO-223ENST00000515710 RPAP2Q8IXW5 612 aaPredicted RBP25.28■■□□□ 1.64
TRIO-223ENST00000515710 GCC1Q96CN9 775 aa25.27■■□□□ 1.64
TRIO-223ENST00000515710 MEIS3Q99687 375 aa25.27■■□□□ 1.64
TRIO-223ENST00000515710 SPATA31A5Q5VU36 1347 aa25.26■■□□□ 1.63
TRIO-223ENST00000515710 SPATA31A7Q8IWB4 1347 aa25.26■■□□□ 1.63
TRIO-223ENST00000515710 RGS3P49796 1198 aa25.26■■□□□ 1.63
TRIO-223ENST00000515710 SPATA31A6Q5VVP1 1343 aa25.26■■□□□ 1.63
TRIO-223ENST00000515710 WNK3Q9BYP7 1800 aa25.26■■□□□ 1.63
TRIO-223ENST00000515710 GNAI3P08754 354 aa25.25■■□□□ 1.63
TRIO-223ENST00000515710 DNAAF4Q8WXU2 420 aa25.25■■□□□ 1.63
TRIO-223ENST00000515710 ANXA1P04083 346 aa25.25■■□□□ 1.63
TRIO-223ENST00000515710 PDIA6Q15084 440 aa25.25■■□□□ 1.63
TRIO-223ENST00000515710 ANKRD44Q8N8A2 993 aa25.25■■□□□ 1.63
TRIO-223ENST00000515710 TMOD3Q9NYL9 352 aa25.25■■□□□ 1.63
TRIO-223ENST00000515710 SIRT2Q8IXJ6 389 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms