RNA–Protein interactions for RNA: ENST00000515708.5

TSPAN17-209, Transcript of tetraspanin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN17, Length 2,361 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-209ENST00000515708 FMN2Q9NZ56 1722 aa20.57■□□□□ 0.88
TSPAN17-209ENST00000515708 NEK4P51957 841 aa20.56■□□□□ 0.88
TSPAN17-209ENST00000515708 TUBGCP6Q96RT7 1819 aa20.56■□□□□ 0.88
TSPAN17-209ENST00000515708 KDRP35968 1356 aa20.56■□□□□ 0.88
TSPAN17-209ENST00000515708 SSH2Q76I76 1423 aa20.56■□□□□ 0.88
TSPAN17-209ENST00000515708 TSHZ3Q63HK5 1081 aa20.56■□□□□ 0.88
TSPAN17-209ENST00000515708 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
TSPAN17-209ENST00000515708 TMX3Q96JJ7 454 aa20.55■□□□□ 0.88
TSPAN17-209ENST00000515708 ESYT1Q9BSJ8 1104 aa20.55■□□□□ 0.88
TSPAN17-209ENST00000515708 UBR1Q8IWV7 1749 aa20.55■□□□□ 0.88
TSPAN17-209ENST00000515708 STK31Q9BXU1 1019 aa20.54■□□□□ 0.88
TSPAN17-209ENST00000515708 LRRCC1Q9C099 1032 aa20.54■□□□□ 0.88
TSPAN17-209ENST00000515708 RBSNQ9H1K0 784 aa20.54■□□□□ 0.88
TSPAN17-209ENST00000515708 FLT4P35916 1363 aa20.54■□□□□ 0.88
TSPAN17-209ENST00000515708 MX1P20591 662 aa20.53■□□□□ 0.88
TSPAN17-209ENST00000515708 PRIM1P49642 420 aaKnown RBP20.53■□□□□ 0.88
TSPAN17-209ENST00000515708 SBNO1A3KN83 1393 aa20.53■□□□□ 0.88
TSPAN17-209ENST00000515708 MCM2P49736 904 aa20.53■□□□□ 0.88
TSPAN17-209ENST00000515708 CHAMP1Q96JM3 812 aa20.53■□□□□ 0.88
TSPAN17-209ENST00000515708 RBM27Q9P2N5 1060 aaKnown RBP20.53■□□□□ 0.88
TSPAN17-209ENST00000515708 ZMYND15Q9H091 742 aa20.52■□□□□ 0.88
TSPAN17-209ENST00000515708 PNMA6EA0A0J9YXQ4 647 aa20.52■□□□□ 0.88
TSPAN17-209ENST00000515708 GNAI3P08754 354 aa20.52■□□□□ 0.88
TSPAN17-209ENST00000515708 FLIIQ13045 1269 aa20.52■□□□□ 0.88
TSPAN17-209ENST00000515708 IGSF1Q8N6C5 1336 aa20.51■□□□□ 0.87
TSPAN17-209ENST00000515708 TTC21AQ8NDW8 1320 aa20.51■□□□□ 0.87
TSPAN17-209ENST00000515708 CEP170BQ9Y4F5 1589 aaPredicted RBP20.51■□□□□ 0.87
TSPAN17-209ENST00000515708 FKBP5Q13451 457 aaPredicted RBP20.51■□□□□ 0.87
TSPAN17-209ENST00000515708 EYA1Q99502 592 aa20.51■□□□□ 0.87
TSPAN17-209ENST00000515708 PALD1Q9ULE6 856 aa20.51■□□□□ 0.87
TSPAN17-209ENST00000515708 FAM208AQ9UK61 1670 aaKnown RBP20.51■□□□□ 0.87
TSPAN17-209ENST00000515708 XRN1Q8IZH2 1706 aaKnown RBP20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 MCCP23508 829 aa20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 PDLIM2Q96JY6 352 aa20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 TMEM63CQ9P1W3 806 aa20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 MSNP26038 577 aaKnown RBP20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 CHMLP26374 656 aa20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 ANAPC15P60006 121 aa20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 ATP8B2P98198 1209 aa20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 CUL4AQ13619 759 aa20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 HS1BP3Q53T59 392 aa20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 CCDC30Q5VVM6 783 aa20.5■□□□□ 0.87
TSPAN17-209ENST00000515708 FOXD4L5Q5VV16 416 aaPredicted RBP20.49■□□□□ 0.87
TSPAN17-209ENST00000515708 FOXD4L4Q8WXT5 416 aaPredicted RBP20.49■□□□□ 0.87
TSPAN17-209ENST00000515708 LRRC37A3O60309 1634 aa20.49■□□□□ 0.87
TSPAN17-209ENST00000515708 BRD1O95696 1058 aa20.49■□□□□ 0.87
TSPAN17-209ENST00000515708 ANO2Q9NQ90 1003 aa20.49■□□□□ 0.87
TSPAN17-209ENST00000515708 NSFL1CQ9UNZ2 370 aaKnown RBP20.49■□□□□ 0.87
TSPAN17-209ENST00000515708 RRP9O43818 475 aaKnown RBP20.48■□□□□ 0.87
TSPAN17-209ENST00000515708 LRSAM1Q6UWE0 723 aa20.48■□□□□ 0.87
TSPAN17-209ENST00000515708 RILPL2Q969X0 211 aa20.48■□□□□ 0.87
TSPAN17-209ENST00000515708 STAP2Q9UGK3 403 aa20.48■□□□□ 0.87
TSPAN17-209ENST00000515708 PLEKHG1Q9ULL1 1385 aa20.48■□□□□ 0.87
TSPAN17-209ENST00000515708 TRIM6-TRIM34B2RNG4 842 aa20.48■□□□□ 0.87
TSPAN17-209ENST00000515708 HTATSF1O43719 755 aaKnown RBP20.48■□□□□ 0.87
TSPAN17-209ENST00000515708 LTKP29376 864 aa20.47■□□□□ 0.87
TSPAN17-209ENST00000515708 AMPHP49418 695 aa20.47■□□□□ 0.87
TSPAN17-209ENST00000515708 HSP90AA2PQ14568 343 aaPredicted RBP20.47■□□□□ 0.87
TSPAN17-209ENST00000515708 VSIG10Q8N0Z9 540 aa20.47■□□□□ 0.87
TSPAN17-209ENST00000515708 INTS4Q96HW7 963 aaKnown RBP20.47■□□□□ 0.87
TSPAN17-209ENST00000515708 SRCIN1Q9C0H9 1055 aa20.47■□□□□ 0.87
TSPAN17-209ENST00000515708 SYCE3A1L190 88 aa20.46■□□□□ 0.87
TSPAN17-209ENST00000515708 MBD3O95983 291 aa20.46■□□□□ 0.87
TSPAN17-209ENST00000515708 TPM2P07951 284 aa20.46■□□□□ 0.87
TSPAN17-209ENST00000515708 PTPRUQ92729 1446 aa20.46■□□□□ 0.87
TSPAN17-209ENST00000515708 OFD1O75665 1012 aa20.46■□□□□ 0.87
TSPAN17-209ENST00000515708 IL17RAQ96F46 866 aa20.46■□□□□ 0.87
TSPAN17-209ENST00000515708 LRRFIP2Q9Y608 721 aaKnown RBP20.46■□□□□ 0.87
TSPAN17-209ENST00000515708 CACNA1FO60840 1977 aa20.45■□□□□ 0.86
TSPAN17-209ENST00000515708 KIAA1211Q6ZU35 1233 aa20.45■□□□□ 0.86
TSPAN17-209ENST00000515708 NECTIN2Q92692 538 aa20.45■□□□□ 0.86
TSPAN17-209ENST00000515708 UNC5CLQ8IV45 518 aa20.45■□□□□ 0.86
TSPAN17-209ENST00000515708 PODXL2Q9NZ53 605 aa20.45■□□□□ 0.86
TSPAN17-209ENST00000515708 NOL7Q9UMY1 257 aaKnown RBP20.45■□□□□ 0.86
TSPAN17-209ENST00000515708 N4BP2Q86UW6 1770 aaPredicted RBP20.45■□□□□ 0.86
TSPAN17-209ENST00000515708 GNAT3A8MTJ3 354 aa20.44■□□□□ 0.86
TSPAN17-209ENST00000515708 NOL8Q76FK4 1167 aaKnown RBP20.44■□□□□ 0.86
TSPAN17-209ENST00000515708 SLC26A8Q96RN1 970 aa20.43■□□□□ 0.86
TSPAN17-209ENST00000515708 AOX1Q06278 1338 aa20.43■□□□□ 0.86
TSPAN17-209ENST00000515708 PXDNLA1KZ92 1463 aa20.43■□□□□ 0.86
TSPAN17-209ENST00000515708 USP44Q9H0E7 712 aa20.43■□□□□ 0.86
TSPAN17-209ENST00000515708 SOS1Q07889 1333 aaPredicted RBP20.43■□□□□ 0.86
TSPAN17-209ENST00000515708 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.42■□□□□ 0.86
TSPAN17-209ENST00000515708 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
TSPAN17-209ENST00000515708 UPF3BQ9BZI7 483 aaKnown RBP20.42■□□□□ 0.86
TSPAN17-209ENST00000515708 PIK3C2AO00443 1686 aa20.42■□□□□ 0.86
TSPAN17-209ENST00000515708 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.41■□□□□ 0.86
TSPAN17-209ENST00000515708 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
TSPAN17-209ENST00000515708 IL17REQ8NFR9 667 aa20.41■□□□□ 0.86
TSPAN17-209ENST00000515708 IL25Q9H293 177 aa20.41■□□□□ 0.86
TSPAN17-209ENST00000515708 EPB41L2O43491 1005 aaKnown RBP20.4■□□□□ 0.86
TSPAN17-209ENST00000515708 SSH3Q8TE77 659 aa20.4■□□□□ 0.86
TSPAN17-209ENST00000515708 IL1RAPL2Q9NP60 686 aa20.4■□□□□ 0.86
TSPAN17-209ENST00000515708 RGPD8O14715 1765 aaPredicted RBP20.4■□□□□ 0.86
TSPAN17-209ENST00000515708 MAP3K5Q99683 1374 aa20.39■□□□□ 0.86
TSPAN17-209ENST00000515708 ZNF500O60304 480 aaPredicted RBP20.39■□□□□ 0.86
TSPAN17-209ENST00000515708 AMOTL2Q9Y2J4 779 aa20.39■□□□□ 0.85
TSPAN17-209ENST00000515708 HSPA4P34932 840 aa20.38■□□□□ 0.85
TSPAN17-209ENST00000515708 NWD1Q149M9 1564 aa20.38■□□□□ 0.85
TSPAN17-209ENST00000515708 TAF7Q15545 349 aaPredicted RBP20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms