RNA–Protein interactions for RNA: ENST00000515636.1

NEK11-216, Transcript of NIMA related kinase 11, humanhuman

TSL 2

Gene NEK11, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-216ENST00000515636 SIPA1L3O60292 1781 aaPredicted RBP15.36■□□□□ 0.05
NEK11-216ENST00000515636 UBR2Q8IWV8 1755 aa15.35■□□□□ 0.05
NEK11-216ENST00000515636 SGIP1Q9BQI5 828 aa15.35■□□□□ 0.05
NEK11-216ENST00000515636 MTHFSDQ2M296 383 aaKnown RBP15.34■□□□□ 0.05
NEK11-216ENST00000515636 PPP1R1BQ9UD71 204 aaPredicted RBP15.34■□□□□ 0.05
NEK11-216ENST00000515636 ATF5Q9Y2D1 282 aaPredicted RBP15.34■□□□□ 0.05
NEK11-216ENST00000515636 HMGB2P26583 209 aaKnown RBP15.33■□□□□ 0.04
NEK11-216ENST00000515636 CABP4P57796 275 aa15.33■□□□□ 0.04
NEK11-216ENST00000515636 ITPK1Q13572 414 aa15.32■□□□□ 0.04
NEK11-216ENST00000515636 LINC00116Q8NCU8 138 aa15.32■□□□□ 0.04
NEK11-216ENST00000515636 SLC16A10Q8TF71 515 aa15.32■□□□□ 0.04
NEK11-216ENST00000515636 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
NEK11-216ENST00000515636 MAP3K5Q99683 1374 aa15.32■□□□□ 0.04
NEK11-216ENST00000515636 C4AP0C0L4 1744 aa15.31■□□□□ 0.04
NEK11-216ENST00000515636 ATP6V1AP38606 617 aa15.31■□□□□ 0.04
NEK11-216ENST00000515636 AMIGO3Q86WK7 504 aa15.31■□□□□ 0.04
NEK11-216ENST00000515636 COL23A1Q86Y22 540 aaPredicted RBP15.31■□□□□ 0.04
NEK11-216ENST00000515636 NFATC2IPQ8NCF5 419 aa15.31■□□□□ 0.04
NEK11-216ENST00000515636 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
NEK11-216ENST00000515636 KCPQ6ZWJ8 1503 aa15.31■□□□□ 0.04
NEK11-216ENST00000515636 RNMTO43148 476 aaKnown RBP15.3■□□□□ 0.04
NEK11-216ENST00000515636 PRKAR2BP31323 418 aa15.3■□□□□ 0.04
NEK11-216ENST00000515636 DDX10Q13206 875 aaKnown RBP15.3■□□□□ 0.04
NEK11-216ENST00000515636 MYH14Q7Z406 1995 aaKnown RBP15.3■□□□□ 0.04
NEK11-216ENST00000515636 AK7Q96M32 723 aa15.3■□□□□ 0.04
NEK11-216ENST00000515636 SLC52A2Q9HAB3 445 aa15.3■□□□□ 0.04
NEK11-216ENST00000515636 NUDCQ9Y266 331 aa15.3■□□□□ 0.04
NEK11-216ENST00000515636 ZEB1P37275 1124 aaPredicted RBP15.29■□□□□ 0.04
NEK11-216ENST00000515636 GAS2L2Q8NHY3 880 aa15.29■□□□□ 0.04
NEK11-216ENST00000515636 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
NEK11-216ENST00000515636 DLG5Q8TDM6 1919 aa15.28■□□□□ 0.04
NEK11-216ENST00000515636 U2AF1L5P0DN76 240 aaPredicted RBP15.28■□□□□ 0.04
NEK11-216ENST00000515636 U2AF1Q01081 240 aaKnown RBP eCLIP15.28■□□□□ 0.04
NEK11-216ENST00000515636 SSFA2P28290 1259 aa15.27■□□□□ 0.04
NEK11-216ENST00000515636 FLAD1Q8NFF5 587 aa15.27■□□□□ 0.04
NEK11-216ENST00000515636 PHACTR3Q96KR7 559 aa15.27■□□□□ 0.04
NEK11-216ENST00000515636 RBM42Q9BTD8 480 aaKnown RBP15.27■□□□□ 0.04
NEK11-216ENST00000515636 CEMIPQ8WUJ3 1361 aa15.26■□□□□ 0.03
NEK11-216ENST00000515636 CNTNAP4Q9C0A0 1308 aa15.26■□□□□ 0.03
NEK11-216ENST00000515636 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.26■□□□□ 0.03
NEK11-216ENST00000515636 GNAT3A8MTJ3 354 aa15.26■□□□□ 0.03
NEK11-216ENST00000515636 GNPATO15228 680 aa15.26■□□□□ 0.03
NEK11-216ENST00000515636 MSH5O43196 834 aa15.26■□□□□ 0.03
NEK11-216ENST00000515636 PTCD1O75127 700 aaKnown RBP15.26■□□□□ 0.03
NEK11-216ENST00000515636 PHF14O94880 888 aa15.26■□□□□ 0.03
NEK11-216ENST00000515636 RALBP1Q15311 655 aa15.26■□□□□ 0.03
NEK11-216ENST00000515636 ARXQ96QS3 562 aa15.26■□□□□ 0.03
NEK11-216ENST00000515636 FHDC1Q9C0D6 1143 aaPredicted RBP15.26■□□□□ 0.03
NEK11-216ENST00000515636 FCHSD2O94868 740 aa15.25■□□□□ 0.03
NEK11-216ENST00000515636 POLD1P28340 1107 aa15.25■□□□□ 0.03
NEK11-216ENST00000515636 SMIM5Q71RC9 77 aa15.25■□□□□ 0.03
NEK11-216ENST00000515636 MSL1Q68DK7 614 aa15.24■□□□□ 0.03
NEK11-216ENST00000515636 IL17REQ8NFR9 667 aa15.24■□□□□ 0.03
NEK11-216ENST00000515636 MYBBP1AQ9BQG0 1328 aaKnown RBP15.23■□□□□ 0.03
NEK11-216ENST00000515636 SLC39A6Q13433 755 aa15.23■□□□□ 0.03
NEK11-216ENST00000515636 SYT17Q9BSW7 474 aa15.23■□□□□ 0.03
NEK11-216ENST00000515636 RC3H1Q5TC82 1133 aaKnown RBP15.22■□□□□ 0.03
NEK11-216ENST00000515636 TEFQ10587 303 aa15.21■□□□□ 0.03
NEK11-216ENST00000515636 RTCBQ9Y3I0 505 aaKnown RBP15.21■□□□□ 0.03
NEK11-216ENST00000515636 ADRA2BP18089 450 aa15.2■□□□□ 0.02
NEK11-216ENST00000515636 CRKLP46109 303 aaKnown RBP15.2■□□□□ 0.02
NEK11-216ENST00000515636 KDM3BQ7LBC6 1761 aa15.2■□□□□ 0.02
NEK11-216ENST00000515636 UTRNP46939 3433 aa15.19■□□□□ 0.02
NEK11-216ENST00000515636 RPS6KA4O75676 772 aa15.19■□□□□ 0.02
NEK11-216ENST00000515636 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
NEK11-216ENST00000515636 PLEKHF1Q96S99 279 aa15.19■□□□□ 0.02
NEK11-216ENST00000515636 KIF13BQ9NQT8 1826 aa15.19■□□□□ 0.02
NEK11-216ENST00000515636 ZNF790Q6PG37 636 aa15.18■□□□□ 0.02
NEK11-216ENST00000515636 TTC5Q8N0Z6 440 aa15.18■□□□□ 0.02
NEK11-216ENST00000515636 VSIG10Q8N0Z9 540 aa15.18■□□□□ 0.02
NEK11-216ENST00000515636 HEG1Q9ULI3 1381 aa15.18■□□□□ 0.02
NEK11-216ENST00000515636 LAMB4A4D0S4 1761 aa15.18■□□□□ 0.02
NEK11-216ENST00000515636 GOLGB1Q14789 3259 aaKnown RBP15.18■□□□□ 0.02
NEK11-216ENST00000515636 SCN7AQ01118 1682 aa15.17■□□□□ 0.02
NEK11-216ENST00000515636 TRAPPC3LQ5T215 181 aa15.17■□□□□ 0.02
NEK11-216ENST00000515636 INTS5Q6P9B9 1019 aaKnown RBP15.17■□□□□ 0.02
NEK11-216ENST00000515636 MCM10Q7L590 875 aa15.17■□□□□ 0.02
NEK11-216ENST00000515636 KLHL34Q8N239 644 aa15.17■□□□□ 0.02
NEK11-216ENST00000515636 RTF1Q92541 710 aaKnown RBP15.17■□□□□ 0.02
NEK11-216ENST00000515636 ARHGEF1Q92888 912 aaKnown RBP15.17■□□□□ 0.02
NEK11-216ENST00000515636 ZNF496Q96IT1 587 aaPredicted RBP15.17■□□□□ 0.02
NEK11-216ENST00000515636 PRKRIP1Q9H875 184 aaPredicted RBP15.17■□□□□ 0.02
NEK11-216ENST00000515636 KIAA1551Q9HCM1 1747 aa15.17■□□□□ 0.02
NEK11-216ENST00000515636 HTATSF1O43719 755 aaKnown RBP15.16■□□□□ 0.02
NEK11-216ENST00000515636 CYP19A1P11511 503 aaPredicted RBP15.16■□□□□ 0.02
NEK11-216ENST00000515636 CCDC87Q9NVE4 849 aa15.16■□□□□ 0.02
NEK11-216ENST00000515636 SOS1Q07889 1333 aaPredicted RBP15.16■□□□□ 0.02
NEK11-216ENST00000515636 NEFMP07197 916 aa15.15■□□□□ 0.02
NEK11-216ENST00000515636 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
NEK11-216ENST00000515636 NLGN2Q8NFZ4 835 aa15.15■□□□□ 0.02
NEK11-216ENST00000515636 MAPK8IP3Q9UPT6 1336 aa15.15■□□□□ 0.02
NEK11-216ENST00000515636 COL15A1P39059 1388 aa15.14■□□□□ 0.01
NEK11-216ENST00000515636 BTBD11A6QL63 1104 aa15.14■□□□□ 0.01
NEK11-216ENST00000515636 GYS1P13807 737 aa15.14■□□□□ 0.01
NEK11-216ENST00000515636 RFC4P35249 363 aa15.14■□□□□ 0.01
NEK11-216ENST00000515636 NFE2L2Q16236 605 aa15.14■□□□□ 0.01
NEK11-216ENST00000515636 PNNQ9H307 717 aaKnown RBP15.14■□□□□ 0.01
NEK11-216ENST00000515636 ZBTB1Q9Y2K1 713 aa15.14■□□□□ 0.01
NEK11-216ENST00000515636 USP42Q9H9J4 1324 aaKnown RBP15.14■□□□□ 0.01
NEK11-216ENST00000515636 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms