RNA–Protein interactions for RNA: ENST00000515391.5

CDK7-213, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 809 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-213ENST00000515391 ITPK1Q13572 414 aa17.6■□□□□ 0.41
CDK7-213ENST00000515391 MTHFSDQ2M296 383 aaKnown RBP17.6■□□□□ 0.41
CDK7-213ENST00000515391 LINC00116Q8NCU8 138 aa17.6■□□□□ 0.41
CDK7-213ENST00000515391 ATP6V1AP38606 617 aa17.59■□□□□ 0.41
CDK7-213ENST00000515391 AMIGO3Q86WK7 504 aa17.59■□□□□ 0.41
CDK7-213ENST00000515391 NFATC2IPQ8NCF5 419 aa17.59■□□□□ 0.41
CDK7-213ENST00000515391 LGR6Q9HBX8 967 aa17.59■□□□□ 0.41
CDK7-213ENST00000515391 C4BP0C0L5 1744 aa17.58■□□□□ 0.41
CDK7-213ENST00000515391 AKAP4Q5JQC9 854 aa17.58■□□□□ 0.4
CDK7-213ENST00000515391 SLC16A10Q8TF71 515 aa17.58■□□□□ 0.4
CDK7-213ENST00000515391 SLC4A9Q96Q91 983 aa17.58■□□□□ 0.4
CDK7-213ENST00000515391 RBM42Q9BTD8 480 aaKnown RBP17.58■□□□□ 0.4
CDK7-213ENST00000515391 AK7Q96M32 723 aa17.57■□□□□ 0.4
CDK7-213ENST00000515391 CFAP53Q96M91 514 aa17.57■□□□□ 0.4
CDK7-213ENST00000515391 SCN11AQ9UI33 1791 aa17.56■□□□□ 0.4
CDK7-213ENST00000515391 PHF14O94880 888 aa17.56■□□□□ 0.4
CDK7-213ENST00000515391 MSL1Q68DK7 614 aa17.56■□□□□ 0.4
CDK7-213ENST00000515391 ARXQ96QS3 562 aa17.56■□□□□ 0.4
CDK7-213ENST00000515391 FHDC1Q9C0D6 1143 aaPredicted RBP17.56■□□□□ 0.4
CDK7-213ENST00000515391 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
CDK7-213ENST00000515391 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
CDK7-213ENST00000515391 PTCD1O75127 700 aaKnown RBP17.54■□□□□ 0.4
CDK7-213ENST00000515391 VIRMAQ69YN4 1812 aaKnown RBP17.54■□□□□ 0.4
CDK7-213ENST00000515391 UBR3Q6ZT12 1888 aa17.53■□□□□ 0.4
CDK7-213ENST00000515391 PRKAR2BP31323 418 aa17.53■□□□□ 0.4
CDK7-213ENST00000515391 KLHL34Q8N239 644 aa17.53■□□□□ 0.4
CDK7-213ENST00000515391 PHACTR3Q96KR7 559 aa17.53■□□□□ 0.4
CDK7-213ENST00000515391 SYT17Q9BSW7 474 aa17.53■□□□□ 0.4
CDK7-213ENST00000515391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.52■□□□□ 0.4
CDK7-213ENST00000515391 GNPATO15228 680 aa17.52■□□□□ 0.4
CDK7-213ENST00000515391 U2AF1L5P0DN76 240 aaPredicted RBP17.52■□□□□ 0.4
CDK7-213ENST00000515391 POLD1P28340 1107 aa17.52■□□□□ 0.4
CDK7-213ENST00000515391 U2AF1Q01081 240 aaKnown RBP eCLIP17.52■□□□□ 0.4
CDK7-213ENST00000515391 RSPH6AQ9H0K4 717 aa17.52■□□□□ 0.4
CDK7-213ENST00000515391 SLC52A2Q9HAB3 445 aa17.52■□□□□ 0.4
CDK7-213ENST00000515391 NUDCQ9Y266 331 aa17.52■□□□□ 0.4
CDK7-213ENST00000515391 COL24A1Q17RW2 1714 aa17.52■□□□□ 0.39
CDK7-213ENST00000515391 SLC39A6Q13433 755 aa17.51■□□□□ 0.39
CDK7-213ENST00000515391 FLAD1Q8NFF5 587 aa17.51■□□□□ 0.39
CDK7-213ENST00000515391 HMGB2P26583 209 aaKnown RBP17.5■□□□□ 0.39
CDK7-213ENST00000515391 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
CDK7-213ENST00000515391 GAS2L2Q8NHY3 880 aa17.49■□□□□ 0.39
CDK7-213ENST00000515391 GNAT3A8MTJ3 354 aa17.48■□□□□ 0.39
CDK7-213ENST00000515391 SSFA2P28290 1259 aa17.48■□□□□ 0.39
CDK7-213ENST00000515391 ADAMTS7Q9UKP4 1686 aa17.48■□□□□ 0.39
CDK7-213ENST00000515391 COL5A3P25940 1745 aaPredicted RBP17.47■□□□□ 0.39
CDK7-213ENST00000515391 MAP3K5Q99683 1374 aa17.47■□□□□ 0.39
CDK7-213ENST00000515391 MRC1P22897 1456 aa17.47■□□□□ 0.39
CDK7-213ENST00000515391 ZNF831Q5JPB2 1677 aa17.47■□□□□ 0.39
CDK7-213ENST00000515391 MYH14Q7Z406 1995 aaKnown RBP17.46■□□□□ 0.39
CDK7-213ENST00000515391 DNAJC10Q8IXB1 793 aa17.46■□□□□ 0.39
CDK7-213ENST00000515391 RTCBQ9Y3I0 505 aaKnown RBP17.46■□□□□ 0.39
CDK7-213ENST00000515391 TJP1Q07157 1748 aa17.46■□□□□ 0.39
CDK7-213ENST00000515391 FCHSD2O94868 740 aa17.45■□□□□ 0.38
CDK7-213ENST00000515391 RC3H1Q5TC82 1133 aaKnown RBP17.45■□□□□ 0.38
CDK7-213ENST00000515391 NLGN2Q8NFZ4 835 aa17.45■□□□□ 0.38
CDK7-213ENST00000515391 CNTNAP4Q9C0A0 1308 aa17.45■□□□□ 0.38
CDK7-213ENST00000515391 DCAF8L1A6NGE4 600 aa17.44■□□□□ 0.38
CDK7-213ENST00000515391 RPS6KA4O75676 772 aa17.44■□□□□ 0.38
CDK7-213ENST00000515391 CRKLP46109 303 aaKnown RBP17.44■□□□□ 0.38
CDK7-213ENST00000515391 TRAPPC3LQ5T215 181 aa17.44■□□□□ 0.38
CDK7-213ENST00000515391 ARHGEF1Q92888 912 aaKnown RBP17.44■□□□□ 0.38
CDK7-213ENST00000515391 TEFQ10587 303 aa17.43■□□□□ 0.38
CDK7-213ENST00000515391 KCPQ6ZWJ8 1503 aa17.42■□□□□ 0.38
CDK7-213ENST00000515391 RALBP1Q15311 655 aa17.42■□□□□ 0.38
CDK7-213ENST00000515391 INTS5Q6P9B9 1019 aaKnown RBP17.42■□□□□ 0.38
CDK7-213ENST00000515391 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
CDK7-213ENST00000515391 DCTN1Q14203 1278 aa17.41■□□□□ 0.38
CDK7-213ENST00000515391 MCM10Q7L590 875 aa17.41■□□□□ 0.38
CDK7-213ENST00000515391 KCNQ3O43525 872 aa17.4■□□□□ 0.38
CDK7-213ENST00000515391 SIPA1L3O60292 1781 aaPredicted RBP17.4■□□□□ 0.38
CDK7-213ENST00000515391 CEMIPQ8WUJ3 1361 aa17.4■□□□□ 0.38
CDK7-213ENST00000515391 CYP19A1P11511 503 aaPredicted RBP17.39■□□□□ 0.37
CDK7-213ENST00000515391 RFC4P35249 363 aa17.39■□□□□ 0.37
CDK7-213ENST00000515391 PELP1Q8IZL8 1130 aaKnown RBP17.39■□□□□ 0.37
CDK7-213ENST00000515391 TTC5Q8N0Z6 440 aa17.39■□□□□ 0.37
CDK7-213ENST00000515391 ZNF496Q96IT1 587 aaPredicted RBP17.39■□□□□ 0.37
CDK7-213ENST00000515391 SRP68Q9UHB9 627 aaKnown RBP17.39■□□□□ 0.37
CDK7-213ENST00000515391 CICQ96RK0 1608 aaPredicted RBP17.39■□□□□ 0.37
CDK7-213ENST00000515391 UBR2Q8IWV8 1755 aa17.38■□□□□ 0.37
CDK7-213ENST00000515391 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
CDK7-213ENST00000515391 ZNF790Q6PG37 636 aa17.38■□□□□ 0.37
CDK7-213ENST00000515391 CCDC87Q9NVE4 849 aa17.38■□□□□ 0.37
CDK7-213ENST00000515391 C4AP0C0L4 1744 aa17.38■□□□□ 0.37
CDK7-213ENST00000515391 MMP10P09238 476 aa17.37■□□□□ 0.37
CDK7-213ENST00000515391 GYS1P13807 737 aa17.37■□□□□ 0.37
CDK7-213ENST00000515391 GPR162Q16538 588 aa17.37■□□□□ 0.37
CDK7-213ENST00000515391 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
CDK7-213ENST00000515391 PLEKHF1Q96S99 279 aa17.37■□□□□ 0.37
CDK7-213ENST00000515391 ZBTB1Q9Y2K1 713 aa17.37■□□□□ 0.37
CDK7-213ENST00000515391 BTBD11A6QL63 1104 aa17.36■□□□□ 0.37
CDK7-213ENST00000515391 MYBBP1AQ9BQG0 1328 aaKnown RBP17.36■□□□□ 0.37
CDK7-213ENST00000515391 YY1P25490 414 aa17.35■□□□□ 0.37
CDK7-213ENST00000515391 CANXP27824 592 aaKnown RBP17.35■□□□□ 0.37
CDK7-213ENST00000515391 VSIG10Q8N0Z9 540 aa17.35■□□□□ 0.37
CDK7-213ENST00000515391 NLGN1Q8N2Q7 840 aa17.35■□□□□ 0.37
CDK7-213ENST00000515391 CD2APQ9Y5K6 639 aa17.35■□□□□ 0.37
CDK7-213ENST00000515391 HEG1Q9ULI3 1381 aa17.35■□□□□ 0.37
CDK7-213ENST00000515391 DLG5Q8TDM6 1919 aa17.35■□□□□ 0.37
CDK7-213ENST00000515391 NEFMP07197 916 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms