RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 ANO2Q9NQ90 1003 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 DNMT3AQ9Y6K1 912 aaPredicted RBP6.79□□□□□ -1.32
HERC6-208ENST00000515365 UNCXA6NJT0 531 aa6.78□□□□□ -1.32
HERC6-208ENST00000515365 INHAP05111 366 aa6.78□□□□□ -1.32
HERC6-208ENST00000515365 FKBP4Q02790 459 aaKnown RBP eCLIP6.78□□□□□ -1.32
HERC6-208ENST00000515365 NR5A1Q13285 461 aa6.78□□□□□ -1.32
HERC6-208ENST00000515365 SF3B2Q13435 895 aaKnown RBP6.78□□□□□ -1.32
HERC6-208ENST00000515365 CCDC116Q8IYX3 515 aa6.78□□□□□ -1.32
HERC6-208ENST00000515365 TNS4Q8IZW8 715 aa6.78□□□□□ -1.32
HERC6-208ENST00000515365 GAS2L2Q8NHY3 880 aa6.78□□□□□ -1.32
HERC6-208ENST00000515365 ETNK1Q9HBU6 452 aa6.78□□□□□ -1.32
HERC6-208ENST00000515365 MYT1Q01538 1121 aa6.77□□□□□ -1.33
HERC6-208ENST00000515365 PPP1R26Q5T8A7 1209 aaPredicted RBP6.77□□□□□ -1.33
HERC6-208ENST00000515365 CYP2U1Q7Z449 544 aa6.77□□□□□ -1.33
HERC6-208ENST00000515365 SCG3Q8WXD2 468 aaKnown RBP6.77□□□□□ -1.33
HERC6-208ENST00000515365 SLC4A9Q96Q91 983 aa6.77□□□□□ -1.33
HERC6-208ENST00000515365 ANKRD33BA6NCL7 494 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 WNT7AO00755 349 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 GNRH1P01148 92 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 NR3C2P08235 984 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 FOXK2Q01167 660 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 MTMR3Q13615 1198 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 NPAS4Q8IUM7 802 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 HELQQ8TDG4 1101 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 TSPAN10Q9H1Z9 355 aaPredicted RBP6.76□□□□□ -1.33
HERC6-208ENST00000515365 SERTAD1Q9UHV2 236 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 ATAD2Q6PL18 1390 aa6.76□□□□□ -1.33
HERC6-208ENST00000515365 ADD1P35611 737 aaKnown RBP6.75□□□□□ -1.33
HERC6-208ENST00000515365 ARHGAP4P98171 946 aa6.75□□□□□ -1.33
HERC6-208ENST00000515365 NAA30Q147X3 362 aaPredicted RBP6.75□□□□□ -1.33
HERC6-208ENST00000515365 ESCO1Q5FWF5 840 aa6.75□□□□□ -1.33
HERC6-208ENST00000515365 MRGPRX2Q96LB1 330 aa6.75□□□□□ -1.33
HERC6-208ENST00000515365 DCTN4Q9UJW0 460 aa6.75□□□□□ -1.33
HERC6-208ENST00000515365 NPR3P17342 541 aa6.74□□□□□ -1.33
HERC6-208ENST00000515365 MTFR1Q15390 333 aa6.74□□□□□ -1.33
HERC6-208ENST00000515365 FBXO41Q8TF61 875 aa6.74□□□□□ -1.33
HERC6-208ENST00000515365 BCL2L13Q9BXK5 485 aa6.74□□□□□ -1.33
HERC6-208ENST00000515365 SCHIP1Q9P0W5 487 aaPredicted RBP6.74□□□□□ -1.33
HERC6-208ENST00000515365 EMILIN1Q9Y6C2 1016 aa6.74□□□□□ -1.33
HERC6-208ENST00000515365 A0A1W2PRU2 124 aa6.73□□□□□ -1.33
HERC6-208ENST00000515365 ZNF16P17020 682 aaPredicted RBP6.73□□□□□ -1.33
HERC6-208ENST00000515365 MAPK1P28482 360 aa6.73□□□□□ -1.33
HERC6-208ENST00000515365 STAG2Q8N3U4 1231 aa6.73□□□□□ -1.33
HERC6-208ENST00000515365 ASB16Q96NS5 453 aa6.73□□□□□ -1.33
HERC6-208ENST00000515365 PGPEP1Q9NXJ5 209 aa6.73□□□□□ -1.33
HERC6-208ENST00000515365 A6NJY4 79 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 PPP1R12BO60237 982 aaPredicted RBP6.72□□□□□ -1.33
HERC6-208ENST00000515365 IL2RAP01589 272 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 SLC19A1P41440 591 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 SMTNP53814 917 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 SLC9A9Q8IVB4 645 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 SPNS2Q8IVW8 549 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 CHMP7Q8WUX9 453 aaPredicted RBP6.72□□□□□ -1.33
HERC6-208ENST00000515365 VTI1AQ96AJ9 217 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 XAGE2Q96GT9 111 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 ARHGEF10LQ9HCE6 1279 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 RAB6BQ9NRW1 208 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 KIAA1522Q9P206 1035 aaPredicted RBP6.72□□□□□ -1.33
HERC6-208ENST00000515365 HRH3Q9Y5N1 445 aa6.72□□□□□ -1.33
HERC6-208ENST00000515365 FAM13AO94988 1023 aa6.71□□□□□ -1.34
HERC6-208ENST00000515365 TBCELQ5QJ74 424 aa6.71□□□□□ -1.34
HERC6-208ENST00000515365 IFFO2Q5TF58 517 aa6.71□□□□□ -1.34
HERC6-208ENST00000515365 C16orf46Q6P387 395 aa6.71□□□□□ -1.34
HERC6-208ENST00000515365 FBXO33Q7Z6M2 555 aa6.71□□□□□ -1.34
HERC6-208ENST00000515365 GIPC2Q8TF65 315 aa6.71□□□□□ -1.34
HERC6-208ENST00000515365 C2orf49Q9BVC5 232 aaPredicted RBP6.71□□□□□ -1.34
HERC6-208ENST00000515365 SAP130Q9H0E3 1048 aa6.71□□□□□ -1.34
HERC6-208ENST00000515365 CDK2AP1O14519 115 aa6.7□□□□□ -1.34
HERC6-208ENST00000515365 ADH1AP07327 375 aa6.7□□□□□ -1.34
HERC6-208ENST00000515365 PSMA6P60900 246 aaKnown RBP6.7□□□□□ -1.34
HERC6-208ENST00000515365 NNTQ13423 1086 aa6.7□□□□□ -1.34
HERC6-208ENST00000515365 SPRYD7Q5W111 196 aa6.7□□□□□ -1.34
HERC6-208ENST00000515365 POTEAQ6S8J7 498 aa6.7□□□□□ -1.34
HERC6-208ENST00000515365 ZSCAN29Q8IWY8 852 aaPredicted RBP6.7□□□□□ -1.34
HERC6-208ENST00000515365 KDF1Q8NAX2 398 aaPredicted RBP6.7□□□□□ -1.34
HERC6-208ENST00000515365 MRRFQ96E11 262 aaKnown RBP6.7□□□□□ -1.34
HERC6-208ENST00000515365 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.7□□□□□ -1.34
HERC6-208ENST00000515365 IGSF5Q9NSI5 407 aa6.7□□□□□ -1.34
HERC6-208ENST00000515365 IQSEC3Q9UPP2 1182 aaPredicted RBP6.7□□□□□ -1.34
HERC6-208ENST00000515365 USP3Q9Y6I4 520 aa6.7□□□□□ -1.34
HERC6-208ENST00000515365 TNFRSF10BO14763 440 aa6.69□□□□□ -1.34
HERC6-208ENST00000515365 MPSTP25325 297 aa6.69□□□□□ -1.34
HERC6-208ENST00000515365 COL19A1Q14993 1142 aa6.69□□□□□ -1.34
HERC6-208ENST00000515365 TLR1Q15399 786 aa6.69□□□□□ -1.34
HERC6-208ENST00000515365 RGL4Q8IZJ4 473 aa6.69□□□□□ -1.34
HERC6-208ENST00000515365 CNKSR1Q969H4 720 aa6.69□□□□□ -1.34
HERC6-208ENST00000515365 ESYT1Q9BSJ8 1104 aa6.69□□□□□ -1.34
HERC6-208ENST00000515365 RBCK1Q9BYM8 510 aa6.69□□□□□ -1.34
HERC6-208ENST00000515365 ALDH1A1P00352 501 aa6.68□□□□□ -1.34
HERC6-208ENST00000515365 CLN3Q13286 438 aa6.68□□□□□ -1.34
HERC6-208ENST00000515365 COX20Q5RI15 118 aa6.68□□□□□ -1.34
HERC6-208ENST00000515365 QTRT2Q9H974 415 aaKnown RBP6.68□□□□□ -1.34
HERC6-208ENST00000515365 HIRAP54198 1017 aaPredicted RBP6.67□□□□□ -1.34
HERC6-208ENST00000515365 CBLBQ13191 982 aa6.67□□□□□ -1.34
HERC6-208ENST00000515365 TEAD4Q15561 434 aa6.67□□□□□ -1.34
HERC6-208ENST00000515365 ZNF326Q5BKZ1 582 aaKnown RBP6.67□□□□□ -1.34
HERC6-208ENST00000515365 ZNF697Q5TEC3 545 aa6.67□□□□□ -1.34
HERC6-208ENST00000515365 Q6ZVU0 165 aa6.67□□□□□ -1.34
HERC6-208ENST00000515365 ZNF295-AS1Q8N0V1 137 aa6.67□□□□□ -1.34
HERC6-208ENST00000515365 NBPF15Q8N660 670 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms